CK936100
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK936100 vs. ExPASy Swiss-Prot
Match: PSB9_ONCMY (Proteasome subunit beta type-9 OS=Oncorhynchus mykiss GN=psmb9 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.140e-17 Identity = 60/185 (32.43%), Postives = 93/185 (50.27%), Query Frame = 2 Query: 131 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATPRDAASGGVASVYYVGPNG 682 GTT +A F GV++ +DSR S G + ++ + K+ ++ + ++G AAD Q + + +H + V A+ L+ NI Y Y+ LS ++AGWD+ G G YV + G L F+V GSGS Y YG +D+ Y+ MS + A RD +SGGVA + + G Sbjct: 18 GTTIIAIEFDGGVVLGSDSRVSAGETVVNRVMNKLSLLHDKIYCALSGSAADAQTIAEMVNYQLDVHSIEVGEDPQVRSAATLVKNISYKYK-EDLSAHLIVAGWDKRGGGQVYV-TLNGLLSRQPFAVGGSGSSYVYGFVDAEYRKAMSKEDCQQFVVNTLSLAMSRDGSSGGVAYLVTIDEKG 200
BLAST of CK936100 vs. ExPASy Swiss-Prot
Match: PSMB_SULSO (Proteasome subunit beta OS=Sulfolobus solfataricus GN=psmB PE=3 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 8.019e-17 Identity = 59/192 (30.73%), Postives = 97/192 (50.52%), Query Frame = 2 Query: 119 KHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATPRDAASGGVASVYYVGPNGWKKL 694 K KGTTT+ +GV++AAD RAS G +++++ V+K++ I + T AG AD QF + L + + IS+ G + LAN+L + + V +I G+D+ P L+ +D G + + GSGSP A GVL+ Y M++ ++ A RD+ +G V + G ++L Sbjct: 10 KILKGTTTVGIRVNDGVILAADRRASAGFFVANKMVRKVLYITDKIGITTAGSVADLQFIYDVLKNIYHYNSITKYGPISIKGIATRLANVLSATKYFPYIVQILIGGYDDQ-PRLFNLDYLGDITEENYVATGSGSPVAMGVLEDEYNPKMTLDEAADLAKRAVFSAIKRDSFTGTGVIVAKIHSKGHEEL 200
BLAST of CK936100 vs. ExPASy Swiss-Prot
Match: PSB9_SALSA (Proteasome subunit beta type-9 OS=Salmo salar GN=psmb9-a PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.019e-17 Identity = 60/185 (32.43%), Postives = 93/185 (50.27%), Query Frame = 2 Query: 131 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATPRDAASGGVASVYYVGPNG 682 GTT +A F GV++ +DSR S G + ++ + K+ ++ + ++G AAD Q + + +H + V A+ L+ NI Y Y+ LS ++AGWD+ G G YV + G L F+V GSGS Y YG +D+ Y+ MS + A RD +SGGVA + + G Sbjct: 18 GTTIIAIEFDGGVVLGSDSRVSAGETVVNRVMNKLSLLHDKIYCALSGSAADAQTIAEMVNYQLDVHSIEVGEDPQVRSAATLVKNISYKYK-EELSAHLIVAGWDKRGGGQVYV-TLNGLLSRQPFAVGGSGSAYVYGFVDAEYRKAMSKEDCQQFVVNTLSLAMSRDGSSGGVAYLVTIDEKG 200
BLAST of CK936100 vs. ExPASy Swiss-Prot
Match: PSB9_BOVIN (Proteasome subunit beta type-9 OS=Bos taurus GN=PSMB9 PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.047e-16 Identity = 58/174 (33.33%), Postives = 84/174 (48.28%), Query Frame = 2 Query: 131 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATPRDAASGGV 652 GTT +A F GV+V +DSR S G + ++ K+ ++ ++ ++G AAD Q + LH + + V A+ ++ NI Y YR LS M+AGWD+ G Y G ++ GSGS Y YG +D+ YK MS I A RD +SGGV Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGEAVVNRVFDKLSPLHQHIYCALSGSAADAQAIADMAAYQLELHGMELEEPPLVLAAANVVRNITYKYRE-DLSAHLMVAGWDQREGGQVYGTMSGMLIRQPFAIGGSGSTYIYGYVDAAYKPGMSPEECRRFTTNAIALAMKRDGSSGGV 192
BLAST of CK936100 vs. ExPASy Swiss-Prot
Match: PSB6_ARATH (Proteasome subunit beta type-6 OS=Arabidopsis thaliana GN=PBA1 PE=1 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.368e-16 Identity = 55/195 (28.21%), Postives = 91/195 (46.67%), Query Frame = 2 Query: 101 DTKATLKHAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATPRDAASGGVASVYYVGPNG 682 D H+ GTT + + GV++ ADSR S G Y+++++ KI ++ + +G AAD Q + H + + + +V ++ L+ + Y+ + M L G ++ GWD+ G Y GG + F++ GSGS Y YG D +K +M+ + A RD ASGGV + G Sbjct: 2 DLNLDAPHSMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADSQVVSDYVRYFLHQHTIQHGQPATVKVSANLIRMLAYNNKNM-LQTGLIVGGWDKYEGGKIYGIPLGGTVVEQPFAIGGSGSSYLYGFFDQAWKDNMTKEEAEQLVVKAVSLAIARDGASGGVVRTVIINSEG 195
BLAST of CK936100 vs. ExPASy Swiss-Prot
Match: PSB6_MOUSE (Proteasome subunit beta type-6 OS=Mus musculus GN=Psmb6 PE=1 SV=3) HSP 1 Score: 86.2705 bits (212), Expect = 1.786e-16 Identity = 61/194 (31.44%), Postives = 93/194 (47.94%), Query Frame = 2 Query: 131 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATPRDAASGGVASVYYVGPNGWKK--LSGD 703 GTT +A F GV++ ADSR + G YI+++ K+ I+ ++ +G AAD Q + + H + V A+ L + Y YR L G +IAGWD G Y GG + F++ GSGS Y YG +D+ Y+ M+ + A RD +SGGV + + +G ++ L GD Sbjct: 33 GTTIMAVQFNGGVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCCRSGSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYR-EDLMAGIIIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKDECLQFTANALALAMERDGSSGGVIRLAAIQESGVERQVLLGD 225
BLAST of CK936100 vs. ExPASy Swiss-Prot
Match: PSB6_RAT (Proteasome subunit beta type-6 OS=Rattus norvegicus GN=Psmb6 PE=1 SV=3) HSP 1 Score: 85.8853 bits (211), Expect = 2.333e-16 Identity = 61/194 (31.44%), Postives = 93/194 (47.94%), Query Frame = 2 Query: 131 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATPRDAASGGVASVYYVGPNGWKK--LSGD 703 GTT +A F GV++ ADSR + G YI+++ K+ I+ ++ +G AAD Q + + H + V A+ L + Y YR L G +IAGWD G Y GG + F++ GSGS Y YG +D+ Y+ M+ + A RD +SGGV + + +G ++ L GD Sbjct: 33 GTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCCRSGSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYR-EDLMAGIIIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKDECLQFTANALALAMERDGSSGGVIRLAAIQQSGVERQVLLGD 225
BLAST of CK936100 vs. ExPASy Swiss-Prot
Match: PSB9_RAT (Proteasome subunit beta type-9 OS=Rattus norvegicus GN=Psmb9 PE=1 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 3.980e-16 Identity = 61/185 (32.97%), Postives = 90/185 (48.65%), Query Frame = 2 Query: 131 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATPRDAASGGVASVYYVGPNG 682 GTT +A F GV+V +DSR S G + ++ K+ ++ + ++G AAD Q + LH L + V A+ ++ NI Y YR L M+AGWD+ G Y + GG L F++ GSGS Y YG +D+ YK M+ I A RD +SGGV + + +G Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGAAVVNRVFDKLSPLHQRIYCALSGSAADAQAIADMAAYQLELHGLELEEPPLVLAAANIVKNISYKYR-EDLLAHLMVAGWDQHEGGQVY-GTMGGMLIRQPFAIGGSGSTYIYGYVDAAYKPGMTPEECRRFTTDAITLAMNRDGSSGGVIYLVTITADG 202
BLAST of CK936100 vs. ExPASy Swiss-Prot
Match: PSB6_HUMAN (Proteasome subunit beta type-6 OS=Homo sapiens GN=PSMB6 PE=1 SV=4) HSP 1 Score: 85.1149 bits (209), Expect = 3.980e-16 Identity = 61/194 (31.44%), Postives = 92/194 (47.42%), Query Frame = 2 Query: 131 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATPRDAASGGVASVYYVGPNGWKK--LSGD 703 GTT +A F GV++ ADSR + G YI+++ K+ I+ + +G AAD Q + + H + V A+ L + Y YR L G +IAGWD G Y GG + F++ GSGS Y YG +D+ Y+ M+ + A RD +SGGV + + +G ++ L GD Sbjct: 34 GTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYR-EDLMAGIIIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAAIAESGVERQVLLGD 226
BLAST of CK936100 vs. ExPASy Swiss-Prot
Match: PSB9_HUMAN (Proteasome subunit beta type-9 OS=Homo sapiens GN=PSMB9 PE=1 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 6.788e-16 Identity = 59/175 (33.71%), Postives = 87/175 (49.71%), Query Frame = 2 Query: 131 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATPRDAASGGV 652 GTT +A F GV++ +DSR S G + ++ K+ ++ + ++G AAD Q + LH + + V A+ ++ NI Y YR LS M+AGWD+ G Y + GG L F++ GSGS + YG +D+ YK MS I A RD +SGGV Sbjct: 20 GTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHERIYCALSGSAADAQAVADMAAYQLELHGIELEEPPLVLAAANVVRNISYKYR-EDLSAHLMVAGWDQREGGQVY-GTLGGMLTRQPFAIGGSGSTFIYGYVDAAYKPGMSPEECRRFTTDAIALAMSRDGSSGGV 192 The following BLAST results are available for this feature:
BLAST of CK936100 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >CK936100 ID=CK936100; Name=CK936100; organism=Citrus sinensis; type=EST; length=708bpback to top |