CK936089

Overview
NameCK936089
Unique NameCK936089
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CK936089 vs. ExPASy Swiss-Prot
Match: OMT4_DICDI (O-methyltransferase 4 OS=Dictyostelium discoideum GN=omt4 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.136e-12
Identity = 43/140 (30.71%), Postives = 71/140 (50.71%), Query Frame = 3 
Query:  474 GELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSY---PGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILKELLQS 884
            GE   +K+LG++ +  L       E F N M   +S  I   ++ +  F    ++VD+             KYP+  GINFD+      A      P +EH  G+ ++ +PEGD  ++K +LH++ DE+CIKIL+ + +S
Sbjct:  127 GEPQCHKSLGVNSWWDLIKKPGEEEFFKNAMKVSSSEAIESALK-FIDFSPFKKIVDIGGSHGRFVCEILEKYPNSHGINFDLESFFNGAGELIKNPRLEHKSGNFFESVPEGDCYILKRILHDWKDEDCIKILETIGKS 265
The following BLAST results are available for this feature:
BLAST of CK936089 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
OMT4_DICDI5.136e-1230.71O-methyltransferase 4 OS=Dictyostelium discoideum ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004387_A12 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0002_IF_A12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936089 ID=CK936089; Name=CK936089; organism=Citrus sinensis; type=EST; length=897bp
GGGGAAAGCAAAGCAGGATCAAGAAATTAAACGCGCAAATGGGTTCTTTC
ACTAAGAGCAAATCAAAAGTGACCAATGAAGAGGAAGAGGTATATTCACA
TGCCATGGTACTGGGAAGTGCAATAGTGCTACCCGCGGTTTTTCAAGCAG
TAGTAAATCTTGATGTTCTTGATATCATAAACAAAGCTGGTCCTGGTGCT
GAGCTTTCTGCTTCAGAGATTGCTTCTCAAATTCCCACCAAAAATCCTGA
GGGTGCTGCCAAGATGTTGGATCGGGTTCTCGGGCTTCTGGTGAGCTTCA
ATATCCTTTGTTGCTCTTTCAGTACTCATGGAGTAAGGCTCTACAGTCTC
GCTCCTGTCGCTAAATACTATGTGAGTGATCAAAACGGCGTCTCAATGCG
TCCCTATATGAACTTGTCTCTTGACAAAGTAATGATGCCTGGCTGGTTCC
AATTGAAAGACCAAATTCTTGAAGGAGAACTTTCGTATAATAAAGCCCTC
GGAATGGATTTCTACGATTATCTGGGCACCGACTCCAGGTTCAATGAAGT
TTTCAACAATGGAATGATCGGCCAGACTTCTTTTGTAATCAATAAGATTG
TAGAATCCTACAAAGGCTTTCAGAATATTACGCGCCTTGTTGACGTTGGC
GGTGGTTTAGGAATCACCCTTGCGACTACAATTTCCAAATACCCTCATAT
TAAGGGTATTAATTTTGACGTACCTCATGTTATAAAAGATGCCTCATCTT
ATCCCGGCATGGAACATGTTGGCGGAGATATGTACCAAAAAATTCCAGAG
GGGGATGCCATTTTAATGAAGTGGATGCTTCATAATTTTGATGATGAGAA
TTGCATAAAGATACTGAAGGAATTGTTACAAAGCTCTTCCAAATGAT
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