EY756605

Overview
NameEY756605
Unique NameEY756605
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length326
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756605 vs. ExPASy Swiss-Prot
Match: PPWD1_BOVIN (Peptidylprolyl isomerase domain and WD repeat-containing protein 1 OS=Bos taurus GN=PPWD1 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.894e-18
Identity = 46/87 (52.87%), Postives = 58/87 (66.67%), Query Frame = 1
Query:   22 GNGTGGESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKP 279
            G G GGESI+G +F DE +   +H  P  LSMANAG  TNGSQFF+    T WLD KH VFG+V +GM+VV+ I  V   + +T+KP
Sbjct:  547 GTGMGGESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISNV-KVNPKTDKP 632          
BLAST of EY756605 vs. ExPASy Swiss-Prot
Match: CYP9_CAEBR (Peptidyl-prolyl cis-trans isomerase 9 OS=Caenorhabditis briggsae GN=cyn-9 PE=2 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 4.894e-18
Identity = 42/78 (53.85%), Postives = 55/78 (70.51%), Query Frame = 1
Query:   16 TAGNGTGGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKV 249
            T G+G GG SIYG  F DE FV KH+ P +LSMAN GP +N SQFF+ TA     +GKHVVFG+V++G +VV  ++ +
Sbjct:   78 TDGDGRGGFSIYGRYFDDEKFVLKHSKPYLLSMANKGPNSNSSQFFITTAPAPHCNGKHVVFGEVIKGREVVDVLDNL 155          
BLAST of EY756605 vs. ExPASy Swiss-Prot
Match: PPIL1_CRYNE (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Cryptococcus neoformans GN=CYP1 PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.090e-17
Identity = 44/88 (50.00%), Postives = 60/88 (68.18%), Query Frame = 1
Query:   22 GNGTGGESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPV 282
            G G GG SIYG +FADE   + +  G GIL+MAN+GP TNGSQFF+  A T +LDGKH +FG+V  GM  ++ +E V   + + ++PV
Sbjct:   64 GTGRGGTSIYGDRFADEIHPELRFVGAGILAMANSGPNTNGSQFFITCAPTPYLDGKHTIFGRVSSGMKTIQRLEAV--RTDKDDRPV 149          
BLAST of EY756605 vs. ExPASy Swiss-Prot
Match: PPWD1_MOUSE (Peptidylprolyl isomerase domain and WD repeat-containing protein 1 OS=Mus musculus GN=Ppwd1 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.429e-17
Identity = 46/87 (52.87%), Postives = 58/87 (66.67%), Query Frame = 1
Query:   22 GNGTGGESIYGSKFADE-NFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKP 279
            G G GGESI+G +F DE +   +H  P  LSMANAG  TNGSQFF+    T WLD KH VFG+V +GM+VV+ I  V   + +T+KP
Sbjct:  549 GTGMGGESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVSKGMEVVQRIFNV-KVNPQTDKP 634          
BLAST of EY756605 vs. ExPASy Swiss-Prot
Match: PPIL6_BOVIN (Peptidyl-prolyl cis-trans isomerase-like 6 OS=Bos taurus GN=PPIL6 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.172e-17
Identity = 44/96 (45.83%), Postives = 57/96 (59.38%), Query Frame = 1
Query:   19 AGNGTGGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 306
            AG G  GESIYG  F DENF   H   G+L M N G  +NGSQF++      +LD K+V FGQ++EG DV+  +E V + + R  +  VI   GQL
Sbjct:  210 AGKGDNGESIYGPTFEDENFSVPHNKRGVLGMVNKGRHSNGSQFYITLQAAPYLDKKYVAFGQLIEGTDVLHHLESVPTENERPIQNCVITASGQL 305          
BLAST of EY756605 vs. ExPASy Swiss-Prot
Match: CYP9_SCHPO (Peptidyl-prolyl cis-trans isomerase 9 OS=Schizosaccharomyces pombe GN=cyp9 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 9.230e-17
Identity = 45/86 (52.33%), Postives = 55/86 (63.95%), Query Frame = 1
Query:   22 GNGTGGESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNK 276
            G+GTGGESI+   F DE     KH  P  +SMAN+GP TNGSQFF+ T  T WLDGKH +F +   G+DVV  IE+     G T+K
Sbjct:  512 GDGTGGESIWKKDFEDEISPNLKHDRPFTVSMANSGPNTNGSQFFITTDLTPWLDGKHTIFARAYAGLDVVHRIEQ-----GETDK 592          
BLAST of EY756605 vs. ExPASy Swiss-Prot
Match: PPIL2_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Mus musculus GN=Ppil2 PE=2 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 1.206e-16
Identity = 44/87 (50.57%), Postives = 56/87 (64.37%), Query Frame = 1
Query:   22 GNGTGGESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKP 279
            G GTGGES +G  F DE      HTG G+LSMAN+GP TN SQFF+      +LD KH +FG+VV G D + A+E V  S  +T++P
Sbjct:  337 GTGTGGESFWGKPFKDEFRPNLSHTGRGVLSMANSGPNTNKSQFFITFRSCAYLDKKHTIFGRVVGGFDTLTAMENV-ESDPKTDRP 422          
BLAST of EY756605 vs. ExPASy Swiss-Prot
Match: PPIL2_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Homo sapiens GN=PPIL2 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.206e-16
Identity = 45/87 (51.72%), Postives = 57/87 (65.52%), Query Frame = 1
Query:   22 GNGTGGESIYGSKFADENFVK-KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKP 279
            G GTGGES +G  F DE      HTG GILSMAN+GP +N SQFF+      +LD KH +FG+VV G DV+ A+E V  S  +T++P
Sbjct:  337 GTGTGGESYWGKPFKDEFRPNLSHTGRGILSMANSGPNSNRSQFFITFRSCAYLDKKHTIFGRVVGGFDVLTAMENV-ESDPKTDRP 422          
BLAST of EY756605 vs. ExPASy Swiss-Prot
Match: PPIL6_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 6 OS=Homo sapiens GN=PPIL6 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.056e-16
Identity = 43/93 (46.24%), Postives = 55/93 (59.14%), Query Frame = 1
Query:   22 GNGTGGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCG 300
            G G  GESIYG  F DENF   H   G+L MAN G  +NGSQF++    T +LD K V FGQ++EG +V+K +E V + + R      I D G
Sbjct:  215 GKGDNGESIYGPTFEDENFSVPHNKRGVLGMANKGRHSNGSQFYITLQATPYLDRKFVAFGQLIEGTEVLKQLELVPTQNERPIHMCRITDSG 307          
BLAST of EY756605 vs. ExPASy Swiss-Prot
Match: PPIL2_SCHPO (Peptidyl-prolyl cis-trans isomerase cyp8 OS=Schizosaccharomyces pombe GN=cyp8 PE=2 SV=3)

HSP 1 Score: 82.0333 bits (201), Expect = 1.021e-15
Identity = 45/95 (47.37%), Postives = 61/95 (64.21%), Query Frame = 1
Query:   19 AGNGTGGESIYGSKFADENFVK--KHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNK-PVVIAD 294
            +G G GG+SI+G  F DE F    KH   GI+SMAN G  TNGSQFF+     + LD KH +FG+VV G++V+ A+EKV ++S    K P+ + D
Sbjct:  332 SGTGRGGQSIWGKPFKDE-FCNPLKHDDRGIISMANRGKNTNGSQFFILYGPAKHLDNKHTIFGRVVGGLNVLDALEKVPTNSNDHPKLPIKLED 425          
The following BLAST results are available for this feature:
BLAST of EY756605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 211
Match NameE-valueIdentityDescription
PPWD1_BOVIN4.894e-1852.87Peptidylprolyl isomerase domain and WD repeat-cont... [more]
CYP9_CAEBR4.894e-1853.85Peptidyl-prolyl cis-trans isomerase 9 OS=Caenorhab... [more]
PPIL1_CRYNE1.090e-1750.00Peptidyl-prolyl cis-trans isomerase-like 1 OS=Cryp... [more]
PPWD1_MOUSE2.429e-1752.87Peptidylprolyl isomerase domain and WD repeat-cont... [more]
PPIL6_BOVIN3.172e-1745.83Peptidyl-prolyl cis-trans isomerase-like 6 OS=Bos ... [more]
CYP9_SCHPO9.230e-1752.33Peptidyl-prolyl cis-trans isomerase 9 OS=Schizosac... [more]
PPIL2_MOUSE1.206e-1650.57Peptidyl-prolyl cis-trans isomerase-like 2 OS=Mus ... [more]
PPIL2_HUMAN1.206e-1651.72Peptidyl-prolyl cis-trans isomerase-like 2 OS=Homo... [more]
PPIL6_HUMAN2.056e-1646.24Peptidyl-prolyl cis-trans isomerase-like 6 OS=Homo... [more]
PPIL2_SCHPO1.021e-1547.37Peptidyl-prolyl cis-trans isomerase cyp8 OS=Schizo... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-010-E06-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756605 ID=EY756605; Name=EY756605; organism=Citrus sinensis; type=EST; length=326bp
CCACGCGTCCGCTTCACCGCCGGAAACGGAACCGGAGGCGAATCAATCTA
CGGCTCGAAATTCGCCGATGAGAACTTCGTGAAGAAGCACACCGGCCCCG
GAATCCTCTCCATGGCGAATGCCGGACCCGGAACCAACGGATCTCAGTTC
TTCGTCTGTACGGCCAAGACCGAGTGGCTCGATGGGAAGCACGTTGTGTT
CGGTCAGGTCGTCGAAGGGATGGACGTCGTCAAGGCCATCGAGAAAGTGG
GGTCCAGCTCCGGCAGGACCAACAAGCCCGTCGTGATCGCTGATTGCGGT
CAATTGTCTTAGATTTGATCATGATA
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