CK936044
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK936044 vs. ExPASy Swiss-Prot
Match: FAD6C_BRANA (Omega-6 fatty acid desaturase, chloroplastic OS=Brassica napus PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.426e-14 Identity = 34/89 (38.20%), Postives = 47/89 (52.81%), Query Frame = 2 Query: 266 WFFWPLYWVAQGTMFWAIFVLGHDCGHGSFSESPLLNSFVGHILHSSILVPYNGWRISHRTHHQNHGNVEHDESWVPMPEKIYSKLDSS 532 W+ PL W GT FV+GHDC H SFS++ L+ VG + ++ PY WR H HH + HD +W P+P + + DSS Sbjct: 144 WYLLPLAWAWTGTAVTGFFVIGHDCAHKSFSKNKLVEDIVGTLAFLPLVYPYEPWRFKHDRHHAKTNMLVHDTAWQPVPPE---EFDSS 229
BLAST of CK936044 vs. ExPASy Swiss-Prot
Match: FAD6C_ARATH (Omega-6 fatty acid desaturase, chloroplastic OS=Arabidopsis thaliana GN=FAD6 PE=1 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 4.426e-14 Identity = 31/79 (39.24%), Postives = 42/79 (53.16%), Query Frame = 2 Query: 266 WFFWPLYWVAQGTMFWAIFVLGHDCGHGSFSESPLLNSFVGHILHSSILVPYNGWRISHRTHHQNHGNVEHDESWVPMP 502 W+ PL W GT FV+GHDC H SFS++ L+ VG + ++ PY WR H HH + HD +W P+P Sbjct: 149 WYLLPLAWAWTGTAITGFFVIGHDCAHKSFSKNKLVEDIVGTLAFLPLVYPYEPWRFKHDRHHAKTNMLVHDTAWQPVP 227
BLAST of CK936044 vs. ExPASy Swiss-Prot
Match: FAD6C_SPIOL (Omega-6 fatty acid desaturase, chloroplastic OS=Spinacia oleracea GN=FAD6 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.869e-13 Identity = 33/85 (38.82%), Postives = 44/85 (51.76%), Query Frame = 2 Query: 266 WFFWPLYWVAQGTMFWAIFVLGHDCGHGSFSESPLLNSFVGHILHSSILVPYNGWRISHRTHHQNHGNVEHDESWVP-MPEKIYS 517 W+ PL W GT FV+GHDC H SFS++ L+ VG + ++ PY WR H HH + D +W+P M E I S Sbjct: 149 WYLLPLAWAWTGTAITGFFVIGHDCAHKSFSKNKLVEDIVGTLAFMPLIYPYEPWRFKHDQHHTKTNMLREDTAWLPIMKEDIES 233
BLAST of CK936044 vs. ExPASy Swiss-Prot
Match: FAD6C_SOYBN (Omega-6 fatty acid desaturase, chloroplastic OS=Glycine max PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.894e-13 Identity = 30/78 (38.46%), Postives = 40/78 (51.28%), Query Frame = 2 Query: 266 WFFWPLYWVAQGTMFWAIFVLGHDCGHGSFSESPLLNSFVGHILHSSILVPYNGWRISHRTHHQNHGNVEHDESWVPM 499 W+ PL WV GT FV+GHDC H SFS + L+ VG + ++ PY WR H HH + D +W P+ Sbjct: 143 WYLLPLAWVWTGTAITGFFVIGHDCAHRSFSSNKLVEDIVGTLAFMPLIYPYEPWRFKHDRHHAKTNMLREDTAWHPV 220 The following BLAST results are available for this feature:
BLAST of CK936044 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK936044 ID=CK936044; Name=CK936044; organism=Citrus sinensis; type=EST; length=673bpback to top |