FE896219
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FE896219 vs. ExPASy Swiss-Prot
Match: CB2_DUNSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 9.082e-46 Identity = 96/136 (70.59%), Postives = 109/136 (80.15%), Query Frame = -1 Query: 3 VWFXXWXSRFSQEGXLXXLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLENPVANNAWVYATKF 407 +WF + F Q+G L LGNP+L+HAQ+I+A L QVVLMGLVEG+R+NG P GEG D LYPG + FDPLGLADDP TFAELKVKEIKNGRLAMF+ GFFVQAIVTGKGP+ENL DHL NP NNA+ YATKF Sbjct: 138 IWFKAGAAIF-QDGGLNYLGNPSLIHAQNIVATLAVQVVLMGLVEGYRVNGGPA-GEGLDPLYPG-EAFDPLGLADDPDTFAELKVKEIKNGRLAMFACLGFFVQAIVTGKGPIENLTDHLANPAENNAFAYATKF 270
BLAST of FE896219 vs. ExPASy Swiss-Prot
Match: CB21_SOYBN (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Glycine max PE=2 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 9.082e-46 Identity = 102/147 (69.39%), Postives = 109/147 (74.15%), Query Frame = -1 Query: 3 RNGFRVDFKEPVWFXXWXSRFSQEGXLXXLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLENPVANNAWVYATKF 440 RNG V F E WF FS EG L LGN +L+HAQSILA+ QV+LMG VEG+RI G P +GE D +YPGG FDPL LADDP FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL DHL PV NNAW YAT F Sbjct: 100 RNG--VKFGEASWFKAGSQIFS-EGGLDYLGNQSLIHAQSILAIWATQVILMGAVEGYRIAGGP-LGEVTDPIYPGGS-FDPLALADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAEPVNNNAWAYATNF 241
BLAST of FE896219 vs. ExPASy Swiss-Prot
Match: CB21_PEA (Chlorophyll a-b binding protein AB96 (Fragment) OS=Pisum sativum GN=AB96 PE=1 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 1.549e-45 Identity = 103/147 (70.07%), Postives = 111/147 (75.51%), Query Frame = -1 Query: 3 RNGFRVDFKEPVWFXXWXSRFSQEGXLXXLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLENPVANNAWVYATKF 440 RNG V F E VWF FS EG L LGNP+LVHAQSILA+ QV+LMG VEG+RI G P +GE D LYPGG FDPLGLA+ P FAELKVKE+KNGRLAMFSMFGFFV AIVTGKGPLENL DHL +PV NNAW YAT F Sbjct: 83 RNG--VKFGEAVWFKAGSQIFS-EGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGP-LGEVVDPLYPGGS-FDPLGLAEVPEAFAELKVKELKNGRLAMFSMFGFFVPAIVTGKGPLENLADHLADPVNNNAWSYATNF 224
BLAST of FE896219 vs. ExPASy Swiss-Prot
Match: CB23_APIGR (Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens GN=LHC0 PE=1 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 2.023e-45 Identity = 101/147 (68.71%), Postives = 112/147 (76.19%), Query Frame = -1 Query: 3 RNGFRVDFKEPVWFXXWXSRFSQEGXLXXLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLENPVANNAWVYATKF 440 RNG V F E VWF FS EG L LGNP+LVHAQSIL++ QV+LMG VEG+R+ G P +GE D LYPGG FDPLGLA+DP AELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENL DHL +PV NNAW +AT F Sbjct: 119 RNG--VKFGEAVWFKAGSQIFS-EGGLDYLGNPSLVHAQSILSIWATQVILMGAVEGYRVAGGP-LGEIVDPLYPGGS-FDPLGLAEDPERSAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNF 260
BLAST of FE896219 vs. ExPASy Swiss-Prot
Match: CB48_MAIZE (Chlorophyll a-b binding protein 48, chloroplastic OS=Zea mays GN=CAB48 PE=3 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 6.508e-44 Identity = 101/147 (68.71%), Postives = 108/147 (73.47%), Query Frame = -1 Query: 3 RNGFRVDFKEPVWFXXWXSRFSQEGXLXXLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLENPVANNAWVYATKF 440 RNG V F E VWF FS EG L GNP+LVHAQSILA+ QVVLMG VEG+ + G +GE D LY GG FDPLGL DDP FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENL DHL +PV NNAW YAT F Sbjct: 119 RNG--VKFGEGVWFKAGSQIFS-EGGLSHPGNPSLVHAQSILAIWACQVVLMGAVEGYHVAG-GRLGEVVDPLYLGGS-FDPLGLGDDPERFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLTDPVNNNAWAYATNF 260
BLAST of FE896219 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 8.500e-44 Identity = 100/147 (68.03%), Postives = 111/147 (75.51%), Query Frame = -1 Query: 3 RNGFRVDFKEPVWFXXWXSRFSQEGXLXXLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLENPVANNAWVYATKF 440 RNG V F E WF FS +G L LGNP+LVHAQS+LA+ QVVLMG VEG+RI G P +GE D LYPGG FDPLGLA+ P FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE+L DH+ +PV NNAW+ AT F Sbjct: 121 RNG--VKFGEAGWFKAGSQIFS-DGGLDYLGNPSLVHAQSLLAIWACQVVLMGAVEGYRIAGGP-LGEIVDPLYPGGS-FDPLGLAERPQAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEDLADHIADPVNNNAWLIATNF 262
BLAST of FE896219 vs. ExPASy Swiss-Prot
Match: CB21_RAPSA (Chlorophyll a-b binding of LHCII type 1 protein (Fragment) OS=Raphanus sativus PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 1.772e-41 Identity = 87/121 (71.90%), Postives = 95/121 (78.51%), Query Frame = -1 Query: 3 LXXLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNDL-YPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLENPVANNAWVYATKF 362 L LGNP+LVHAQSILA+ QV+LMG VEG+R+ G +GE DL YPGG FDPL DP FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL DHL +PV NNAW +AT F Sbjct: 1 LDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDGPLGEAEDLLYPGGS-FDPLASLTDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNF 120
BLAST of FE896219 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 2.315e-41 Identity = 91/143 (63.64%), Postives = 104/143 (72.73%), Query Frame = -1 Query: 3 VDFKEPVWFXXWXSRFSQEGXLXXLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPG--VGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLENPVANNAWVYATKF 425 V F EPVWF F+ +G L LGN +L+HAQSI+A L QVVLMGL E +R NG + + + LYPGG FDPLGLADDP TFAELKVKEIKNGRLAMFS GFFVQAIVTGKGP++NL DHL +P N A+ ATKF Sbjct: 109 VQFGEPVWFKAGAQIFA-DGGLNYLGNESLIHAQSIIATLAVQVVLMGLAEAYRANGGSEGFLDDLDTLYPGGP-FDPLGLADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKGPVQNLTDHLADPTVNKAFASATKF 249
BLAST of FE896219 vs. ExPASy Swiss-Prot
Match: CB2D_SOLLC (Chlorophyll a-b binding protein 1D (Fragment) OS=Solanum lycopersicum GN=CAB1D PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 1.500e-40 Identity = 89/114 (78.07%), Postives = 95/114 (83.33%), Query Frame = -1 Query: 3 NLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLENPVANNAWVYATKF 341 +LVHAQSILA+ QVVLMG VEG+RI G P +GE D LYPGG FDPLGLA+DP FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL DHL +PV NNAW YAT F Sbjct: 1 SLVHAQSILAIWACQVVLMGAVEGYRIAGGP-LGEVVDPLYPGGS-FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNF 112
BLAST of FE896219 vs. ExPASy Swiss-Prot
Match: CB2C_SOLLC (Chlorophyll a-b binding protein 1C, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB1C PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 2.559e-40 Identity = 88/114 (77.19%), Postives = 95/114 (83.33%), Query Frame = -1 Query: 3 NLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLENPVANNAWVYATKF 341 +LVHAQSILA+ QVVLMG VEG+RI G P +GE D LYPGG FDPLGLA+DP FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL DHL +PV NNAW +AT F Sbjct: 150 SLVHAQSILAIWACQVVLMGAVEGYRIAGGP-LGEVVDPLYPGGS-FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNF 261 The following BLAST results are available for this feature:
BLAST of FE896219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >FE896219 ID=FE896219; Name=FE896219; organism=Citrus trifoliata; type=EST; length=455bpback to top |