CK936034
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARF11_CAEEL (ADP-ribosylation factor 1-like 1 OS=Caenorhabditis elegans GN=arf-1.1 PE=3 SV=3) HSP 1 Score: 160.229 bits (404), Expect = 3.817e-48 Identity = 77/132 (58.33%), Postives = 98/132 (74.24%), Query Frame = 2 Query: 140 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 535 IPTIGFNVETV ++ I+ TVWDVGGQ KIR LW++YF N L+FVVDS+D +R+ EA++EL +L E EL D+ LLVFANK D+PNA + AE+T L L SL+ R W+I T A SG+GLYEGL W+ + Sbjct: 46 IPTIGFNVETVTFQKITLTVWDVGGQKKIRALWKYYFPNTTTLVFVVDSSDIERIPEAKEELFSLLAEPELADSHLLVFANKQDMPNARSPAELTQLLDLGSLKNREWFICGTNAHSGQGLYEGLMWVKKQM 177 HSP 2 Score: 52.7582 bits (125), Expect = 3.817e-48 Identity = 27/43 (62.79%), Postives = 31/43 (72.09%), Query Frame = 1 Query: 4 MGLSFTKLFSRLFAKKEMRILMVGLDAPGKTTILYKLKLGEIV 132 MGL F+K+ S +F E R LM+GLD GKTTILYKLKL E V Sbjct: 1 MGLFFSKISSFMFPNIECRTLMLGLDGAGKTTILYKLKLNETV 43
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARL1_HUMAN (ADP-ribosylation factor-like protein 1 OS=Homo sapiens GN=ARL1 PE=1 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 1.436e-47 Identity = 72/135 (53.33%), Postives = 95/135 (70.37%), Query Frame = 2 Query: 140 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 544 IPTIGFNVETV YKN+ F VWD+GGQ IRP WR Y+ N +I+VVDS DRDR+ ++ EL ML E+ELR A+L+VFANK D+ AM ++E+ + LGL +L+ R W I T AT G GL E ++WL + ++ Sbjct: 46 IPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTSSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSR 180 HSP 2 Score: 56.9954 bits (136), Expect = 1.436e-47 Identity = 26/43 (60.47%), Postives = 35/43 (81.40%), Query Frame = 1 Query: 4 MGLSFTKLFSRLFAKKEMRILMVGLDAPGKTTILYKLKLGEIV 132 MG F+ +FS LF +EMRIL++GLD GKTTILY+L++GE+V Sbjct: 1 MGGFFSSIFSSLFGTREMRILILGLDGAGKTTILYRLQVGEVV 43
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARD1_RAT (GTP-binding protein ARD-1 (Fragment) OS=Rattus norvegicus GN=Trim23 PE=2 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 2.403e-47 Identity = 82/133 (61.65%), Postives = 101/133 (75.94%), Query Frame = 2 Query: 140 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSL-RQRHWYIQSTCATSGEGLYEGLDWLSNNI 535 IPTIGFNVETVEYKN+ FT+WDVG + K+RPLW+HY+ N Q ++FVVDS+ RDR+ EA EL ++L E ELRDA+LL+FANK D+ A++ EIT+ L LH L R WYIQ A SG GLYEGLDWLS + Sbjct: 413 IPTIGFNVETVEYKNLKFTIWDVGEKHKLRPLWKHYYLNTQAVVFVVDSSHRDRISEAHSELAKLLTEKELRDALLLIFANKQDVAGALSVEEITELLSLHKLCCGRSWYIQGCDARSGMGLYEGLDWLSRQL 545 HSP 2 Score: 36.5798 bits (83), Expect = 2.403e-47 Identity = 16/29 (55.17%), Postives = 22/29 (75.86%), Query Frame = 1 Query: 46 KKEMRILMVGLDAPGKTTILYKLKLGEIV 132 K E+R++ +GLD GKTTIL+KLK E + Sbjct: 382 KMEIRVVTLGLDGAGKTTILFKLKQDEFM 410
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARL1_BOVIN (ADP-ribosylation factor-like protein 1 OS=Bos taurus GN=ARL1 PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 2.439e-47 Identity = 72/135 (53.33%), Postives = 94/135 (69.63%), Query Frame = 2 Query: 140 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 544 IPTIGFNVETV YKN+ F VWD+GGQ IRP WR Y+ N +I+VVDS DRDR+ ++ EL ML E+ELR A+L+VFANK D+ AM +E+ + LGL +L+ R W I T AT G GL E ++WL + ++ Sbjct: 46 IPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTPSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSR 180 HSP 2 Score: 56.9954 bits (136), Expect = 2.439e-47 Identity = 26/43 (60.47%), Postives = 35/43 (81.40%), Query Frame = 1 Query: 4 MGLSFTKLFSRLFAKKEMRILMVGLDAPGKTTILYKLKLGEIV 132 MG F+ +FS LF +EMRIL++GLD GKTTILY+L++GE+V Sbjct: 1 MGGFFSSIFSSLFGTREMRILILGLDGAGKTTILYRLQVGEVV 43
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARL1_RAT (ADP-ribosylation factor-like protein 1 OS=Rattus norvegicus GN=Arl1 PE=1 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 3.179e-47 Identity = 72/135 (53.33%), Postives = 94/135 (69.63%), Query Frame = 2 Query: 140 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 544 IPTIGFNVETV YKN+ F VWD+GGQ IRP WR Y+ N +I+VVDS DRDR+ ++ EL ML E+ELR A+L+VFANK D+ AM +E+ + LGL +L+ R W I T AT G GL E ++WL + ++ Sbjct: 46 IPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTPSEMANALGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSR 180 HSP 2 Score: 56.9954 bits (136), Expect = 3.179e-47 Identity = 26/43 (60.47%), Postives = 35/43 (81.40%), Query Frame = 1 Query: 4 MGLSFTKLFSRLFAKKEMRILMVGLDAPGKTTILYKLKLGEIV 132 MG F+ +FS LF +EMRIL++GLD GKTTILY+L++GE+V Sbjct: 1 MGGFFSSIFSSLFGTREMRILILGLDGAGKTTILYRLQVGEVV 43
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARL1_MOUSE (ADP-ribosylation factor-like protein 1 OS=Mus musculus GN=Arl1 PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 3.179e-47 Identity = 72/135 (53.33%), Postives = 94/135 (69.63%), Query Frame = 2 Query: 140 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 544 IPTIGFNVETV YKN+ F VWD+GGQ IRP WR Y+ N +I+VVDS DRDR+ ++ EL ML E+ELR A+L+VFANK D+ AM +E+ + LGL +L+ R W I T AT G GL E ++WL + ++ Sbjct: 46 IPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTPSEMANALGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSR 180 HSP 2 Score: 56.9954 bits (136), Expect = 3.179e-47 Identity = 26/43 (60.47%), Postives = 35/43 (81.40%), Query Frame = 1 Query: 4 MGLSFTKLFSRLFAKKEMRILMVGLDAPGKTTILYKLKLGEIV 132 MG F+ +FS LF +EMRIL++GLD GKTTILY+L++GE+V Sbjct: 1 MGGFFSSIFSSLFGTREMRILILGLDGAGKTTILYRLQVGEVV 43
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARF3_YEAST (ADP-ribosylation factor 3 OS=Saccharomyces cerevisiae GN=ARF3 PE=1 SV=2) HSP 1 Score: 152.14 bits (383), Expect = 7.035e-47 Identity = 70/131 (53.44%), Postives = 97/131 (74.05%), Query Frame = 2 Query: 143 PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLH-SLRQRHWYIQSTCATSGEGLYEGLDWLSNN 532 PT+GFNVETV YKN+ F +WDVGGQ ++RPLWRHYF LIFV+DS+ R+R+ EA++EL+ ++ E E+ + VLLV+ANK DL +AM E++D L L +L+ + W + + A SG+GL EGL W+SNN Sbjct: 47 PTVGFNVETVTYKNVKFNMWDVGGQQRLRPLWRHYFPATTALIFVIDSSARNRMEEAKEELYSIIGEKEMENVVLLVWANKQDLKDAMKPQEVSDFLELEKNLKNQPWCVIGSNALSGQGLVEGLSWISNN 177 HSP 2 Score: 56.6102 bits (135), Expect = 7.035e-47 Identity = 27/42 (64.29%), Postives = 33/42 (78.57%), Query Frame = 1 Query: 4 MGLSFTKLFSRLFAKKEMRILMVGLDAPGKTTILYKLKLGEI 129 MG S +K+ +LF KEM+ILM+GLD GKTTILYKLKL +I Sbjct: 1 MGNSISKVLGKLFGSKEMKILMLGLDKAGKTTILYKLKLNKI 42
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARL1_YEAST (ADP-ribosylation factor-like protein 1 OS=Saccharomyces cerevisiae GN=ARL1 PE=1 SV=4) HSP 1 Score: 155.221 bits (391), Expect = 2.646e-46 Identity = 72/127 (56.69%), Postives = 92/127 (72.44%), Query Frame = 2 Query: 143 PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWL 523 PTIGFNVET+ YKN+ VWD+GGQ IRP WR Y+ + +IFVVDS D+DR+ A ELH ML E+EL+DA LLVFANK D P A++A+E++ +L L L+ R W I ++ A GEG+ EGLDWL Sbjct: 48 PTIGFNVETLSYKNLKLNVWDLGGQTSIRPYWRCYYADTAAVIFVVDSTDKDRMSTASKELHLMLQEEELQDAALLVFANKQDQPGALSASEVSKELNLVELKDRSWSIVASSAIKGEGITEGLDWL 174 HSP 2 Score: 51.6026 bits (122), Expect = 2.646e-46 Identity = 24/44 (54.55%), Postives = 36/44 (81.82%), Query Frame = 1 Query: 4 MGLSFTKLFSRLF-AKKEMRILMVGLDAPGKTTILYKLKLGEIV 132 MG F+ +F +L+ + KE+RIL++GLD GKTTILY+L++GE+V Sbjct: 1 MGNIFSSMFDKLWGSNKELRILILGLDGAGKTTILYRLQIGEVV 44
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARL1_DROME (ADP-ribosylation factor-like protein 1 OS=Drosophila melanogaster GN=Arf72A PE=1 SV=5) HSP 1 Score: 151.754 bits (382), Expect = 5.286e-44 Identity = 72/135 (53.33%), Postives = 93/135 (68.89%), Query Frame = 2 Query: 140 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 544 IPTIGFNVE V YKN+ F VWD+GGQ IRP WR Y+ N +I+VVDS DRDR+ ++DEL ML E+EL A+L+V ANK D+ M AE+ LGL +L+ R + I T AT GEGL + +DWLSN + ++ Sbjct: 45 IPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAIIYVVDSADRDRIGISKDELLYMLREEELAGAILVVLANKQDMDGCMTVAEVHHALGLENLKNRTFQIFKTSATKGEGLDQAMDWLSNTLQSR 179 HSP 2 Score: 47.3654 bits (111), Expect = 5.286e-44 Identity = 21/35 (60.00%), Postives = 28/35 (80.00%), Query Frame = 1 Query: 28 FSRLFAKKEMRILMVGLDAPGKTTILYKLKLGEIV 132 F L +EMRIL++GLD GKTTILY+L++GE+V Sbjct: 8 FRGLLGSREMRILILGLDGAGKTTILYRLQVGEVV 42
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARFD_DICDI (ADP-ribosylation factor D OS=Dictyostelium discoideum GN=arrD PE=3 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 1.166e-43 Identity = 62/132 (46.97%), Postives = 94/132 (71.21%), Query Frame = 2 Query: 140 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 535 I T+G+NVET+++K+++ T+WD+ G+++IR LW+ ++ +IFVVDS+DR R+ EA EL +++ E+EL+ LL+FA K D + M E+TD+LGLH ++ R WY+Q T G G+YEGLDWLS I Sbjct: 46 ISTLGYNVETIQHKHLNLTLWDLAGEERIRTLWKPFYNKCTAIIFVVDSSDRLRIDEAASELAKLMKEEELKGCSLLIFATKQDCISPMEIPELTDQLGLHDIKDRRWYVQPTRTLEGIGIYEGLDWLSTKI 177 HSP 2 Score: 51.9878 bits (123), Expect = 1.166e-43 Identity = 24/43 (55.81%), Postives = 32/43 (74.42%), Query Frame = 1 Query: 4 MGLSFTKLFSRLFAKKEMRILMVGLDAPGKTTILYKLKLGEIV 132 MG+S + FS +F K +++LM+GLD GKTTILYKL L E+V Sbjct: 1 MGISSSNPFSSIFKSKAIKLLMLGLDGSGKTTILYKLMLNEVV 43 The following BLAST results are available for this feature:
BLAST of CK936034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 215
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Sequences
The
following sequences are available for this feature:
EST sequence >CK936034 ID=CK936034; Name=CK936034; organism=Citrus sinensis; type=EST; length=672bpback to top |