CK936094

Overview
NameCK936094
Unique NameCK936094
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK936094 vs. ExPASy Swiss-Prot
Match: PUP3_ARATH (Purine permease 3 OS=Arabidopsis thaliana GN=PUP3 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.398e-17
Identity = 59/205 (28.78%), Postives = 90/205 (43.90%), Query Frame = 2
Query:  251 LVVVNIFFLIAGQAAAVILGRYYYDQGGNSKWLATLVQTAAXXXXXXXXXXXXA----SQEVSSSSRYPSFVTLALVYLVLGAILAG-DNMLYYVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTXXXXXXXXXXXXXXXXXXXXEGSEGPSKVSKWKYILGFISTVGASAIYXXXXXXXXXXFQKVLKRQSFGVVXXMQI 850
            LV++N   L  G     ++ R Y++ GG   W +T ++TA                  S  V  S+ +       L+  V+  IL+G DN LY  G+ YL  ST +LI ASQLAF A+FS+F+   KFT                      ++ P   +  +YI GF+ TV A+ +Y          +QK  +  S+ +V   Q+
Sbjct:    5 LVIINCIILAIGNCGGPLIMRLYFNNGGKRIWFSTFLETAGFPVIFIPLLFSYITRRRSNNVGDSTSFFLIKPRLLIAAVIVGILSGFDNYLYAYGIAYLPVSTAALIIASQLAFIAIFSFFMVKHKFTPFTINAVVLLTVGAAVLGMHTETDKPVHETHKQYITGFLITVAAAVMYAFILPLVELAYQKAKQTMSYTLVLEFQL 209          
BLAST of CK936094 vs. ExPASy Swiss-Prot
Match: PUP1_ARATH (Purine permease 1 OS=Arabidopsis thaliana GN=PUP1 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.433e-16
Identity = 56/211 (26.54%), Postives = 91/211 (43.13%), Query Frame = 2
Query:  251 LVVVNIFFLIAGQAAAVILGRYYYDQGGNSKWLATLVQTAAXXXXXXXXXXXXASQEVSS-----------SSRYPSFVTLALVYLVLGAILAGDNMLYYVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTXXXXXXXXXXXXXXXXXXXXEGSEGPSKVSKWKYILGFISTVGASAIYXXXXXXXXXXFQKVLKRQSFGVVXXMQI 850
            L+++N   L  G     +L R Y+  GG   W  + + TA              S+  S+           +  +     L +  +V+G +   DN LY  GL YL  ST SLI  +QLAFNA+F++ +  QKFT                       + P+K SK +Y++GF+ TV A+ +Y          ++K  +  +F +V  +Q+
Sbjct:    5 LIIINCIILTIGTCGGPLLTRLYFTNGGKRIWFMSFLSTAGFPIILIPLLVSFLSRRRSNRNPNNAENKRKTKLFLMETPLFIASIVIGLLTGLDNYLYSYGLAYLPVSTSSLIIGTQLAFNALFAFLLVKQKFTPFSINAVVLLTVGIGILALHSDGDKPAKESKKEYVVGFLMTVVAALLYAFILPLVELTYKKARQEITFPLVLEIQM 215          
BLAST of CK936094 vs. ExPASy Swiss-Prot
Match: PUP5_ARATH (Probable purine permease 5 OS=Arabidopsis thaliana GN=PUP5 PE=2 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 2.444e-16
Identity = 57/207 (27.54%), Postives = 88/207 (42.51%), Query Frame = 2
Query:  230 KSWQWWVLVVVNIFFLIAGQAAAVILGRYYYDQGGNSKWLATLVQTAAXXXXXXXXXXXXASQEVSSSSRYPSFVTLALVYLVLGAILAGDNMLYYVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTXXXXXXXXXXXXXXXXXXXXEGSEGPSKVSKWKYILGFISTVGASAIYXXXXXXXXXXFQKVLKRQSFGVVXXMQI 850
            K +  W+L+  +   ++    A+ +L R Y+  GG SKW+ + V  A               Q++  +   P    L L Y+VLG + A DN++Y     YL AST SL+ +S LAF+A+F Y I                            S+  S +S  +Y  GF   +  SA++          F K+L R+SF V    Q+
Sbjct:   32 KPFSHWILLFFSGAAMLIAFPASSLLSRLYFSNGGKSKWIISWVAVAGWPITCLILLPTYIFQKIKPT---PLNTKLVLSYVVLGFLSAADNLMYAYAYAYLPASTSSLLASSSLAFSALFGYLIVKNPLNASVINSIVVITGAMAIIALDSSSDRYSYISNSQYFAGFFWDIMGSALHGLIFALSELLFVKLLGRRSFHVALEQQV 235          
BLAST of CK936094 vs. ExPASy Swiss-Prot
Match: PUP2_ARATH (Purine permease 2 OS=Arabidopsis thaliana GN=PUP2 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.584e-15
Identity = 53/206 (25.73%), Postives = 91/206 (44.17%), Query Frame = 2
Query:  248 VLVVVNIFFLIAGQAAAVILGRYYYDQGGNSKWLATLVQTAAXXXXXXXXXXXXASQE--VSSSSRYPSFVT---LALVYLVLGAILAGDNMLYYVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTXXXXXXXXXXXXXXXXXXXXEGSEGPSKVSKWKYILGFISTVGASAIYXXXXXXXXXXFQKVLKRQSFGVVXXMQI 850
            VLV++N  FL  G     ++ R Y+  GG   W  + +QT                +   +      P F+    L +  +V+G ++  DN LY  GL Y+  ST SLI ++QL F A+F++F+  QKFT                      S+  +  +  +Y++GFI T+GA+ +Y          ++K  +R ++ +    Q+
Sbjct:    6 VLVIINCIFLAIGNCGGPLMMRLYFQNGGERIWFPSFLQTVGCPLIFFPLLLSFLRRRRCLEEQETTPFFLMKPPLFIAAIVVGLLVGFDNYLYSYGLAYIPVSTASLIISAQLGFTALFAFFMVKQKFTPFTINAIVLLTGGAVVLALNSDSDKLANETHKEYVVGFIMTLGAALLYGFILPLVELSYKKSGQRITYTLALEFQM 211          
BLAST of CK936094 vs. ExPASy Swiss-Prot
Match: PUP18_ARATH (Probable purine permease 18 OS=Arabidopsis thaliana GN=PUP18 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.141e-12
Identity = 66/247 (26.72%), Postives = 111/247 (44.94%), Query Frame = 2
Query:  167 NEEPMIIDKYLTNQSPLFRKLKSWQWWVLVVVNIFFLIAGQAAAVILGRYYYDQGGNSK----------WLATLVQTAAXXXXXXXXXXXXASQE--VSSSSRYPSFVTLALVYLVLGAILAGDNMLYYVGLLYLSASTYSLICASQLAFNAVFSYFINSQKFTXXXXXXXXXXXXXXXXXXXXEGSEGPSKVSKWKYILGFISTVGASAIYXXXXXXXXXXFQKVL-------KRQSFGVVXXMQI 850
            N EP   D+ L+ +  L  +LK  +WW+ V + IF ++ G +  ++L  ++Y Q               WL  LVQ AA            + ++   ++++R+ SF  L L+Y+ LG ++A  + L+ +G LY +   ++LI A+QL F A+F+  IN  KFT                     G E P +  ++  I  ++ T  AS  +          F+KVL        ++ F +V  MQI
Sbjct:   17 NPEP---DQILSPRRSL--ELKQKKWWISVSLCIFLVLLGDSLVMLLLNFFYVQDNREDSDQDLQYRGTWLQALVQNAAFPLLIPLFFIFPSPKQNQETTNTRFLSF-RLILLYISLGVLVAAHSKLFALGKLYANFGVFTLISATQLIFTAIFAAIINRFKFTRWIILSIIGSILIYVFGSPEFGGE-PDENEEFYSIQAWL-TFAASVAFALSLCLFQLCFEKVLVKTKRYGNKKVFRMVIEMQI 255          
The following BLAST results are available for this feature:
BLAST of CK936094 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
PUP3_ARATH8.398e-1728.78Purine permease 3 OS=Arabidopsis thaliana GN=PUP3 ... [more]
PUP1_ARATH1.433e-1626.54Purine permease 1 OS=Arabidopsis thaliana GN=PUP1 ... [more]
PUP5_ARATH2.444e-1627.54Probable purine permease 5 OS=Arabidopsis thaliana... [more]
PUP2_ARATH1.584e-1525.73Purine permease 2 OS=Arabidopsis thaliana GN=PUP2 ... [more]
PUP18_ARATH2.141e-1226.72Probable purine permease 18 OS=Arabidopsis thalian... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004386_H10 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0003_IVF_H10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK936094 ID=CK936094; Name=CK936094; organism=Citrus sinensis; type=EST; length=857bp
GGGGATGCGTAACACACGTGGACTCTGTTGATGGGTTCAATTTCATCGGA
AATTTCGGCTTCAATTGAATCTCGGCAGCCGTGAAAACAACTGCCACGCA
TCTGATTCCATGGCTCGAGCTTCGTTCAGTTCGTGCGGCTATAAATCTTT
GAACAGCATGGCAGATAATGAAGAACCGATGATTATAGACAAATATTTAA
CCAACCAATCACCATTATTTCGTAAACTCAAGAGCTGGCAATGGTGGGTT
TTGGTGGTAGTTAACATTTTCTTCCTCATCGCAGGCCAGGCTGCTGCTGT
TATTTTAGGAAGATATTATTATGATCAGGGTGGAAACAGTAAATGGTTGG
CCACCCTTGTGCAAACTGCTGCCTTTCCAATCCTCTACATCCCTCTCTTT
CTTCTCCCTGCTTCTCAAGAGGTTTCATCTTCTTCTAGATATCCTTCTTT
TGTGACTCTTGCCTTGGTTTACTTAGTTCTTGGAGCAATATTAGCCGGTG
ACAACATGTTGTATTATGTTGGGCTGTTGTACCTTTCTGCCTCTACCTAT
TCCCTCATTTGTGCAAGCCAATTGGCTTTTAATGCTGTTTTCTCTTACTT
CATCAATTCTCAGAAATTCACTGCCTTAATCCTCAACTCTGTTGTCATCC
TCTCTTTATCTGCTGCTCTCATTGCAGTCAATGAAGGTTCTGAAGGACCA
TCAAAAGTGTCAAAGTGGAAATATATACTCGGCTTCATTTCTACCGTTGG
AGCTTCTGCAATTTACTCTCTTTTGCTTTCTCTGATGCAGCTTTCCTTCC
AGAAGGTGCTGAAAAGGCAAAGTTTTGGTGTGGTTNNNNNTATGCAAATT
TATACTT
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