CK936053

Overview
NameCK936053
Unique NameCK936053
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length562
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936053 vs. ExPASy Swiss-Prot
Match: METK4_CAEEL (Probable S-adenosylmethionine synthetase 4 OS=Caenorhabditis elegans GN=sams-4 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 1.806e-46
Identity = 94/149 (63.09%), Postives = 113/149 (75.84%), Query Frame = 1
Query:  112 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARL 558
            FLFTSESV+EGHPDK+CDQISDAVLDA L QDP +KVACET TKT M+M+ GEIT+KA VDY+ +VR+  + IG+     G D   C VLV +EQQSP+IA GV  H  K  +D+GAGDQG MFGYATDET E MPL+ +L+ KL  +L
Sbjct:    6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGV--HVDKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKL 152          
BLAST of CK936053 vs. ExPASy Swiss-Prot
Match: METK3_CAEEL (Probable S-adenosylmethionine synthetase 3 OS=Caenorhabditis elegans GN=sams-3 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 1.806e-46
Identity = 94/149 (63.09%), Postives = 113/149 (75.84%), Query Frame = 1
Query:  112 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARL 558
            FLFTSESV+EGHPDK+CDQISDAVLDA L QDP +KVACET TKT M+M+ GEIT+KA VDY+ +VR+  + IG+     G D   C VLV +EQQSP+IA GV  H  K  +D+GAGDQG MFGYATDET E MPL+ +L+ KL  +L
Sbjct:    6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGV--HVDKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKL 152          
BLAST of CK936053 vs. ExPASy Swiss-Prot
Match: METK5_CAEEL (Probable S-adenosylmethionine synthetase 5 OS=Caenorhabditis elegans GN=sams-5 PE=2 SV=2)

HSP 1 Score: 182.956 bits (463), Expect = 8.962e-46
Identity = 94/149 (63.09%), Postives = 112/149 (75.17%), Query Frame = 1
Query:  112 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARL 558
            FLFTSESV+EGHPDK+CDQISDAVLDA L QDP +KVACET TKT M+M+ GEIT+KA VDY+ +VR+  + IG+     G D   C VLV +EQQSP+IA GV  H  K   D+GAGDQG MFGYATDET E MPL+ +L+ KL  +L
Sbjct:    6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGV--HVDKDIADVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNYKL 152          
BLAST of CK936053 vs. ExPASy Swiss-Prot
Match: METK_LACPL (S-adenosylmethionine synthetase OS=Lactobacillus plantarum GN=metK PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 7.587e-45
Identity = 93/159 (58.49%), Postives = 114/159 (71.70%), Query Frame = 1
Query:  106 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPED------IGAGDQGHMFGYATDETPEFMP----LSHVLATKLGA 552
            E  LFTSESV+EGHPDK+ DQISDA+LDA L QDP+++VA ET   T +V+VFGE++TKA VD +K+VRDT +SIG+V    G D D+C VLV++++QSPDIAQGV      R  D      IGAGDQG MFGYA +ETPE MP    LSH L  K+ A
Sbjct:    3 ERHLFTSESVSEGHPDKIADQISDAILDAMLAQDPQARVAVETSVTTGLVLVFGEVSTKAYVDIQKVVRDTIKSIGYVDGQYGFDGDNCAVLVSLDEQSPDIAQGVDDSLETRSGDADPLDQIGAGDQGMMFGYAINETPELMPLPIALSHRLMRKIAA 161          
BLAST of CK936053 vs. ExPASy Swiss-Prot
Match: METK_PROM1 (S-adenosylmethionine synthetase OS=Prochlorococcus marinus (strain NATL1A) GN=metK PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 1.690e-44
Identity = 90/156 (57.69%), Postives = 114/156 (73.08%), Query Frame = 1
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVS-DDVGLDADHCKVLVNIEQQSPDIAQGVH---GHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARL 558
            M  ++FTSESV EGHPDK+CDQ+SDAVLDACL +DP S+VACE    T + ++ GEIT+KA+VD+ K+VR+  +SIG+ S  D G DA+ C VLV ++QQS DIAQGV+    H T   + +GAGDQG MFG+A DETPE MPL   LA +L  RL
Sbjct:    1 MSRYVFTSESVTEGHPDKICDQVSDAVLDACLSEDPTSRVACEAVVNTGLCLITGEITSKAEVDFNKLVREVIKSIGYRSASDGGFDANSCAVLVALDQQSSDIAQGVNEAEDHSTDPLDQVGAGDQGIMFGFACDETPELMPLPISLAHRLARRL 156          
BLAST of CK936053 vs. ExPASy Swiss-Prot
Match: METK_LACRJ (S-adenosylmethionine synthetase OS=Lactobacillus reuteri (strain JCM 1112) GN=metK PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 2.207e-44
Identity = 90/153 (58.82%), Postives = 113/153 (73.86%), Query Frame = 1
Query:  106 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP------EDIGAGDQGHMFGYATDETPEFMPLSHVLATKL 546
            E  LFTSESV+EGHPDK+ DQISDA+LD  L++DP+S+VA ET   T +V+VFGE++TKA V+ ++IVRDT R IG+     G DAD+C V+  I++QSPDIAQGV      R       + IGAGDQG MFGYATDETPE+MPL+ VL+ KL
Sbjct:    3 ERHLFTSESVSEGHPDKIADQISDAILDELLKKDPDSRVAVETSVTTGLVLVFGEVSTKAYVNIQQIVRDTIRKIGYTDGKYGFDADNCAVITAIDEQSPDIAQGVDDSLETREGEADPLDKIGAGDQGLMFGYATDETPEYMPLTLVLSHKL 155          
BLAST of CK936053 vs. ExPASy Swiss-Prot
Match: METK_LACRD (S-adenosylmethionine synthetase OS=Lactobacillus reuteri (strain DSM 20016) GN=metK PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 2.207e-44
Identity = 90/153 (58.82%), Postives = 113/153 (73.86%), Query Frame = 1
Query:  106 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP------EDIGAGDQGHMFGYATDETPEFMPLSHVLATKL 546
            E  LFTSESV+EGHPDK+ DQISDA+LD  L++DP+S+VA ET   T +V+VFGE++TKA V+ ++IVRDT R IG+     G DAD+C V+  I++QSPDIAQGV      R       + IGAGDQG MFGYATDETPE+MPL+ VL+ KL
Sbjct:    3 ERHLFTSESVSEGHPDKIADQISDAILDELLKKDPDSRVAVETSVTTGLVLVFGEVSTKAYVNIQQIVRDTIRKIGYTDGKYGFDADNCAVITAIDEQSPDIAQGVDDSLETREGEADPLDKIGAGDQGLMFGYATDETPEYMPLTLVLSHKL 155          
BLAST of CK936053 vs. ExPASy Swiss-Prot
Match: METK_ANASK (S-adenosylmethionine synthetase OS=Anaeromyxobacter sp. (strain K) GN=metK PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 2.207e-44
Identity = 88/139 (63.31%), Postives = 104/139 (74.82%), Query Frame = 1
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMP 519
            ++ FLFTSESV EGHPDK+ DQISDAVLDA L QDP+ +VACET  KT  VM+ GEITTKA++DY K+ R+T R IG+ S D+G DA+ C VLV ++QQSPDI QGV        +  GAGDQG MFGYA DETPE MP
Sbjct:    3 LQDFLFTSESVTEGHPDKMADQISDAVLDAVLRQDPKGRVACETLLKTGYVMIAGEITTKARIDYPKLARETVRRIGYTSGDMGFDANTCAVLVAVDQQSPDIGQGV--------DTGGAGDQGMMFGYACDETPELMP 133          
BLAST of CK936053 vs. ExPASy Swiss-Prot
Match: METK_ANADE (S-adenosylmethionine synthetase OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=metK PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 2.207e-44
Identity = 88/139 (63.31%), Postives = 104/139 (74.82%), Query Frame = 1
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMP 519
            ++ FLFTSESV EGHPDK+ DQISDAVLDA L QDP+ +VACET  KT  VM+ GEITTKA++DY K+ R+T R IG+ S D+G DA+ C VLV ++QQSPDI QGV        +  GAGDQG MFGYA DETPE MP
Sbjct:    3 LQDFLFTSESVTEGHPDKMADQISDAVLDAVLRQDPKGRVACETLLKTGYVMIAGEITTKARIDYPKLARETVRRIGYTSGDMGFDANTCAVLVAVDQQSPDIGQGV--------DTGGAGDQGMMFGYACDETPELMP 133          
BLAST of CK936053 vs. ExPASy Swiss-Prot
Match: METK_ANAD2 (S-adenosylmethionine synthetase OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=metK PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 2.207e-44
Identity = 88/139 (63.31%), Postives = 104/139 (74.82%), Query Frame = 1
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMP 519
            ++ FLFTSESV EGHPDK+ DQISDAVLDA L QDP+ +VACET  KT  VM+ GEITTKA++DY K+ R+T R IG+ S D+G DA+ C VLV ++QQSPDI QGV        +  GAGDQG MFGYA DETPE MP
Sbjct:    3 LQDFLFTSESVTEGHPDKMADQISDAVLDAVLRQDPKGRVACETLLKTGYVMIAGEITTKARIDYPKLARETVRRIGYTSGDMGFDANTCAVLVAVDQQSPDIGQGV--------DTGGAGDQGMMFGYACDETPELMP 133          
The following BLAST results are available for this feature:
BLAST of CK936053 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK4_CAEEL1.806e-4663.09Probable S-adenosylmethionine synthetase 4 OS=Caen... [more]
METK3_CAEEL1.806e-4663.09Probable S-adenosylmethionine synthetase 3 OS=Caen... [more]
METK5_CAEEL8.962e-4663.09Probable S-adenosylmethionine synthetase 5 OS=Caen... [more]
METK_LACPL7.587e-4558.49S-adenosylmethionine synthetase OS=Lactobacillus p... [more]
METK_PROM11.690e-4457.69S-adenosylmethionine synthetase OS=Prochlorococcus... [more]
METK_LACRJ2.207e-4458.82S-adenosylmethionine synthetase OS=Lactobacillus r... [more]
METK_LACRD2.207e-4458.82S-adenosylmethionine synthetase OS=Lactobacillus r... [more]
METK_ANASK2.207e-4463.31S-adenosylmethionine synthetase OS=Anaeromyxobacte... [more]
METK_ANADE2.207e-4463.31S-adenosylmethionine synthetase OS=Anaeromyxobacte... [more]
METK_ANAD22.207e-4463.31S-adenosylmethionine synthetase OS=Anaeromyxobacte... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004387_E09 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0002_IF_E09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936053 ID=CK936053; Name=CK936053; organism=Citrus sinensis; type=EST; length=562bp
GGGGGCCCAAACTCAGTTGAGTTCCGCTTTGCTATTGAGGTCGGGTCTTA
AGTCTGAATCTTAGATCTGCGCCGAAACACTTGCCAGCCACAGCTTGATA
AGATGGAGACCTTTCTATTCACCTCTGAATCTGTGAACGAGGGTCACCCC
GACAAGTTGTGCGACCAGATCTCTGATGCGGTGCTTGATGCCTGCCTTGA
GCAGGATCCTGAGAGCAAGGTTGCCTGTGAGACATGCACCAAGACCAACA
TGGTCATGGTCTTTGGAGAGATTACCACCAAGGCCAAGGTAGACTATGAG
AAGATTGTTCGCGACACTTGCCGTTCCATTGGATTTGTTTCTGATGATGT
GGGTCTTGATGCCGATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAA
GCCCTGATATTGCCCAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAG
GACATTGGTGCTGGTGACCAGGGCCATATGTTTGGTTATGCTACTGATGA
GACCCCTGAATTTATGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTG
CTCGTCTCACGG
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