FE896219
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FE896219 vs. ExPASy Swiss-Prot
Match: CB4A_ARATH (Chlorophyll a-b binding protein CP29.1, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.1 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.577e-16 Identity = 45/96 (46.88%), Postives = 63/96 (65.62%), Query Frame = -1 Query: 36 SILAVLGFQVVLMGLVEGFRINGLPGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLENPV 323 SI ++ +V+++G +E F+ N + LYPGG++FDPLGLA DP A+L++ EIK+ RLAM + GF VQA TGKGPL N HL +P+ Sbjct: 187 SISTLIWIEVLVIGYIE-FQRNA--ELDSEKRLYPGGKFFDPLGLAADPEKTAQLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPL 279
BLAST of FE896219 vs. ExPASy Swiss-Prot
Match: CB121_HORVU (Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 3.150e-14 Identity = 41/67 (61.19%), Postives = 46/67 (68.66%), Query Frame = -1 Query: 27 YPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLLDHLENPVANN 224 YPGG FDPLG + DP F ELK+KEIKNGRLAM + GF V Q+ G GPLENL HL +P NN Sbjct: 167 YPGGA-FDPLGFSKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 232
BLAST of FE896219 vs. ExPASy Swiss-Prot
Match: CB11_SOLLC (Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 3.150e-14 Identity = 41/67 (61.19%), Postives = 47/67 (70.15%), Query Frame = -1 Query: 27 YPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLLDHLENPVANN 224 YPGG FDPLG + DP F ELKVKEIKNGRLA+ ++ GF V Q+ G GPLENL HL +P NN Sbjct: 168 YPGGA-FDPLGYSKDPAKFEELKVKEIKNGRLALLAIVGFCVQQSAYLGTGPLENLATHLADPWHNN 233
BLAST of FE896219 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.324e-12 Identity = 39/78 (50.00%), Postives = 47/78 (60.26%), Query Frame = -1 Query: 39 FRINGLPGVGEGNDLYPGGQYFDPLGLAD-DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLENP 269 F N L G G YPGG +FDPLG P EL+ KEIKNGRLAM ++ G + Q I TG GP++NL HL +P Sbjct: 184 FPNNKLTGTDVG---YPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 258
BLAST of FE896219 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.324e-12 Identity = 39/78 (50.00%), Postives = 47/78 (60.26%), Query Frame = -1 Query: 39 FRINGLPGVGEGNDLYPGGQYFDPLGLAD-DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLENP 269 F N L G G YPGG +FDPLG P EL+ KEIKNGRLAM ++ G + Q I TG GP++NL HL +P Sbjct: 184 FPNNKLTGTDVG---YPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 258 The following BLAST results are available for this feature:
BLAST of FE896219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >FE896219 ID=FE896219; Name=FE896219; organism=Citrus trifoliata; type=EST; length=455bpback to top |