EY756597

Overview
NameEY756597
Unique NameEY756597
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length908
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8643 contig Csv1_Contig8643:6..914. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756597 vs. ExPASy Swiss-Prot
Match: NFU1_DROPS (NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Drosophila pseudoobscura pseudoobscura GN=GA22888 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.356e-12
Identity = 43/107 (40.19%), Postives = 63/107 (58.88%), Query Frame = 1
Query:  436 TAENIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNE-ENIEKVLEEIRP--YLVGAAGG 744
            T   I+ +LD  IRP +  DGG++     +  VV+LK+QG+C SCPSS++T+K G++  L   IPE+ +VE V D+   +   E E  EK L++  P    VG  GG
Sbjct:  178 TVMMIKELLDTRIRPTVQEDGGDIVFISYENGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPEVESVEQVFDDVDRMADKEFERFEKNLKQKEPAGAPVGIGGG 284          
BLAST of EY756597 vs. ExPASy Swiss-Prot
Match: NFU1_DROWI (NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Drosophila willistoni GN=GK25604 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.077e-12
Identity = 39/94 (41.49%), Postives = 58/94 (61.70%), Query Frame = 1
Query:  436 TAENIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNE-ENIEKVLEE 711
            T   I+ +LD  IRP +  DGG++     D  VV+LK+QG+C SCPSS++T+K G++  L   IPE+ +VE V DE   +   E E  E+ L++
Sbjct:  179 TVMMIKELLDTRIRPTVQEDGGDIVFMSYDNGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPEVESVEQVFDEADKMADKEFERFERNLKQ 272          
BLAST of EY756597 vs. ExPASy Swiss-Prot
Match: NFU1_DROSI (NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Drosophila simulans GN=GD15490 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.077e-12
Identity = 41/105 (39.05%), Postives = 64/105 (60.95%), Query Frame = 1
Query:  436 TAENIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADE-ETGLELNEENIEKVLEEIRPYLVGAAGG 744
            T   I+ +LD  IRP +  DGG++     +  VV+LK+QG+C SCPSS++T+K G++  L   IPE+ +VE V DE +  ++   E  EK L+ ++    G +GG
Sbjct:  178 TVMMIKELLDTRIRPTVQEDGGDIVFMGYEAGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPEVESVEQVFDEADRMIDSEFERFEKNLKTLKQQ--GPSGG 280          
BLAST of EY756597 vs. ExPASy Swiss-Prot
Match: NFU1_DROER (NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Drosophila erecta GN=GG17526 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.077e-12
Identity = 40/104 (38.46%), Postives = 62/104 (59.62%), Query Frame = 1
Query:  436 TAENIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADE-ETGLELNEENIEKVLEEIRPYLVGAAG 741
            T   I+ +LD  IRP +  DGG++     +  VV+LK+QG+C SCPSS++T+K G++  L   IPE+ +VE V DE +  ++   E  EK L+ ++      AG
Sbjct:  178 TVMMIKELLDTRIRPTVQEDGGDIVFMGYEAGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPEVESVEQVFDEADRMIDSEFERFEKNLKTLKQQEPSGAG 281          
BLAST of EY756597 vs. ExPASy Swiss-Prot
Match: NFU1_DROYA (NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Drosophila yakuba GN=GE15286 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.249e-12
Identity = 39/96 (40.62%), Postives = 60/96 (62.50%), Query Frame = 1
Query:  436 TAENIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNE-ENIEKVLEEIR 717
            T   I+ +LD  IRP +  DGG++     +  VV+LK+QG+C SCPSS++T+K G++  L   IPE+ +VE V DE   +  +E E  EK L+ ++
Sbjct:  178 TVMMIKELLDTRIRPTVQEDGGDIVFMGYEAGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPEVESVEQVFDEADRMVDSEFERFEKNLKTLK 273          
BLAST of EY756597 vs. ExPASy Swiss-Prot
Match: NFU1_DROSE (NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Drosophila sechellia GN=GM13534 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.855e-12
Identity = 38/96 (39.58%), Postives = 60/96 (62.50%), Query Frame = 1
Query:  436 TAENIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADE-ETGLELNEENIEKVLEEIR 717
            T   I+ +LD  IRP +  DGG++     +  VV+LK+QG+C SCPSS++T+K G++  L   IPE+ +VE V DE +  ++   E  EK L+ ++
Sbjct:  178 TVMMIKELLDTRIRPTVQEDGGDIVFMGYEAGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPEVESVEQVFDEADRMIDSEFERFEKNLKTLK 273          
BLAST of EY756597 vs. ExPASy Swiss-Prot
Match: NFU1_DROGR (NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Drosophila grimshawi GN=GH17809 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.855e-12
Identity = 39/94 (41.49%), Postives = 59/94 (62.77%), Query Frame = 1
Query:  436 TAENIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNE-ENIEKVLEE 711
            T   I+ +LD  IRP +  DGG++     +  VV+LK+QG+C SCPSS++T+K G++  L   IPE+ +VE V DE   +  +E E  EK L++
Sbjct:  190 TVMMIKELLDTRIRPTVQEDGGDIVFISYEKGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPEVESVEQVFDEVDKVANSEFERFEKSLKQ 283          
BLAST of EY756597 vs. ExPASy Swiss-Prot
Match: NFU1_MOUSE (NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Mus musculus GN=Nfu1 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.169e-11
Identity = 35/73 (47.95%), Postives = 49/73 (67.12%), Query Frame = 1
Query:  448 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEE 663
            I+ +LD  IRP +  DGG+V     +  +VRLKLQG+C SCPSS++T+K GI+  L   IPE+  VE V D++
Sbjct:  173 IKELLDTRIRPTVQEDGGDVIYRGFEDGIVRLKLQGSCTSCPSSIITLKSGIQNMLQFYIPEVEGVEQVMDDD 245          
BLAST of EY756597 vs. ExPASy Swiss-Prot
Match: NFU1_HUMAN (NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Homo sapiens GN=NFU1 PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.994e-11
Identity = 35/74 (47.30%), Postives = 50/74 (67.57%), Query Frame = 1
Query:  448 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEET 666
            I+ +LD  IRP +  DGG+V     +  +V+LKLQG+C SCPSS++T+K GI+  L   IPE+  VE V D+E+
Sbjct:  173 IKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYIPEVEGVEQVMDDES 246          
BLAST of EY756597 vs. ExPASy Swiss-Prot
Match: NFU1_DROVI (NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Drosophila virilis GN=GJ19011 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.605e-11
Identity = 37/92 (40.22%), Postives = 56/92 (60.87%), Query Frame = 1
Query:  436 TAENIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNE-ENIEKVL 705
            T   I+ +LD  IRP +  DGG++     +  +V+LK+QG+C SCPSS++T+K G++  L   IPE+ +VE V D+   +   E E  EK L
Sbjct:  186 TVMMIKELLDTRIRPTVQEDGGDIVFMGYENGIVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPEVESVEQVFDDADKMANKEFERFEKSL 277          
The following BLAST results are available for this feature:
BLAST of EY756597 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
NFU1_DROPS2.356e-1240.19NFU1 iron-sulfur cluster scaffold homolog, mitocho... [more]
NFU1_DROWI3.077e-1241.49NFU1 iron-sulfur cluster scaffold homolog, mitocho... [more]
NFU1_DROSI3.077e-1239.05NFU1 iron-sulfur cluster scaffold homolog, mitocho... [more]
NFU1_DROER3.077e-1238.46NFU1 iron-sulfur cluster scaffold homolog, mitocho... [more]
NFU1_DROYA5.249e-1240.63NFU1 iron-sulfur cluster scaffold homolog, mitocho... [more]
NFU1_DROSE6.855e-1239.58NFU1 iron-sulfur cluster scaffold homolog, mitocho... [more]
NFU1_DROGR6.855e-1241.49NFU1 iron-sulfur cluster scaffold homolog, mitocho... [more]
NFU1_MOUSE1.169e-1147.95NFU1 iron-sulfur cluster scaffold homolog, mitocho... [more]
NFU1_HUMAN1.994e-1147.30NFU1 iron-sulfur cluster scaffold homolog, mitocho... [more]
NFU1_DROVI2.605e-1140.22NFU1 iron-sulfur cluster scaffold homolog, mitocho... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-010-D08-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756597 ID=EY756597; Name=EY756597; organism=Citrus sinensis; type=EST; length=908bp
CCACGCGTCCGAAAAAAAATTTCAAAAAAAGACTGCGCCAACCGCCCGCG
ACCACGCGTAACGAAAGCAAAATAATTCAGCAACACAGATCGATTCAATT
AATCGTTAAACCATCAATTTTTATCAAATCGAATCCCCTGAAAGGAAAAA
AAAAAAAAAGTATACACCCGAAGAAATACAAAGAGAAAGATGCAAGGCGT
TGTGTTGAACCCATCTTACAGTCGCCCTCACCAAACCCTAGACCCTCCTT
CTTGTTCGCGTCCTGCCTCTAAGAGTACTAAAAGTTTCTTTGGAGAACGA
GTTTCGCTTACGAGGTGGCGGAATCCGGTGTGTCACAGCTCGTGTCGGTT
ACTGCTGATTCGGAAGCGTGGGGCCGCGCGAAGGAACGTCATAAAGGCTG
TGGCTACTCCTGATTCAGCTATTGAGTTACCTTTAACTGCTGAGAATATT
GAAAGTGTATTGGATGAAATTCGACCATATCTTATATCAGATGGGGGAAA
TGTGGCATTACATGAGATTGATGGCAATGTTGTACGATTGAAGCTACAGG
GAGCATGTGGGTCTTGCCCCAGTTCTGTTATGACGATGAAGATGGGTATT
GAGCGTCGCTTAATGGAGAAGATCCCCGAGATAGTTGCAGTGGAATCGGT
AGCAGATGAAGAAACTGGGCTTGAGCTGAATGAAGAAAATATAGAGAAGG
TACTTGAGGAAATCAGGCCCTATCTTGTTGGGGCAGCAGGTGGATCACTT
GAACTTGTGACAATTGATGAGCCAATAGTTAAAAGTCGNATTACGGGTCC
GGCAGCTGGAGTCATGACTGTTCGTGTGGCTGGTACCCAAAAGTTGCGTG
AAAAATCCCAGNCATTGCAGCAGGTCAACTTCTGTAATGTCAAGCAGCTG
GGTCATGA
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