CK936034

Overview
NameCK936034
Unique NameCK936034
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length672
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARL1_CAEEL (ADP-ribosylation factor-like protein 1 OS=Caenorhabditis elegans GN=arl-1 PE=2 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 1.170e-43
Identity = 74/135 (54.81%), Postives = 89/135 (65.93%), Query Frame = 2
Query:  140 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 544
            IPTIGFNVE VEYKN+ F VWD+GGQ  IRP WR Y+ N   +I+VVDS DRDRV  +R EL  ML EDEL+ AVL V ANK D+   +   E+   LGL +LR R   I  T A+ GEGL   +DWL+N +  K
Sbjct:   45 IPTIGFNVEQVEYKNLKFQVWDLGGQTSIRPYWRCYYANTDAIIYVVDSADRDRVGISRQELATMLQEDELQGAVLAVLANKQDIAGCLTETEVYKALGLDALRNRTIQIFKTSASKGEGLDPAMDWLANQLQQK 179          

HSP 2 Score: 49.2914 bits (116), Expect = 1.170e-43
Identity = 22/35 (62.86%), Postives = 29/35 (82.86%), Query Frame = 1
Query:   28 FSRLFAKKEMRILMVGLDAPGKTTILYKLKLGEIV 132
            F  LF  +EMRIL++GLD  GKTTILY+L++GE+V
Sbjct:    8 FRGLFGAREMRILILGLDGAGKTTILYRLQVGEVV 42          
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARFF_DICDI (ADP-ribosylation factor F OS=Dictyostelium discoideum GN=arrF PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 1.650e-42
Identity = 67/137 (48.91%), Postives = 93/137 (67.88%), Query Frame = 2
Query:  140 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRML--NEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 544
            IPTIGFNVE +EYKN+S  VWD+GGQ+ IR LWR Y Q     IFVVDS DR+R  E + E+  ++  N++E  +A LL+FANK D+ N +  AE+ + L L+SL  + W++Q   A  G+G+YEG DW+ +N + K
Sbjct:   54 IPTIGFNVEIIEYKNLSMNVWDIGGQNNIRALWRQYDQRTDVFIFVVDSTDRERFDEVKQEIKNIIEQNKNESSNASLLIFANKQDMLNPITPAELVNSLDLNSLTNKKWHVQPCSAVRGDGIYEGFDWIVSNSSGK 190          

HSP 2 Score: 48.9062 bits (115), Expect = 1.650e-42
Identity = 20/39 (51.28%), Postives = 29/39 (74.36%), Query Frame = 1
Query:   16 FTKLFSRLFAKKEMRILMVGLDAPGKTTILYKLKLGEIV 132
            F  +FS    K+ +RILM+GLD  GK+T+LYKLK G+++
Sbjct:   13 FVNIFSLFEGKRNIRILMIGLDGAGKSTLLYKLKFGDVI 51          
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARL5B_MOUSE (ADP-ribosylation factor-like protein 5B OS=Mus musculus GN=Arl5b PE=2 SV=3)

HSP 1 Score: 140.584 bits (353), Expect = 1.937e-40
Identity = 63/131 (48.09%), Postives = 91/131 (69.47%), Query Frame = 2
Query:  143 PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 535
            PTIG NVE +  KN  F +WD+GGQ+ +R  W  Y+ N + +I VVDS DR+R+   ++EL+RML  ++LR A +L+FANK D+   M AAEI+  L L S++   W+IQS CA +GEGL +GL+W+++ I
Sbjct:   46 PTIGSNVEEIVVKNTHFLMWDIGGQESLRSSWNTYYSNTEFIILVVDSIDRERLAITKEELYRMLAHEDLRKAAVLIFANKQDMKGCMTAAEISKYLTLSSIKDHPWHIQSCCALTGEGLCQGLEWMTSRI 176          

HSP 2 Score: 46.595 bits (109), Expect = 1.937e-40
Identity = 23/43 (53.49%), Postives = 32/43 (74.42%), Query Frame = 1
Query:    4 MGLSFTKLFSRLFAKKEMRILMVGLDAPGKTTILYKLKLGEIV 132
            MGL F KL+S LF  +E ++++VGLD  GKTTILY+  + E+V
Sbjct:    1 MGLIFAKLWS-LFCNQEHKVIIVGLDNAGKTTILYQFLMNEVV 42          
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARL5B_HUMAN (ADP-ribosylation factor-like protein 5B OS=Homo sapiens GN=ARL5B PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.937e-40
Identity = 63/131 (48.09%), Postives = 91/131 (69.47%), Query Frame = 2
Query:  143 PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 535
            PTIG NVE +  KN  F +WD+GGQ+ +R  W  Y+ N + +I VVDS DR+R+   ++EL+RML  ++LR A +L+FANK D+   M AAEI+  L L S++   W+IQS CA +GEGL +GL+W+++ I
Sbjct:   46 PTIGSNVEEIVVKNTHFLMWDIGGQESLRSSWNTYYSNTEFIILVVDSIDRERLAITKEELYRMLAHEDLRKAAVLIFANKQDMKGCMTAAEISKYLTLSSIKDHPWHIQSCCALTGEGLCQGLEWMTSRI 176          

HSP 2 Score: 46.595 bits (109), Expect = 1.937e-40
Identity = 23/43 (53.49%), Postives = 32/43 (74.42%), Query Frame = 1
Query:    4 MGLSFTKLFSRLFAKKEMRILMVGLDAPGKTTILYKLKLGEIV 132
            MGL F KL+S LF  +E ++++VGLD  GKTTILY+  + E+V
Sbjct:    1 MGLIFAKLWS-LFCNQEHKVIIVGLDNAGKTTILYQFLMNEVV 42          
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARL5A_MOUSE (ADP-ribosylation factor-like protein 5A OS=Mus musculus GN=Arl5a PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 2.097e-39
Identity = 61/131 (46.56%), Postives = 89/131 (67.94%), Query Frame = 2
Query:  143 PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 535
            PTIG NVE +   N  F +WD+GGQ+ +RP W  Y+ N + +I VVDS DR+R+   R+EL++ML  ++LR A LL+FANK D+   M  AEI+  L L S++   W+IQ+ CA +GEGL +GL+W+ + +
Sbjct:   46 PTIGSNVEEIVVNNTRFLMWDIGGQESLRPSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVKECMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWMMSRL 176          

HSP 2 Score: 45.8246 bits (107), Expect = 2.097e-39
Identity = 21/43 (48.84%), Postives = 33/43 (76.74%), Query Frame = 1
Query:    4 MGLSFTKLFSRLFAKKEMRILMVGLDAPGKTTILYKLKLGEIV 132
            MG+ FT+++ RLF  +E ++++VGLD  GKTTILY+  + E+V
Sbjct:    1 MGILFTRIW-RLFNHQEHKVIIVGLDNAGKTTILYQFSMNEVV 42          
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARL5A_RAT (ADP-ribosylation factor-like protein 5A OS=Rattus norvegicus GN=Arl5a PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.741e-38
Identity = 60/131 (45.80%), Postives = 88/131 (67.18%), Query Frame = 2
Query:  143 PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 535
            PTIG NVE +   N  F +WD+GGQ+ +R  W  Y+ N + +I VVDS DR+R+   R+EL++ML  ++LR A LL+FANK D+   M  AEI+  L L S++   W+IQ+ CA +GEGL +GL+W+ + +
Sbjct:   46 PTIGSNVEEIVVNNTRFLMWDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVKECMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWMMSRL 176          

HSP 2 Score: 45.8246 bits (107), Expect = 1.741e-38
Identity = 21/43 (48.84%), Postives = 33/43 (76.74%), Query Frame = 1
Query:    4 MGLSFTKLFSRLFAKKEMRILMVGLDAPGKTTILYKLKLGEIV 132
            MG+ FT+++ RLF  +E ++++VGLD  GKTTILY+  + E+V
Sbjct:    1 MGILFTRIW-RLFNHQEHKVIIVGLDNAGKTTILYQFSMNEVV 42          
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARL5A_HUMAN (ADP-ribosylation factor-like protein 5A OS=Homo sapiens GN=ARL5A PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.741e-38
Identity = 60/131 (45.80%), Postives = 88/131 (67.18%), Query Frame = 2
Query:  143 PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 535
            PTIG NVE +   N  F +WD+GGQ+ +R  W  Y+ N + +I VVDS DR+R+   R+EL++ML  ++LR A LL+FANK D+   M  AEI+  L L S++   W+IQ+ CA +GEGL +GL+W+ + +
Sbjct:   46 PTIGSNVEEIVINNTRFLMWDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVKECMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWMMSRL 176          

HSP 2 Score: 45.8246 bits (107), Expect = 1.741e-38
Identity = 21/43 (48.84%), Postives = 33/43 (76.74%), Query Frame = 1
Query:    4 MGLSFTKLFSRLFAKKEMRILMVGLDAPGKTTILYKLKLGEIV 132
            MG+ FT+++ RLF  +E ++++VGLD  GKTTILY+  + E+V
Sbjct:    1 MGILFTRIW-RLFNHQEHKVIIVGLDNAGKTTILYQFSMNEVV 42          
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARL5A_BOVIN (ADP-ribosylation factor-like protein 5A OS=Bos taurus GN=ARL5A PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.741e-38
Identity = 60/131 (45.80%), Postives = 88/131 (67.18%), Query Frame = 2
Query:  143 PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 535
            PTIG NVE +   N  F +WD+GGQ+ +R  W  Y+ N + +I VVDS DR+R+   R+EL++ML  ++LR A LL+FANK D+   M  AEI+  L L S++   W+IQ+ CA +GEGL +GL+W+ + +
Sbjct:   46 PTIGSNVEEIVINNTRFLMWDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVKGCMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWMMSRL 176          

HSP 2 Score: 45.8246 bits (107), Expect = 1.741e-38
Identity = 21/43 (48.84%), Postives = 33/43 (76.74%), Query Frame = 1
Query:    4 MGLSFTKLFSRLFAKKEMRILMVGLDAPGKTTILYKLKLGEIV 132
            MG+ FT+++ RLF  +E ++++VGLD  GKTTILY+  + E+V
Sbjct:    1 MGILFTRIW-RLFNHQEHKVIIVGLDNAGKTTILYQFSMNEVV 42          
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARL5_CAEEL (ADP-ribosylation factor-like protein 5 OS=Caenorhabditis elegans GN=arl-5 PE=2 SV=3)

HSP 1 Score: 138.658 bits (348), Expect = 1.109e-37
Identity = 63/132 (47.73%), Postives = 88/132 (66.67%), Query Frame = 2
Query:  143 PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLR-QRHWYIQSTCATSGEGLYEGLDWLSNNI 535
            PTIG NVE V Y+N+ F +WD+GGQ+ +R  W  Y+     +I V+DS+D  R+   +++LH ML  ++L  A +LV ANK DLP AMN AE++ +LGL +LR  R W I   CA  GEGL E L+W++NN+
Sbjct:   47 PTIGSNVEEVSYRNLDFVIWDIGGQESLRKSWSTYYVQTDVVIVVIDSSDTTRIPIMKEQLHNMLQHEDLARAHILVLANKQDLPGAMNPAEVSTQLGLQTLRGARKWQINGCCAVKGEGLPEALEWIANNL 178          

HSP 2 Score: 39.2762 bits (90), Expect = 1.109e-37
Identity = 19/35 (54.29%), Postives = 24/35 (68.57%), Query Frame = 1
Query:    4 MGLSFTKLFSRLFAKKEMRILMVGLDAPGKTTILY 108
            MGL   KLF   +  K+ +I++VGLD  GKTTILY
Sbjct:    1 MGLIMAKLFQSWWIGKKYKIIVVGLDNAGKTTILY 35          
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARL5_DICDI (ADP-ribosylation factor-like protein 5 OS=Dictyostelium discoideum GN=arl5 PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 2.451e-37
Identity = 58/131 (44.27%), Postives = 90/131 (68.70%), Query Frame = 2
Query:  143 PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 535
            PT+G N+E   Y+NI   +WD+GGQD +R  W  Y+ N Q +I V+DS DR RV   ++EL +ML  + L+ +++L++ANK DL +AM+  E++  L LHS++   ++IQ+ CA +G+GL  GLDWL ++I
Sbjct:   50 PTVGSNLEEFVYRNIRLLMWDLGGQDLLRSTWNQYYINTQAVILVIDSTDRARVNLIKEELFKMLAHENLKKSIILIYANKQDLKDAMSPTELSTLLSLHSIKDHDYHIQACCALTGQGLESGLDWLVSHI 180          

HSP 2 Score: 43.5134 bits (101), Expect = 2.451e-37
Identity = 19/39 (48.72%), Postives = 28/39 (71.79%), Query Frame = 1
Query:   16 FTKLFSRLFAKKEMRILMVGLDAPGKTTILYKLKLGEIV 132
            F  +++R F   E ++++VGL+A GKTT LYKL L E+V
Sbjct:    8 FASIWNRFFNNAEYKVIIVGLNAAGKTTTLYKLLLDEVV 46          
The following BLAST results are available for this feature:
BLAST of CK936034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 215
Match NameE-valueIdentityDescription
ARL1_CAEEL1.170e-4354.81ADP-ribosylation factor-like protein 1 OS=Caenorha... [more]
ARFF_DICDI1.650e-4248.91ADP-ribosylation factor F OS=Dictyostelium discoid... [more]
ARL5B_MOUSE1.937e-4048.09ADP-ribosylation factor-like protein 5B OS=Mus mus... [more]
ARL5B_HUMAN1.937e-4048.09ADP-ribosylation factor-like protein 5B OS=Homo sa... [more]
ARL5A_MOUSE2.097e-3946.56ADP-ribosylation factor-like protein 5A OS=Mus mus... [more]
ARL5A_RAT1.741e-3845.80ADP-ribosylation factor-like protein 5A OS=Rattus ... [more]
ARL5A_HUMAN1.741e-3845.80ADP-ribosylation factor-like protein 5A OS=Homo sa... [more]
ARL5A_BOVIN1.741e-3845.80ADP-ribosylation factor-like protein 5A OS=Bos tau... [more]
ARL5_CAEEL1.109e-3747.73ADP-ribosylation factor-like protein 5 OS=Caenorha... [more]
ARL5_DICDI2.451e-3744.27ADP-ribosylation factor-like protein 5 OS=Dictyost... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004387_G04 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0002_IF_G04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936034 ID=CK936034; Name=CK936034; organism=Citrus sinensis; type=EST; length=672bp
AAAATGGGGCTGTCTTTCACCAAGCTTTTCAGCAGGCTTTTTGCTAAGAA
AGAGATGAGAATTCTCATGGTAGGTCTCGATGCACCTGGTAAGACTACTA
TCCTGTACAAGCTTAAGCTCGGAGAGATCGTCNNACACCATTCCTACCAT
TGGATTTAATGTAGAGACCGTTGAGTATAAGAACATCAGCTTTACTGTCT
GGGATGTTGGGGGTCAAGACAAGATCCGACCTTTGTGGAGACATTATTTC
CAAAACGCCCAAGGACTCATCTTTGTGGTTGACAGTAATGATCGCGACCG
TGTGGTAGAAGCTAGGGATGAGTTGCACAGAATGTTGAATGAGGATGAAT
TGAGAGATGCTGTGCTGCTTGTATTTGCTAACAAGCACGATCTTCCAAAT
GCAATGAATGCTGCTGAGATAACTGACAAGCTTGGCCTTCACTCTCTTCG
CCAGCGCCACTGGTATATCCAGAGCACATGTGCCACTTCTGGTGAAGGGC
TGTATGAGGGACTTGACTGGCTCTCAAACAACATTGCAAACAAGGCATAG
ACAACTAAATTTTGAGTTTTGGGTTGCCGCAACTGCTGAAATACAGAGTT
AACAACACATCTCAAGTGTTCTTGCTTTCCTTCCTGTAATAGCTTCGTTG
CCCGTTTTACTGTGTTTGTTGT
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