CK936087

Overview
NameCK936087
Unique NameCK936087
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length581
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936087 vs. ExPASy Swiss-Prot
Match: AQP1_MOUSE (Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3)

HSP 1 Score: 78.1814 bits (191), Expect = 3.297e-14
Identity = 55/167 (32.93%), Postives = 81/167 (48.50%), Query Frame = 3
Query:   90 FKAYLAEFISTLLFVFAGVGSAIAFNKVTADAALDPSGLVAIAICHXXXXXXXXXXXXNISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGL---AVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIXPIAIGXIV 581
            ++A +AEF++  LFVF  +GSA+ FN             V +++              +ISG H+NPAVT GL L  QI+IL  + Y IAQ +G+IVA+ +L  +T  L   ++  ++                 T  LV  V AT  D ++  LG   P+AIG  V
Sbjct:   11 WRAVVAEFLAMTLFVFISIGSALGFNYPLERNQTLVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVATAILSGITSSLVDNSLGRNDLAHGVNSGQGLGIEIIGTLQLVLCVLAT-TDRRRRDLGGSAPLAIGLSV 176          
BLAST of CK936087 vs. ExPASy Swiss-Prot
Match: PIP23_MAIZE (Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.306e-14
Identity = 57/178 (32.02%), Postives = 84/178 (47.19%), Query Frame = 3
Query:   90 FKAYLAEFISTLLFVFAGVGSAIAFNKVTADAALDPS------GLVAIAICHXXXXXXXXXXXXNISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAV----PTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGS----LGTIXPIAIGXIV 581
            ++A +AEFI+TLLF++  V + I +   T  AA  P       G++ IA                ISGGH+NPAVTFGL L  +++++  + Y IAQ LG+I    L+K       V      +                  TF LVYTV+ +A DPK+ +    +  + P+ IG  V
Sbjct:   41 YRAVIAEFIATLLFLYITVATVIGYKHQTDAAASGPDAACGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVKGFQSAYYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAV 217          
BLAST of CK936087 vs. ExPASy Swiss-Prot
Match: PIP22_ORYSJ (Probable aquaporin PIP2-2 OS=Oryza sativa subsp. japonica GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.306e-14
Identity = 56/178 (31.46%), Postives = 83/178 (46.63%), Query Frame = 3
Query:   90 FKAYLAEFISTLLFVFAGVGSAIAFNKV------TADAALDPSGLVAIAICHXXXXXXXXXXXXNISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAV----PTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGS----LGTIXPIAIGXIV 581
            ++A +AEFI+TLLF++  V + I +         T DAA    G++ IA                ISGGH+NPAVTFGL L  +++++  + Y IAQ LG+I    L+K              +                  TF LVYTV+ +A DPK+ +    +  + P+ IG  V
Sbjct:   40 YRAVIAEFIATLLFLYITVATVIGYKHQSDATVNTTDAACSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYIIAQCLGAICGVGLVKGFQSSYYARYGGGANELSDGYSKGTGLGAEIIGTFVLVYTVF-SATDPKRNARDSHIPVLAPLPIGFAV 216          
BLAST of CK936087 vs. ExPASy Swiss-Prot
Match: AQP1_SHEEP (Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3)

HSP 1 Score: 77.7962 bits (190), Expect = 4.306e-14
Identity = 56/172 (32.56%), Postives = 83/172 (48.26%), Query Frame = 3
Query:   90 FKAYLAEFISTLLFVFAGVGSAIAFN-----KVTADAALDPSGLVAIAICHXXXXXXXXXXXXNISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGL---AVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIXPIAIGXIV 581
            ++A +AEF++ +LF+F  +GSA+ F+       T  A  D    V +++              +ISG H+NPAVT GL L  QI+IL  I Y IAQ +G+IVA+ +L  +T  L   ++  +                  T  LV  V AT    ++  LG   P+AIG  V
Sbjct:   11 WRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDN---VKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAIMYIIAQCVGAIVATVILSGITSSLPDNSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRRDLGDSGPLAIGFSV 179          
BLAST of CK936087 vs. ExPASy Swiss-Prot
Match: PIP26_MAIZE (Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 5.624e-14
Identity = 55/178 (30.90%), Postives = 83/178 (46.63%), Query Frame = 3
Query:   90 FKAYLAEFISTLLFVFAGVGSAIAFNKVT------ADAALDPSGLVAIAICHXXXXXXXXXXXXNISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAV----PTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGS----LGTIXPIAIGXIV 581
            ++A +AEF++TLLF++  V + I +   T       DAA    G++ IA                ISGGH+NPAVTFGL L  +++++  + Y  AQ LG+I    L+K    G         +                  TF LVYTV+ +A DPK+ +    +  + P+ IG  V
Sbjct:   40 YRAVIAEFVATLLFLYITVATVIGYKHQTDASASGPDAACSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYMAAQSLGAICGVALVKGFQSGFYARYGGGANEVSAGYSTGTGLAAEIIGTFVLVYTVF-SATDPKRNARDSHVPVLAPLPIGFAV 216          
BLAST of CK936087 vs. ExPASy Swiss-Prot
Match: PIP24_MAIZE (Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 5.624e-14
Identity = 57/178 (32.02%), Postives = 84/178 (47.19%), Query Frame = 3
Query:   90 FKAYLAEFISTLLFVFAGVGSAIAFNKVT------ADAALDPSGLVAIAICHXXXXXXXXXXXXNISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAV----PTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGS----LGTIXPIAIGXIV 581
            ++A +AEFI+TLLF++  V + I +   T       DAA    G++ IA                ISGGH+NPAVTFGL L  +++++  + Y IAQ LG+I    L+K       V      +                  TF LVYTV+ +A DPK+ +    +  + P+ IG  V
Sbjct:   40 YRAVIAEFIATLLFLYITVATVIGYKHQTDASASGPDAACGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVKGFQSAYYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAV 216          
BLAST of CK936087 vs. ExPASy Swiss-Prot
Match: PIP23_ORYSJ (Probable aquaporin PIP2-3 OS=Oryza sativa subsp. japonica GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 5.624e-14
Identity = 54/178 (30.34%), Postives = 85/178 (47.75%), Query Frame = 3
Query:   90 FKAYLAEFISTLLFVFAGVGSAIAFNKVT------ADAALDPSGLVAIAICHXXXXXXXXXXXXNISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAV----PTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGS----LGTIXPIAIGXIV 581
            ++A +AEF++TLLF++  V + I +   +      ADAA    G++ IA                +SGGH+NPAVTFGL L  +++++  + Y +AQ LG+I    L+K       V      +                  TF LVYTV+ +A DPK+ +    +  + P+ IG  V
Sbjct:   41 YRAVIAEFVATLLFLYITVATVIGYKHQSDPGANAADAACSGVGILGIAWAFGGMIFILVYCTAGVSGGHINPAVTFGLFLARKVSLVRAVLYIVAQSLGAICGVGLVKGFQSAFYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVF-SATDPKRNARDSHVPVLAPLPIGFAV 217          
BLAST of CK936087 vs. ExPASy Swiss-Prot
Match: PIP25_MAIZE (Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 9.593e-14
Identity = 54/178 (30.34%), Postives = 84/178 (47.19%), Query Frame = 3
Query:   90 FKAYLAEFISTLLFVFAGVGSAIAFNKVTADAALDPS------GLVAIAICHXXXXXXXXXXXXNISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAV----PTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGS----LGTIXPIAIGXIV 581
            ++A +AEF++TLLF++  V + I +   T  AA  P       G++ IA                +SGGH+NPAVTFGL L  +++++  + Y +AQ LG+I    L+K       V      +                  TF LVYTV+ +A DPK+ +    +  + P+ IG  V
Sbjct:   36 YRAVIAEFVATLLFLYITVATVIGYKHQTDAAASGPDAACGGVGVLGIAWAFGGMIFILVYCTAGVSGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAICGVGLVKGFQSAFYVRYGGGANELSAGYSKGTGLAAEIIGTFVLVYTVF-SATDPKRNARDSHVPVLAPLPIGFAV 212          
BLAST of CK936087 vs. ExPASy Swiss-Prot
Match: AQP1_PONAB (Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3)

HSP 1 Score: 76.6406 bits (187), Expect = 9.593e-14
Identity = 53/167 (31.74%), Postives = 80/167 (47.90%), Query Frame = 3
Query:   90 FKAYLAEFISTLLFVFAGVGSAIAFNKVTADAALDPSGLVAIAICHXXXXXXXXXXXXNISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGL---AVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIXPIAIGXIV 581
            ++A +AEF++  LFVF  +GSA+ F     +        V +++              +ISG H+NPAVT GL L  QI+I   + Y IAQ +G+IVA+ +L  +T  L   ++  ++                 T  LV  V AT  D ++  LG   P+AIG  V
Sbjct:   11 WRAVVAEFLAMTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLPGNSLGRNDLADGVNSGQGLGIEIIGTLQLVLCVLAT-TDRRRRDLGGSAPLAIGLSV 176          
BLAST of CK936087 vs. ExPASy Swiss-Prot
Match: PIP26_ORYSJ (Probable aquaporin PIP2-6 OS=Oryza sativa subsp. japonica GN=PIP2-6 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 1.636e-13
Identity = 54/175 (30.86%), Postives = 84/175 (48.00%), Query Frame = 3
Query:   90 FKAYLAEFISTLLFVFAGVGSAIAFNKVTADAALDPSGLVAIAICHXXXXXXXXXXXXNISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVV-------TGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGS----LGTIXPIAIGXIV 581
            ++A +AEFI+TLLF++  V + I +   ++       G + IA                ISGGH+NPAVTFGL L  +++++  + Y +AQ LG IV   ++K +        GG A   +                  TF LVYTV+ +A DPK+ +    +  + P+ IG  V
Sbjct:   37 YRALIAEFIATLLFLYITVATVIGYKVQSSADQCGGVGTLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVSVIRAVMYIVAQCLGGIVGVGIVKGIMKHQYNANGGGA---NMVASGYSTGTALGAEIIGTFVLVYTVF-SATDPKRNARDSHVPVLAPLPIGFAV 207          
The following BLAST results are available for this feature:
BLAST of CK936087 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 104
Match NameE-valueIdentityDescription
AQP1_MOUSE3.297e-1432.93Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3[more]
PIP23_MAIZE4.306e-1432.02Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1[more]
PIP22_ORYSJ4.306e-1431.46Probable aquaporin PIP2-2 OS=Oryza sativa subsp. j... [more]
AQP1_SHEEP4.306e-1432.56Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3[more]
PIP26_MAIZE5.624e-1430.90Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1[more]
PIP24_MAIZE5.624e-1432.02Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1[more]
PIP23_ORYSJ5.624e-1430.34Probable aquaporin PIP2-3 OS=Oryza sativa subsp. j... [more]
PIP25_MAIZE9.593e-1430.34Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1[more]
AQP1_PONAB9.593e-1431.74Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3[more]
PIP26_ORYSJ1.636e-1330.86Probable aquaporin PIP2-6 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004387_A10 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0002_IF_A10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936087 ID=CK936087; Name=CK936087; organism=Citrus sinensis; type=EST; length=581bp
TTTTTTTTTTTTCCTATTCTCTAGCTCTTTCTTGATCAACAATGGCTATT
GCCTTCGGCCGCTTCGATGATTCTTTCAGCTTAGGCTCCTTCAAGGCCTA
TCTTGCTGAGTTTATCTCAACTTTGCTCTTTGTTTTCGCCGGCGTTGGCT
CGGCCATTGCTTTCAACAAGGTGACAGCAGATGCAGCACTTGATCCATCA
GGGCTAGTAGCCATAGCTATTTGCCATGGATTTGCTCTATTTGTCGCTGT
TGCAGTTGGTGCTAACATCTCAGGTGGCCACGTCAACCCAGCCGTCACCT
TTGGATTGGCTCTTGGTGGCCAAATCACCATCCTCACTGGCATCTTCTAC
TGGATTGCCCAACTTCTTGGCTCTATTGTTGCCAGCTTCCTCCTCAAAGT
TGTCACTGGAGGATTGGCAGTTCCTACCCACAATGTTGCTGCTGGAGTTG
GAGCCATTGAAGGAGTTGTGATGGAGATCATCATCACATTTGGTTTGGTC
TACACGGTCTATGCCACGGCAGCTGACCCGAAGAAGGGATCATTGGGCAC
CATTNCACCCATTGCCATTGGTNNNATTGTC
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