CK936100
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK936100 vs. ExPASy Swiss-Prot
Match: PSMB_METTE (Proteasome subunit beta OS=Methanosarcina thermophila GN=psmB PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 9.132e-29 Identity = 66/197 (33.50%), Postives = 118/197 (59.90%), Query Frame = 2 Query: 119 KHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFS-VGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATPRDAASGGVASVYYVGPNGWKKLSGDD 706 K+ KGTTT+ + +G+++A++ RA+MG +I+S++ KK+ +I+ + T AG D Q R + ++ +L+++ +++ G + L++N L R + V +I G D+ GPG+Y +D+ GG ++ TR S GSGSP AYGVL+ Y+ +M++ I++AT RD+ASG V + +K+L ++ Sbjct: 5 KYLKGTTTVGVVCTDGIVLASEQRATMGHFIASKTAKKVYQIDDLVGMTTAGSVGDAQQLVRLVSVESQLYKMRRDESMTIKGITTLMSNFLSRNRYYPMMVQLLIGGVDKNGPGIYSLDAMGGSIEETRISATGSGSPMAYGVLEDQYRENMTVKEGLDLAIRAIHNATKRDSASGENIDVVVITKEAFKRLDPEE 201
BLAST of CK936100 vs. ExPASy Swiss-Prot
Match: PSMB_METTH (Proteasome subunit beta OS=Methanobacterium thermoautotrophicum GN=psmB PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.248e-26 Identity = 69/194 (35.57%), Postives = 103/194 (53.09%), Query Frame = 2 Query: 128 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATPRDAASG-GVASVYYVGPNGWKKLSGDD 706 KGTTT+ K+GV+ A + RASMG I+ ++ KI +I+ ++ T+AG AD Q + L + L+ + N +IS+ A+ L ANIL+S R V T++ G DE G +Y +D GG + S GSGSP AYGVL+ Y ++ + I A RD SG G+ G++ LS ++ Sbjct: 8 KGTTTVGITCKDGVVFATERRASMGNLIAHKATDKIFKIDEHIAATIAGSVADAQSLMKYLKAEAALYRMRNSEKISIEAAAALAANILHSSRFYPFIVQTLLGGVDENGAKIYSLDPSGGMIPDKFVSTGSGSPVAYGVLEDRYSDELYVDEAVDVAIRAIKSAMERDTYSGNGILVATVTEEEGFRMLSEEE 201
BLAST of CK936100 vs. ExPASy Swiss-Prot
Match: PSMB_ARCFU (Proteasome subunit beta OS=Archaeoglobus fulgidus GN=psmB PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.782e-24 Identity = 64/174 (36.78%), Postives = 98/174 (56.32%), Query Frame = 2 Query: 128 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRF-SVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATPRDAASG 646 KGTTT+ + K+GV++A + RA+MG +I+S++ KKI +I M T AG D QF R + I+ L+E+ +R+ +V + L +N+L SYR V +I G D G +Y +D GG ++ + GSGS AYGVL+ + ++ + IY A RD+ASG Sbjct: 10 KGTTTVGLVCKDGVVMATEKRATMGNFIASKAAKKIYQIADRMAMTTAGSVGDAQFLARIIKIEANLYEIRRERKPTVRAIATLTSNLLNSYRYFPYLVQLLIGGIDSEGKSIYSIDPIGGAIEEKDIVATGSGSLTAYGVLEDRFTPEIGVDEAVELAVRAIYSAMKRDSASG 183
BLAST of CK936100 vs. ExPASy Swiss-Prot
Match: PSMB_METJA (Proteasome subunit beta OS=Methanocaldococcus jannaschii GN=psmB PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.339e-22 Identity = 66/189 (34.92%), Postives = 100/189 (52.91%), Query Frame = 2 Query: 128 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLKGTRF-SVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATPRDAASGGVASVYYVGPNGWK 688 KGTTT+ I + V++A D RAS+G ++ + KK+ +I+ Y+ T+AG D Q R L + +L+++ R I + LL+NIL+S R +I G+D G L+ +D GG + F + GSGSP AYGVL++GY DMS+ + A RD SG S+ + +G K Sbjct: 5 KGTTTVGLICDDAVILATDKRASLGNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRLLIAEAKLYKMRTGRNIPPLACATLLSNILHSSRMFPFLTQIIIGGYDLLEGAKLFSLDPLGGMNEEKTFTATGSGSPIAYGVLEAGYDRDMSVEEGIKLALNALKSAMERDTFSGNGISLAVITKDGVK 193
BLAST of CK936100 vs. ExPASy Swiss-Prot
Match: PSMB_PYRHO (Proteasome subunit beta OS=Pyrococcus horikoshii GN=psmB PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.366e-21 Identity = 65/193 (33.68%), Postives = 102/193 (52.85%), Query Frame = 2 Query: 128 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATPRDAASGGVASVYYVGPNGWKKLSGDD 706 KGTTT+ + K+GV++AAD RAS+G I +++V KI +I+ ++ AG D R L + +L+ + +R+SV + LLANI+ + ++ G+DE P LY VD GG + + GSG +AY +LDS YK ++++ I A RD SG V + G+K+LS + Sbjct: 9 KGTTTVGIVCKDGVVLAADRRASLGNIIYARNVTKIHKIDEHLAIAGAGDVGDILNLVRLLRAEAKLYYSQSGKRMSVKALATLLANIMNGAKYFPYLAWFLVGGYDEK-PKLYSVDMVGGITEDKYATAGSGMEFAYSILDSEYKDNLTLEEGIKLAVKAINTAIKRDVFSGDGILVVTITKEGYKELSDSE 200
BLAST of CK936100 vs. ExPASy Swiss-Prot
Match: PSMB_PYRAB (Proteasome subunit beta OS=Pyrococcus abyssi GN=psmB PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.366e-21 Identity = 64/190 (33.68%), Postives = 100/190 (52.63%), Query Frame = 2 Query: 128 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATPRDAASGGVASVYYVGPNGWKKLS 697 KGTTT+ + +GV++AAD RAS+G + +++V KI +I+ ++ AG D R L + +L+ + +R+SV + LLAN+L R + ++ G+DE P LY VD GG + + GSG +AY VLDS Y+ D+ + I A RD SG V + G+++LS Sbjct: 9 KGTTTVGIVCSDGVVLAADRRASLGNIVYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRLLRAEAKLYYAQSGKRMSVKALATLLANMLNGARMLPYLAWFLVGGFDEK-PRLYSVDMMGGITEDKYVAAGSGMEFAYSVLDSEYREDLKVREGIKIAVEAINSAIKRDVFSGDGIMVVTITEEGYRELS 197
BLAST of CK936100 vs. ExPASy Swiss-Prot
Match: PSMB_THEAC (Proteasome subunit beta OS=Thermoplasma acidophilum GN=psmB PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.663e-20 Identity = 57/177 (32.20%), Postives = 94/177 (53.11%), Query Frame = 2 Query: 131 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATPRDAASGGVASV 661 GTTT+ K+ V++A + R +M +I ++ KK+ +I+ Y T+AG D Q R + + L+ L + + + + LL+N+L + M V ++ G D T P ++ +D+ GG ++ S GSGSP+ YGVL+S Y M++ I A RD+ASGG+ V Sbjct: 8 GTTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRYMKAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGID-TAPHVFSIDAAGGSVEDIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQRDSASGGMIDV 183
BLAST of CK936100 vs. ExPASy Swiss-Prot
Match: PSMB_PYRFU (Proteasome subunit beta OS=Pyrococcus furiosus GN=psmB PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.933e-20 Identity = 64/191 (33.51%), Postives = 100/191 (52.36%), Query Frame = 2 Query: 128 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATPRDAASGGVASVYYVGPNGWKKLSG 700 KGTTT+ + KEGV++AAD+RAS+G I +++V KI +I+ ++ AG D R L + L++ + +SV + LLANIL + ++ G+DE P L+ VD GG + + GSG +AY +LDS Y+ +MS+ I A RD +G V + +G+K+ G Sbjct: 9 KGTTTVGLVCKEGVVLAADTRASLGNIIYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRLLKAEANLYKSTVGKEMSVKALATLLANILNGSKYFPYLGWFLVGGYDEK-PRLFSVDMVGGITEDNYAAAGSGMEFAYSILDSEYREEMSVNDGIKLAVKAINVAIKRDVFTGDGLLVVTITKDGYKEYRG 198
BLAST of CK936100 vs. ExPASy Swiss-Prot
Match: PB6LB_SALSA (Proteasome subunit beta type-6-B like protein OS=Salmo salar GN=psmb6l-b PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.749e-20 Identity = 66/187 (35.29%), Postives = 99/187 (52.94%), Query Frame = 2 Query: 131 GTTTLAFIFKEGVMVAADSRASMGG-YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATPRDAASGGVASVYYVGPNG 682 GTT LA F GV++ +DSRAS+GG Y+SS+++ K+I+++ + +AG AD Q + + H + + V A+ +L + Y+ + L G + AGWD + GP +Y V + GG L F++ GSGS Y YG D+ YK DMS + A RD SGGVA + + G Sbjct: 16 GTTILAVTFNGGVIIGSDSRASIGGSYVSSKTINKLIQVHDRIFCCIAGSLADAQAVTKAAKFQISFHSIQMESPPLVKAAASVLKELCYNNK-EELQAGFITAGWDRKKGPQVYTV-ALGGMLLSQPFTIGGSGSTYIYGYADAKYKPDMSKEECLQFATNALALAMGRDNVSGGVAHLVVITEEG 200
BLAST of CK936100 vs. ExPASy Swiss-Prot
Match: PB6LA_SALSA (Proteasome subunit beta type-6-A like protein OS=Salmo salar GN=psmb6l-a PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.749e-20 Identity = 66/187 (35.29%), Postives = 99/187 (52.94%), Query Frame = 2 Query: 131 GTTTLAFIFKEGVMVAADSRASMGG-YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATPRDAASGGVASVYYVGPNG 682 GTT LA F GV++ +DSRAS+GG Y+SS+++ K+I+++ + +AG AD Q + + H + + V A+ +L + Y+ + L G + AGWD + GP +Y V + GG L F++ GSGS Y YG D+ YK DMS + A RD SGGVA + + G Sbjct: 16 GTTILAVTFNGGVIIGSDSRASIGGSYVSSKTINKLIQVHDRIFCCIAGSLADAQAVTKAAKFQISFHSIQMESPPLVKAAASVLKELCYNNK-EELQAGFITAGWDRKKGPQVYTV-ALGGMLLSQPFTIGGSGSTYIYGYADAKYKPDMSKEECLQFAKNALALAMGRDNVSGGVAHLVVITEEG 200 The following BLAST results are available for this feature:
BLAST of CK936100 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >CK936100 ID=CK936100; Name=CK936100; organism=Citrus sinensis; type=EST; length=708bpback to top |