CK936084

Overview
NameCK936084
Unique NameCK936084
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length826
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936084 vs. ExPASy Swiss-Prot
Match: MAO4_BACSU (Probable NAD-dependent malic enzyme 4 OS=Bacillus subtilis GN=ytsJ PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.761e-15
Identity = 75/247 (30.36%), Postives = 115/247 (46.56%), Query Frame = 2
Query:  104 IQFEDFANHNAFDLLE--KYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKK---PWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASG-SPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAA 826
            +  ED A  N F + E  K  T   VF+DD  GTA V +AGL++A+K  G S++  + +  GAG AG  I +L+                + I + DSKG I   R   +   K     + ++      L D +  +   + IG S  G   TKE+V++MA   + PIIF+++NP    E   E+A     G ++  +G S F           P Q NN   FPG+  G +   A  ++++M +AA
Sbjct:  130 VNLEDIAAPNCFIIEERLKKETNIPVFHDDQHGTAIVTVAGLVNALKLSGKSMSSIKVVANGAGAAGIAIIKLLH-----------HYGVRDIVMCDSKGAIYEGRPNGMNDVKNEVAKFTNQDRKDGSLKDVI--VDADVFIGVSVAG-ALTKEMVQSMA---KDPIIFAMANP--NPEIMPEDAR--EAGASVVGTGRSDF-----------PNQVNNVLAFPGIFRGALDVRATHINEEMKIAA 344          
BLAST of CK936084 vs. ExPASy Swiss-Prot
Match: MAO2_HAEIN (NADP-dependent malic enzyme OS=Haemophilus influenzae GN=maeB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.174e-14
Identity = 63/218 (28.90%), Postives = 102/218 (46.79%), Query Frame = 2
Query:  173 VFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAA 826
            VF+DD  GTA +  A +I++++ +G  + D R +  GAG A      L+         + L   R+ I + DSKG++   R + +   KK +A E    ++L DA+      I +G S  G   T+++V++MA+    PII +L+NP    E T  EA        +    S +           P Q NN   FP +  G +  GA  ++++M  AA
Sbjct:  158 VFHDDQHGTAIISAAAIINSLRIVGKKIEDVRLVASGAGAASIACLNLL---------LSLGMKRENITVCDSKGVVYKGRDDKMDQTKKEYAIEDNGWRKLADAIP--NADIFLGCSAAG-ALTQDMVKSMAA---HPIILALANP--NPEITPPEAKAVRPDAIVCTGRSDY-----------PNQVNNVLCFPFIFRGALDVGATTINEEMKRAA 347          
BLAST of CK936084 vs. ExPASy Swiss-Prot
Match: MAO2_RICPR (Probable NADP-dependent malic enzyme OS=Rickettsia prowazekii GN=RP373 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.404e-13
Identity = 79/259 (30.50%), Postives = 123/259 (47.49%), Query Frame = 2
Query:   59 EFMTAVKQNYGERILIQFEDFANHNAFDLLEKYGTTH--LVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAE-LIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAA 826
            EF+ AVK        I  ED      F + EK  +     VF+DD  GTA +  AGLI+A      +L D + +  GAG A     + LIAL + K           KI L D+KG+I   R   +  +K+ +A + + ++ L +++N     + IG S +G   TK+++  MA    KPIIF+++NP    E T E+   + +  AI A+G      +Y +      Q NN   FP +  G +   A  ++ +M +AA
Sbjct:  121 EFINAVKYLGYSFGGINLEDIKAPECFLIEEKLKSLMDIPVFHDDQHGTAIITAAGLINAAYLTNRTLKDLKIVINGAGAAAIACIDLLIALGVDK----------SKIILCDTKGVIYKGRTSGMNKWKERYASDTK-IRTLTESLN--NADVFIGLSVKG-AVTKDMISKMA---HKPIIFAMANP--DPEITPED-IKFVRDDAIIATGRS----DYNN------QVNNVMGFPYIFRGALDVRASTINTEMKIAA 349          
BLAST of CK936084 vs. ExPASy Swiss-Prot
Match: MAO1_RHIME (NAD-dependent malic enzyme OS=Rhizobium meliloti GN=dme PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.995e-13
Identity = 60/218 (27.52%), Postives = 98/218 (44.95%), Query Frame = 2
Query:  173 VFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAA 826
            VF+DD  GTA +V A +++ ++  G  +A+ + +  GAG A      L+         + L   R+ IW+ D +GL+   R   +  +K  +A E +  + L D++      + +G S  G        E +A + EKP+I +L+NPT   E   E A        I    S F           P Q NN   FP +  G +  GA  ++++M +AA
Sbjct:  171 VFHDDQHGTAIIVAAAVLNGLELAGKDIAEAKIVASGAGAAALACLNLL---------VTLGARRENIWVHDIEGLVYKGREALMDEWKAVYAQESDN-RVLADSIGG--ADVFLGLSAAGVL----KPELLARMAEKPLIMALANPT--PEIMPEVARAARPDAMICTGRSDF-----------PNQVNNVLCFPHIFRGALDCGARTINEEMKMAA 359          
The following BLAST results are available for this feature:
BLAST of CK936084 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 144
Match NameE-valueIdentityDescription
MAO4_BACSU9.761e-1530.36Probable NAD-dependent malic enzyme 4 OS=Bacillus ... [more]
MAO2_HAEIN2.174e-1428.90NADP-dependent malic enzyme OS=Haemophilus influen... [more]
MAO2_RICPR2.404e-1330.50Probable NADP-dependent malic enzyme OS=Rickettsia... [more]
MAO1_RHIME6.995e-1327.52NAD-dependent malic enzyme OS=Rhizobium meliloti G... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004387_A07 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0002_IF_A07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936084 ID=CK936084; Name=CK936084; organism=Citrus sinensis; type=EST; length=826bp
GGGCATTGGGCTCAGGCTGAAGAGGGCTATTGGACAGGAATATGCTGAAT
TGCTACATGAATTCATGACAGCTGTGAAGCAGAATTATGGGGAGAGAATT
CTCATTCAGTTTGAAGACTTTGCAAACCACAATGCCTTTGATCTGCTTGA
AAAATATGGCACTACTCATCTTGTTTTCAATGATGATATTCAGGGGACAG
CATCTGTGGTCCTTGCAGGTCTTATTTCAGCGATGAAATTTCTTGGAGGA
AGCTTAGCTGACCAAAGATTTTTATTCCTAGGTGCAGGAGAAGCTGGCAC
TGGAATAGCAGAACTCATAGCTCTTGAGATATCCAAACAGACAAATATGC
CGCTAGAAGAGACTCGCAAGAAGATTTGGCTTGTGGATTCAAAGGGATTG
ATCGTCAGTTCCCGTTTAGAATCTCTCCAACATTTCAAAAAGCCGTGGGC
TCATGAACATGAACCTGTTAAGGAACTAGTAGATGCCGTTAATGCAATCA
AGCCAACAATTCTGATTGGAACATCAGGACAAGGTCGAACATTTACTAAA
GAAGTTGTTGAGGCTATGGCCTCCTTGAATGAGAAACCCATTATTTTTTC
TCTTTCCAACCCAACTTCACAGTCTGAATGCACCGCAGAAGAAGCCTATA
CGTGGAGCCAGGGCCGAGCCATTTTTGCAAGTGGGAGCCCCTTTGACCCT
TTCGAATATGGGGACAATGTTTTTGTGCCTGGCCAGGCAAATAATGCATA
CATTTTCCCTGGACTTGGTTTGGGGTTAATAATGTCTGGTGCAATCCGTG
TTCATGATGACATGCTTCTGGCAGCN
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