CK936034

Overview
NameCK936034
Unique NameCK936034
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length672
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARL2_BOVIN (ADP-ribosylation factor-like protein 2 OS=Bos taurus GN=ARL2 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 2.649e-36
Identity = 62/134 (46.27%), Postives = 92/134 (68.66%), Query Frame = 2
Query:  143 PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 544
            PT+GFN++T+E++     +WDVGGQ  +R  WR+YF++  GLI+VVDS DR R+ + + EL  +L E+ L  A LL+FANK DLP A+++  I + L L S+R  HW IQ   A +GE L  G+DWL ++I+++
Sbjct:   46 PTLGFNIKTLEHRGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQNLLVEERLAGATLLIFANKQDLPGALSSNAIREALELDSIRSHHWCIQGCSAVTGENLLPGIDWLLDDISSR 179          

HSP 2 Score: 32.3426 bits (72), Expect = 2.649e-36
Identity = 14/22 (63.64%), Postives = 19/22 (86.36%), Query Frame = 1
Query:   46 KKEMRILMVGLDAPGKTTILYK 111
            ++E+R+LM+GLD  GKTTIL K
Sbjct:   14 ERELRLLMLGLDNAGKTTILKK 35          
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARL2_MOUSE (ADP-ribosylation factor-like protein 2 OS=Mus musculus GN=Arl2 PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 4.494e-36
Identity = 63/137 (45.99%), Postives = 92/137 (67.15%), Query Frame = 2
Query:  143 PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA*T 553
            PT+GFN++T+E++     +WDVGGQ  +R  WR+YF++  GLI+VVDS DR R+ + + EL  +L E+ L  A LL+FANK DLP A++   I + L L S+R  HW IQ   A +GE L  G+DWL ++I+++  T
Sbjct:   46 PTLGFNIKTLEHRGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDLPGALSCNAIQEALELDSIRSHHWRIQGCSAVTGEDLLPGIDWLLDDISSRVFT 182          

HSP 2 Score: 32.3426 bits (72), Expect = 4.494e-36
Identity = 14/22 (63.64%), Postives = 19/22 (86.36%), Query Frame = 1
Query:   46 KKEMRILMVGLDAPGKTTILYK 111
            ++E+R+LM+GLD  GKTTIL K
Sbjct:   14 ERELRLLMLGLDNAGKTTILKK 35          
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARL2_HUMAN (ADP-ribosylation factor-like protein 2 OS=Homo sapiens GN=ARL2 PE=1 SV=4)

HSP 1 Score: 140.198 bits (352), Expect = 4.494e-36
Identity = 62/134 (46.27%), Postives = 92/134 (68.66%), Query Frame = 2
Query:  143 PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 544
            PT+GFN++T+E++     +WDVGGQ  +R  WR+YF++  GLI+VVDS DR R+ + + EL  +L E+ L  A LL+FANK DLP A+++  I + L L S+R  HW IQ   A +GE L  G+DWL ++I+++
Sbjct:   46 PTLGFNIKTLEHRGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDLPGALSSNAIREVLELDSIRSHHWCIQGCSAVTGENLLPGIDWLLDDISSR 179          

HSP 2 Score: 32.3426 bits (72), Expect = 4.494e-36
Identity = 14/22 (63.64%), Postives = 19/22 (86.36%), Query Frame = 1
Query:   46 KKEMRILMVGLDAPGKTTILYK 111
            ++E+R+LM+GLD  GKTTIL K
Sbjct:   14 ERELRLLMLGLDNAGKTTILKK 35          
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARL2_RAT (ADP-ribosylation factor-like protein 2 OS=Rattus norvegicus GN=Arl2 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.294e-35
Identity = 63/137 (45.99%), Postives = 92/137 (67.15%), Query Frame = 2
Query:  143 PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA*T 553
            PT+GFN++T+E++     +WDVGGQ  +R  WR+YF++  GLI+VVDS DR R+ + + EL  +L E+ L  A LL+FANK DLP A++   I + L L S+R  HW IQ   A +GE L  G+DWL ++I+++  T
Sbjct:   46 PTLGFNIKTLEHRGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDLPGALSCNAIQEALELDSIRSHHWRIQGCSAVTGEDLLPGIDWLLDDISSRVFT 182          

HSP 2 Score: 30.8018 bits (68), Expect = 1.294e-35
Identity = 13/22 (59.09%), Postives = 19/22 (86.36%), Query Frame = 1
Query:   46 KKEMRILMVGLDAPGKTTILYK 111
            ++++R+LM+GLD  GKTTIL K
Sbjct:   14 ERDVRLLMLGLDNAGKTTILKK 35          
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARL3_TAEGU (ADP-ribosylation factor-like protein 3 OS=Taeniopygia guttata GN=ARL3 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.686e-35
Identity = 64/134 (47.76%), Postives = 91/134 (67.91%), Query Frame = 2
Query:  143 PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 544
            PT GFN+++V+ +     VWD+GGQ KIRP WR+YF+N   LI+V+DS DR R  E   EL  +L+E++L    +L+FANK DL  A  A+EI + L LH++R R W IQS  A SGEG+ +G++W+  N++ K
Sbjct:   47 PTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRNYFENTDILIYVIDSADRKRFEETGQELAELLDEEKLSGVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALSGEGVQDGMNWVCKNVSTK 180          

HSP 2 Score: 30.4166 bits (67), Expect = 1.686e-35
Identity = 14/27 (51.85%), Postives = 21/27 (77.78%), Query Frame = 1
Query:   49 KEMRILMVGLDAPGKTTILYKLKLGEI 129
            +E+RIL++GLD  GKTT+L +L   +I
Sbjct:   16 QEVRILLLGLDNAGKTTLLKQLASEDI 42          
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARL2_CAEEL (ADP-ribosylation factor-like protein 2 OS=Caenorhabditis elegans GN=evl-20 PE=2 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 4.854e-35
Identity = 58/134 (43.28%), Postives = 92/134 (68.66%), Query Frame = 2
Query:  143 PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 544
            PT+GF+++TV +K+    +WDVGGQ  +R  W++YF++   LI+VVDS+DR+R+++  +EL ++L E+ L  A LLV ANK DLP A++   I   L LHS++  HW I S CA SG+ L + + WL +++ ++
Sbjct:   46 PTLGFDIKTVHFKDFQLNLWDVGGQKSLRSYWKNYFESTDALIWVVDSSDRERLLQCSEELKKLLGEERLAGASLLVLANKSDLPGAIDVNSIAQVLDLHSIKSHHWKIFSCCALSGDRLVQAMTWLCDDVGSR 179          

HSP 2 Score: 32.3426 bits (72), Expect = 4.854e-35
Identity = 16/35 (45.71%), Postives = 25/35 (71.43%), Query Frame = 1
Query:   10 LSFTKLFSRLFAK-KEMRILMVGLDAPGKTTILYK 111
            + F K+  +  A+ +EMRIL++GLD  GKTT++ K
Sbjct:    1 MGFLKILRKQRAREREMRILILGLDNAGKTTLMKK 35          
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARL3_BOVIN (ADP-ribosylation factor-like protein 3 OS=Bos taurus GN=ARL3 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 8.235e-35
Identity = 63/134 (47.01%), Postives = 90/134 (67.16%), Query Frame = 2
Query:  143 PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 544
            PT GFN+++V+ +     VWD+GGQ KIRP WR+YF+N   LI+V+DS DR R  E   EL  +L E++L    +L+FANK DL  A  A+EI + L LH++R R W IQS  A +GEG+ +G++W+  N++ K
Sbjct:   47 PTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRNYFENTDILIYVIDSADRKRFEETGQELAELLEEEKLSCVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDRFWQIQSCSALTGEGVQDGMNWVCKNVSAK 180          

HSP 2 Score: 30.4166 bits (67), Expect = 8.235e-35
Identity = 14/27 (51.85%), Postives = 21/27 (77.78%), Query Frame = 1
Query:   49 KEMRILMVGLDAPGKTTILYKLKLGEI 129
            +E+RIL++GLD  GKTT+L +L   +I
Sbjct:   16 QEVRILLLGLDNAGKTTLLKQLASEDI 42          
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARL3_RAT (ADP-ribosylation factor-like protein 3 OS=Rattus norvegicus GN=Arl3 PE=1 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 1.820e-34
Identity = 65/134 (48.51%), Postives = 88/134 (65.67%), Query Frame = 2
Query:  143 PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 544
            PT GFN+++V+ +     VWD+GGQ KIRP WR YF+N   LI+V+DS DR R  E   EL  +L E++L    +LVFANK DL  A  AAEI + L LH++R R W IQS  A +GEG+ +G++W+  N+  K
Sbjct:   47 PTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLVFANKQDLLTAAPAAEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKNVNAK 180          

HSP 2 Score: 30.4166 bits (67), Expect = 1.820e-34
Identity = 14/27 (51.85%), Postives = 21/27 (77.78%), Query Frame = 1
Query:   49 KEMRILMVGLDAPGKTTILYKLKLGEI 129
            +E+RIL++GLD  GKTT+L +L   +I
Sbjct:   16 QEVRILLLGLDNAGKTTLLKQLASEDI 42          
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARL3_XENLA (ADP-ribosylation factor-like protein 3 OS=Xenopus laevis GN=arl3 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.371e-34
Identity = 62/134 (46.27%), Postives = 90/134 (67.16%), Query Frame = 2
Query:  143 PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 544
            PT GFN+++V+ +     VWD+GGQ KIRP WR+YF+N   LI+V+DS DR R  E   EL  +L+E++L    +L+FANK DL  A  A+EI + L LH++R R W IQS  A +G+G+ +G++W+  N+  K
Sbjct:   47 PTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRNYFENTDVLIYVIDSADRKRFEETGQELAELLDEEKLSGVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGQGVQDGMNWVCKNVNAK 180          

HSP 2 Score: 30.4166 bits (67), Expect = 2.371e-34
Identity = 14/27 (51.85%), Postives = 21/27 (77.78%), Query Frame = 1
Query:   49 KEMRILMVGLDAPGKTTILYKLKLGEI 129
            +E+RIL++GLD  GKTT+L +L   +I
Sbjct:   16 QEVRILLLGLDNAGKTTLLKQLASEDI 42          
BLAST of CK936034 vs. ExPASy Swiss-Prot
Match: ARL3_PIG (ADP-ribosylation factor-like protein 3 OS=Sus scrofa GN=ARL3 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 3.088e-34
Identity = 63/134 (47.01%), Postives = 89/134 (66.42%), Query Frame = 2
Query:  143 PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNAQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKHDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 544
            PT GFN+++V+ +     VWD+GGQ KIRP WR+YF+N   LI+V+DS DR R  E   EL  +L E++L    +L+FANK DL  A  A+EI + L LH++R R W IQS  A +GEG+ +G++W+  N+  K
Sbjct:   47 PTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRNYFENTDILIYVIDSADRKRFEETGQELAELLEEEKLSCVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKNVNAK 180          

HSP 2 Score: 30.4166 bits (67), Expect = 3.088e-34
Identity = 14/27 (51.85%), Postives = 21/27 (77.78%), Query Frame = 1
Query:   49 KEMRILMVGLDAPGKTTILYKLKLGEI 129
            +E+RIL++GLD  GKTT+L +L   +I
Sbjct:   16 QEVRILLLGLDNAGKTTLLKQLASEDI 42          
The following BLAST results are available for this feature:
BLAST of CK936034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 215
Match NameE-valueIdentityDescription
ARL2_BOVIN2.649e-3646.27ADP-ribosylation factor-like protein 2 OS=Bos taur... [more]
ARL2_MOUSE4.494e-3645.99ADP-ribosylation factor-like protein 2 OS=Mus musc... [more]
ARL2_HUMAN4.494e-3646.27ADP-ribosylation factor-like protein 2 OS=Homo sap... [more]
ARL2_RAT1.294e-3545.99ADP-ribosylation factor-like protein 2 OS=Rattus n... [more]
ARL3_TAEGU1.686e-3547.76ADP-ribosylation factor-like protein 3 OS=Taeniopy... [more]
ARL2_CAEEL4.854e-3543.28ADP-ribosylation factor-like protein 2 OS=Caenorha... [more]
ARL3_BOVIN8.235e-3547.01ADP-ribosylation factor-like protein 3 OS=Bos taur... [more]
ARL3_RAT1.820e-3448.51ADP-ribosylation factor-like protein 3 OS=Rattus n... [more]
ARL3_XENLA2.371e-3446.27ADP-ribosylation factor-like protein 3 OS=Xenopus ... [more]
ARL3_PIG3.088e-3447.01ADP-ribosylation factor-like protein 3 OS=Sus scro... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004387_G04 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0002_IF_G04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936034 ID=CK936034; Name=CK936034; organism=Citrus sinensis; type=EST; length=672bp
AAAATGGGGCTGTCTTTCACCAAGCTTTTCAGCAGGCTTTTTGCTAAGAA
AGAGATGAGAATTCTCATGGTAGGTCTCGATGCACCTGGTAAGACTACTA
TCCTGTACAAGCTTAAGCTCGGAGAGATCGTCNNACACCATTCCTACCAT
TGGATTTAATGTAGAGACCGTTGAGTATAAGAACATCAGCTTTACTGTCT
GGGATGTTGGGGGTCAAGACAAGATCCGACCTTTGTGGAGACATTATTTC
CAAAACGCCCAAGGACTCATCTTTGTGGTTGACAGTAATGATCGCGACCG
TGTGGTAGAAGCTAGGGATGAGTTGCACAGAATGTTGAATGAGGATGAAT
TGAGAGATGCTGTGCTGCTTGTATTTGCTAACAAGCACGATCTTCCAAAT
GCAATGAATGCTGCTGAGATAACTGACAAGCTTGGCCTTCACTCTCTTCG
CCAGCGCCACTGGTATATCCAGAGCACATGTGCCACTTCTGGTGAAGGGC
TGTATGAGGGACTTGACTGGCTCTCAAACAACATTGCAAACAAGGCATAG
ACAACTAAATTTTGAGTTTTGGGTTGCCGCAACTGCTGAAATACAGAGTT
AACAACACATCTCAAGTGTTCTTGCTTTCCTTCCTGTAATAGCTTCGTTG
CCCGTTTTACTGTGTTTGTTGT
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