FE896220
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FE896220 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 3.435e-24 Identity = 59/136 (43.38%), Postives = 74/136 (54.41%), Query Frame = 2 Query: 20 RYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMT-------NVHPVMN---------------QGFGATIQKINGAVECGGKQPAQVQARIEYYKDYCNKFGVDPGPNLSC 361 R+PC PGK Y+ RGP+Q+ N NYGAAG+AIG D L PE VA DP V+FKTALW WMT + H V+ G+G T + G ++C G R+ +YK YC+ GV GPNL C Sbjct: 190 RWPCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQCAGGNGG--ADRVAFYKRYCDVLGVGYGPNLDC 323
BLAST of FE896220 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 9.995e-24 Identity = 58/129 (44.96%), Postives = 70/129 (54.26%), Query Frame = 2 Query: 38 GKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMT------NVHPVM---------------NQGFGATIQKINGAVECGGKQPAQVQARIEYYKDYCNKFGVDPGPNLSC 361 G +YGRGPIQLTG NY AG+AIG D + P+ VA D VSFKTA+WFWMT + H V+ G+G ING +ECG Q QV+ RI +Y+ YC V PG NL C Sbjct: 110 GSGFYGRGPIQLTGQSNYDLAGQAIGQDLVNNPDLVATDATVSFKTAIWFWMTAQGNKPSCHDVITGQWTPSAADASANRQPGYGVITNIINGGIECGKGQNPQVEDRIGFYRRYCTILNVAPGDNLDC 238
BLAST of FE896220 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 9.995e-24 Identity = 59/135 (43.70%), Postives = 71/135 (52.59%), Query Frame = 2 Query: 20 RYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHPVMN---------------------QGFGATIQKINGAVECGGKQPAQVQARIEYYKDYCNKFGVDPGPNLSC 361 ++PC GK YYGRGPIQL+ N NYG AG+AIG D L P+ VA D VSF TA WFWMT P + G+G ING +ECG + +V RI +YK YC+ GV NL C Sbjct: 184 QWPCAAGKKYYGRGPIQLSYNFNYGPAGQAIGADLLGDPDLVASDATVSFDTAFWFWMTPQSPKPSCHAVATGQWTPSADDQAAGRVPGYGVITNIINGGLECGHGEDDRVADRIGFYKRYCDILGVSYDANLDC 318
BLAST of FE896220 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.885e-22 Identity = 59/131 (45.04%), Postives = 70/131 (53.44%), Query Frame = 2 Query: 38 GKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMT------NVHPVMN---------------QGFGATIQKINGAVECGGKQPAQVQARIEYYKDYCNKFGVDPGPNLSC*N 367 G YYGRGPIQLTG NY AGKAI D + P+ VA D VSFKTA+WFWMT + H V+ G+G ING +ECG Q A+V+ RI YY+ + V PG NL C N Sbjct: 117 GNGYYGRGPIQLTGQSNYDLAGKAIEQDLVNNPDLVATDATVSFKTAIWFWMTPQGNKPSCHDVITGRWTPSAADTSANRVPGYGVITNIINGGIECGKGQNARVEDRIGYYRRNVSIMNVAPGDNLDCYN 247
BLAST of FE896220 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.885e-22 Identity = 60/129 (46.51%), Postives = 71/129 (55.04%), Query Frame = 2 Query: 47 YYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMT------NVHPVM---------------NQGFGATIQKINGAVECG-GKQPAQVQARIEYYKDYCNKFGVDPGPNLSC*N 367 YYGRGPIQLTG NY AAG A+G D + P+ V+ D VVSFKTA+WFWMT + H V+ G+G ING +ECG G+ A V RI YYK YC+ G G NL C N Sbjct: 128 YYGRGPIQLTGQSNYQAAGNALGLDLVGNPDLVSTDAVVSFKTAIWFWMTAQGNKPSCHDVILGRWTPSAADTAAGRVPGYGVITNIINGGIECGVGQNDANVD-RIGYYKRYCDMLGAGYGSNLDCYN 255
BLAST of FE896220 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 1.596e-21 Identity = 57/135 (42.22%), Postives = 69/135 (51.11%), Query Frame = 2 Query: 23 YPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWM------TNVHPVMN---------------QGFGATIQKINGAVECG-GKQPAQVQARIEYYKDYCNKFGVDPGPNLSC 361 Y CV GK Y GRGPIQL+ N NYG G + L+ PE V DPV+SFKTA+WFWM + H V+ G+G ING +ECG G A + RI +YK YC+ G G NL C Sbjct: 189 YQCVAGKQYCGRGPIQLSWNYNYGLCGDDLKLPLLQEPELVETDPVISFKTAIWFWMKPQSPKPSCHAVITGNWTPSAADLEAGRVPGYGVITNIINGGIECGQGGPNAANEDRIGFYKKYCDSLGTTYGSNLDC 323
BLAST of FE896220 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 3.555e-21 Identity = 55/128 (42.97%), Postives = 67/128 (52.34%), Query Frame = 2 Query: 47 YYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMT------NVHPVM---------------NQGFGATIQKINGAVECGGKQPAQVQARIEYYKDYCNKFGVDPGPNLSC*N 367 YYGRGPIQLT NY AG AIG + + P+ VA D +SFKTA+WFWMT + H V+ G+G ING +ECG + V+ RI YY+ YC V PG NL C N Sbjct: 119 YYGRGPIQLTNRNNYEKAGTAIGQELVNNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGRWTPSAADQAANRVPGYGVITNIINGGIECGIGRNDAVEDRIGYYRRYCGMLNVAPGENLDCYN 246
BLAST of FE896220 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 6.063e-21 Identity = 56/128 (43.75%), Postives = 65/128 (50.78%), Query Frame = 2 Query: 47 YYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMT------NVHPVM---------------NQGFGATIQKINGAVECGGKQPAQVQARIEYYKDYCNKFGVDPGPNLSC*N 367 YYGRGPIQLT NY AG AI D + P+ VA D +SFKTA+WFWMT + H V+ G G ING +ECG A V+ RI YY+ YC V PG NL C N Sbjct: 119 YYGRGPIQLTNQNNYEKAGNAIRQDLVNNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGSWTPSAADQSANRAPGCGVITNIINGGIECGVGPNAAVEDRIGYYRRYCGMLNVAPGDNLDCYN 246
BLAST of FE896220 vs. ExPASy Swiss-Prot
Match: CHI11_ORYSJ (Chitinase 11 OS=Oryza sativa subsp. japonica GN=Cht11 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 7.919e-21 Identity = 54/127 (42.52%), Postives = 68/127 (53.54%), Query Frame = 2 Query: 47 YYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHP-------VMNQ--------------GFGATIQKINGAVECG-GKQPAQVQARIEYYKDYCNKFGVDPGPNLSC 361 YYGRGPIQLT NY AG A+G D + P+ V+ DPVV+F+TA+WFWMT P + NQ G+G ING ECG G + R+ YYK YC+ F V G N++C Sbjct: 121 YYGRGPIQLTHKYNYQLAGDALGLDLVNNPDLVSSDPVVAFRTAIWFWMTAQSPKPSCHDVITNQWTPSGDDRSSGRLPGYGMATNIINGGEECGKGYSTDNAKDRVGYYKRYCDMFRVGYGDNIAC 247
BLAST of FE896220 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 3.009e-20 Identity = 60/146 (41.10%), Postives = 70/146 (47.95%), Query Frame = 2 Query: 23 YPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMT-------NVHPVM---------------NQGFGATIQKINGAVECGGKQPAQVQARIEYYKDYCNKFGVDPGPNLSC*N--VFADTSL 388 YPCV YYGRGP+QL N NYG G +G + L PE VA DPV+SF+ ALWFWM + H V+ GFG I EC + Q RI+YY YC+ VDPG NL C N F D L Sbjct: 166 YPCVAD--YYGRGPLQLRWNYNYGECGNYLGQNLLDEPEKVATDPVLSFEAALWFWMNPHSTGAPSCHEVITGEWSPSEADIEAGRKPGFGMLTNIITNGGECTKDGKTRQQNRIDYYLRYCDMLQVDPGDNLYCDNQETFEDNGL 309 The following BLAST results are available for this feature:
BLAST of FE896220 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FE896220 ID=FE896220; Name=FE896220; organism=Citrus trifoliata; type=EST; length=396bpback to top |