CK936053

Overview
NameCK936053
Unique NameCK936053
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length562
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936053 vs. ExPASy Swiss-Prot
Match: METK_DESVH (S-adenosylmethionine synthetase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=metK PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 5.823e-37
Identity = 81/150 (54.00%), Postives = 99/150 (66.00%), Query Frame = 1
Query:  112 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLT 561
            + FTSESV EGHPDK+ DQISDAVLD  L QDP S+VACET   T M ++ GEITT+   D   +VR+T R+IG+ S ++G D   C V+ +I++QS DIAQGV        ED GAGDQG MFG+A DET   MP     A +L  RLT
Sbjct:    8 YYFTSESVTEGHPDKVADQISDAVLDVLLAQDPNSRVACETLVTTGMAVIAGEITTRGYADLPHVVRETIRNIGYNSSEMGFDWQTCAVISSIDKQSADIAQGVD---RATNEDQGAGDQGMMFGFACDETATLMPAPIYWAHQLSQRLT 154          
BLAST of CK936053 vs. ExPASy Swiss-Prot
Match: METK_BIFA0 (S-adenosylmethionine synthetase OS=Bifidobacterium animalis subsp. lactis (strain AD011) GN=metK PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 5.823e-37
Identity = 84/160 (52.50%), Postives = 101/160 (63.12%), Query Frame = 1
Query:  106 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDI---------GAGDQGHMFGYATDETPEFMPLSHVLATKLGARL 558
            E  L ++ESV EGHPDK+CDQISDA+LD  L QDP S VA ET        VFGE+T+K   D + IVRDT R IG+ S  +GLDAD C VLV++ +QSP+I QGV    + R   +         GAGDQG MFGYA+DET   MPL   LA +L  RL
Sbjct:    3 EVKLISAESVTEGHPDKICDQISDAILDDMLRQDPHSHVAVETSATKGQFWVFGEVTSKGYSDIQSIVRDTVRRIGYTSSVIGLDADSCGVLVSLSEQSPEINQGVSRIDSDRENAVSREERYEAQGAGDQGVMFGYASDETDVLMPLPIHLAHRLAYRL 162          
BLAST of CK936053 vs. ExPASy Swiss-Prot
Match: METK_STRSY (S-adenosylmethionine synthetase OS=Streptococcus suis (strain 05ZYH33) GN=metK PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 7.605e-37
Identity = 84/158 (53.16%), Postives = 103/158 (65.19%), Query Frame = 1
Query:  106 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPED-------IGAGDQGHMFGYATDETPEFMPLSHVLATKLGARL 558
            E  LFTSESV+EGHPDK+ DQISDA+LDA L +DP++ VA ET   T  V VFGEI+T A VD  ++VRDT   IG+   + G  A+   V  ++ +QSPDIAQGV+     R +        IGAGDQG MFG+A DETPE MPL   L+ KL  RL
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAILAEDPDAHVAAETAVYTGSVHVFGEISTTAYVDINRVVRDTIAEIGYTKGEYGFSAESVGVHPSLVEQSPDIAQGVNEALETRQDASQDPLDLIGAGDQGLMFGFAVDETPELMPLPISLSHKLVRRL 160          
BLAST of CK936053 vs. ExPASy Swiss-Prot
Match: METK_STRS2 (S-adenosylmethionine synthetase OS=Streptococcus suis (strain 98HAH33) GN=metK PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 7.605e-37
Identity = 84/158 (53.16%), Postives = 103/158 (65.19%), Query Frame = 1
Query:  106 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPED-------IGAGDQGHMFGYATDETPEFMPLSHVLATKLGARL 558
            E  LFTSESV+EGHPDK+ DQISDA+LDA L +DP++ VA ET   T  V VFGEI+T A VD  ++VRDT   IG+   + G  A+   V  ++ +QSPDIAQGV+     R +        IGAGDQG MFG+A DETPE MPL   L+ KL  RL
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAILAEDPDAHVAAETAVYTGSVHVFGEISTTAYVDINRVVRDTIAEIGYTKGEYGFSAESVGVHPSLVEQSPDIAQGVNEALETRQDASQDPLDLIGAGDQGLMFGFAVDETPELMPLPISLSHKLVRRL 160          
BLAST of CK936053 vs. ExPASy Swiss-Prot
Match: METK_RALSO (S-adenosylmethionine synthetase OS=Ralstonia solanacearum GN=metK PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 7.605e-37
Identity = 83/151 (54.97%), Postives = 102/151 (67.55%), Query Frame = 1
Query:  112 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDI---GAGDQGHMFGYATDETPEFMPLSHVLATKLGAR 555
            FLFTSESV+EGHPDK+ DQISDA+LDA L QD  ++VA ET   T +V++ GEITT A VDY  + R+T + IG+ + D G+D   C VLV  ++QSPDIAQGV     +  +D    GAGDQG MFGYA DETPE MP     A +L  R
Sbjct:    5 FLFTSESVSEGHPDKVADQISDAILDAILAQDKYARVAAETLCNTGLVVLAGEITTSANVDYIHVARETIKRIGYDNTDYGIDYKGCAVLVAYDKQSPDIAQGV----DRASDDYLNQGAGDQGLMFGYACDETPELMPFPIYYAHRLVER 151          
BLAST of CK936053 vs. ExPASy Swiss-Prot
Match: METK_BIFLD (S-adenosylmethionine synthetase OS=Bifidobacterium longum (strain DJO10A) GN=metK PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 7.605e-37
Identity = 84/158 (53.16%), Postives = 103/158 (65.19%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV---------HGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLT 561
            L ++ESV EGHPDK+CDQISDA+LD  L QD  S VA ET   T + +VFGE+T++   D +  VR+T R+IG+ S +VGLDAD C V+V I +QS +I QGV              +R E  GAGDQG MFGYATDETP  MPL   LA +L  RLT
Sbjct:    7 LISAESVTEGHPDKVCDQISDAILDDLLAQDSSSHVAVETSAATGVFLVFGEVTSEGYCDVQSKVRETLRNIGYTSSEVGLDADSCGVVVAITEQSAEINQGVARLTDDQETAASREERYEAQGAGDQGVMFGYATDETPTLMPLPIYLAHRLAFRLT 164          
BLAST of CK936053 vs. ExPASy Swiss-Prot
Match: METK_SYNJA (S-adenosylmethionine synthetase OS=Synechococcus sp. (strain JA-3-3Ab) GN=metK PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 9.932e-37
Identity = 80/154 (51.95%), Postives = 102/154 (66.23%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPED------IGAGDQGHMFGYATDETPEFMPLSHVLATKLGARL 558
            +F+SESV EGHPDK+CDQISDA++DA L  DP S+VA E    T MV++ GEIT++A V++ ++VRD    IG+     G  A+ C VLV  ++QSPDIAQGV+     R         IGAGDQG MFG+A DETPE MPL   LA +L  +L
Sbjct:    1 MFSSESVTEGHPDKICDQISDAIVDALLTADPLSRVAAEVVVNTGMVILTGEITSQAHVNFTRLVRDKVAEIGYTDAKNGFSAESCAVLVAFDEQSPDIAQGVNLALESRTSQEDEFDLIGAGDQGLMFGFACDETPELMPLPISLAHRLSRQL 154          
BLAST of CK936053 vs. ExPASy Swiss-Prot
Match: METK_STRGG (S-adenosylmethionine synthetase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=metK PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 9.932e-37
Identity = 86/160 (53.75%), Postives = 100/160 (62.50%), Query Frame = 1
Query:  103 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPE-------DIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLT 561
            M   LFTSESV EGHPDK+ DQISD +LDA L +DP S+VA ET   T +V V GE+TTKA  D   +VR+    IG+ S   G D   C V V+I  QSPDIAQGV   + KR E         GAGDQG MFGYA DETPE MPL   +A +L  RL+
Sbjct:    1 MSRRLFTSESVTEGHPDKIADQISDTILDALLREDPTSRVAVETLITTGLVHVAGEVTTKAYADIPNLVRNKVLEIGYDSSKKGFDGASCGVSVSIGAQSPDIAQGVDTAYEKRVEGDEDELDKQGAGDQGLMFGYACDETPELMPLPIHVAHRLSRRLS 160          
BLAST of CK936053 vs. ExPASy Swiss-Prot
Match: METK_RHOSR (S-adenosylmethionine synthetase OS=Rhodococcus sp. (strain RHA1) GN=metK PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 9.932e-37
Identity = 86/157 (54.78%), Postives = 99/157 (63.06%), Query Frame = 1
Query:  115 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV-HGHFTKRPE-------DIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLT 561
            LFTSESV EGHPDK+CD ISD++LDA L  DP ++VA ET   T  V V GE+TT A  D  KIVRDT   IG+ S   G D + C V V I  QSP+IAQGV H H  +  E         GAGDQG MFG+AT +TPE MPL   LA +L  RLT
Sbjct:    8 LFTSESVTEGHPDKICDAISDSILDALLTDDPRARVAVETLVTTGQVHVAGEVTTSAYADIPKIVRDTVLEIGYDSSAKGFDGNSCGVNVAIGAQSPEIAQGVDHSHEVRTGELSDDEIDRQGAGDQGLMFGFATTDTPELMPLPIALAHRLSRRLT 164          
BLAST of CK936053 vs. ExPASy Swiss-Prot
Match: METK_RALEJ (S-adenosylmethionine synthetase OS=Ralstonia eutropha (strain JMP134) GN=metK PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 9.932e-37
Identity = 81/139 (58.27%), Postives = 99/139 (71.22%), Query Frame = 1
Query:  112 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDI---GAGDQGHMFGYATDETPEFMP 519
            FLFTSESV+EGHPDK+ DQISDAVLDA L QD  ++VA ET   T +V++ GEITT A VDY ++ RDT + IG+ + + G+D   C VLV  ++QSPDIAQGV     +  +D    GAGDQG MFGYA DETPE MP
Sbjct:    5 FLFTSESVSEGHPDKVADQISDAVLDAILAQDKYARVAAETLCNTGLVVLAGEITTTANVDYIQVARDTIKRIGYDNTEYGIDYKGCAVLVAYDKQSPDIAQGV----DRASDDYLNQGAGDQGLMFGYACDETPELMP 139          
The following BLAST results are available for this feature:
BLAST of CK936053 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_DESVH5.823e-3754.00S-adenosylmethionine synthetase OS=Desulfovibrio v... [more]
METK_BIFA05.823e-3752.50S-adenosylmethionine synthetase OS=Bifidobacterium... [more]
METK_STRSY7.605e-3753.16S-adenosylmethionine synthetase OS=Streptococcus s... [more]
METK_STRS27.605e-3753.16S-adenosylmethionine synthetase OS=Streptococcus s... [more]
METK_RALSO7.605e-3754.97S-adenosylmethionine synthetase OS=Ralstonia solan... [more]
METK_BIFLD7.605e-3753.16S-adenosylmethionine synthetase OS=Bifidobacterium... [more]
METK_SYNJA9.932e-3751.95S-adenosylmethionine synthetase OS=Synechococcus s... [more]
METK_STRGG9.932e-3753.75S-adenosylmethionine synthetase OS=Streptomyces gr... [more]
METK_RHOSR9.932e-3754.78S-adenosylmethionine synthetase OS=Rhodococcus sp.... [more]
METK_RALEJ9.932e-3758.27S-adenosylmethionine synthetase OS=Ralstonia eutro... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004387_E09 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0002_IF_E09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936053 ID=CK936053; Name=CK936053; organism=Citrus sinensis; type=EST; length=562bp
GGGGGCCCAAACTCAGTTGAGTTCCGCTTTGCTATTGAGGTCGGGTCTTA
AGTCTGAATCTTAGATCTGCGCCGAAACACTTGCCAGCCACAGCTTGATA
AGATGGAGACCTTTCTATTCACCTCTGAATCTGTGAACGAGGGTCACCCC
GACAAGTTGTGCGACCAGATCTCTGATGCGGTGCTTGATGCCTGCCTTGA
GCAGGATCCTGAGAGCAAGGTTGCCTGTGAGACATGCACCAAGACCAACA
TGGTCATGGTCTTTGGAGAGATTACCACCAAGGCCAAGGTAGACTATGAG
AAGATTGTTCGCGACACTTGCCGTTCCATTGGATTTGTTTCTGATGATGT
GGGTCTTGATGCCGATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAA
GCCCTGATATTGCCCAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAG
GACATTGGTGCTGGTGACCAGGGCCATATGTTTGGTTATGCTACTGATGA
GACCCCTGAATTTATGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTG
CTCGTCTCACGG
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