GE213229
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GE213229 vs. ExPASy Swiss-Prot
Match: NDK_NATPD (Nucleoside diphosphate kinase OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=ndk PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.729e-12 Identity = 34/73 (46.58%), Postives = 44/73 (60.27%), Query Frame = 1 Query: 232 MEQVEETYIMVKPDGVQRGLVGDIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYLPGRPL 450 M E T++MVKPDGVQRGL+GDI+SRFE Q +LA EHY + KPFF +L E++ P+ Sbjct: 1 MADTERTFVMVKPDGVQRGLIGDIVSRFEDRGLKLVAGKFMQIDDELAREHYAEHVDKPFFDELKEFITSGPV 73
BLAST of GE213229 vs. ExPASy Swiss-Prot
Match: NDKB_FLABI (Nucleoside diphosphate kinase B OS=Flaveria bidentis PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.729e-12 Identity = 34/70 (48.57%), Postives = 45/70 (64.29%), Query Frame = 1 Query: 241 VEETYIMVKPDGVQRGLVGDIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYLPGRPL 450 +E T+IM+KPDGVQRGLVG+II RFE + AE+HY DL++KPFF L+EY+ P+ Sbjct: 1 MEHTFIMIKPDGVQRGLVGEIIGRFEKKGFSLKGLKLLTVDQAFAEKHYADLSAKPFFNGLVEYIISGPV 70
BLAST of GE213229 vs. ExPASy Swiss-Prot
Match: NDKA_RAT (Nucleoside diphosphate kinase A OS=Rattus norvegicus GN=Nme1 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.729e-12 Identity = 34/73 (46.58%), Postives = 44/73 (60.27%), Query Frame = 1 Query: 232 MEQVEETYIMVKPDGVQRGLVGDIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYLPGRPL 450 M E T+I +KPDGVQRGLVG+II RFE Q +DL +EHY DL +PFF L++Y+ P+ Sbjct: 1 MANSERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVGLKFIQASEDLLKEHYIDLKDRPFFSGLVKYMHSGPV 73
BLAST of GE213229 vs. ExPASy Swiss-Prot
Match: NDK_UNCMA (Nucleoside diphosphate kinase OS=Uncultured methanogenic archaeon RC-I GN=ndk PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 2.258e-12 Identity = 33/72 (45.83%), Postives = 47/72 (65.28%), Query Frame = 1 Query: 232 MEQVEETYIMVKPDGVQRGLVGDIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYLPGRP 447 M + E T++MVKPDGVQRGLVG+IISRFE + ++LA++HY + +KPFFP L+ ++ P Sbjct: 1 MVERERTFVMVKPDGVQRGLVGEIISRFERRGLKIVGMKMLEVSEELAKQHYAEHAAKPFFPGLVSFIRSGP 72
BLAST of GE213229 vs. ExPASy Swiss-Prot
Match: NDKM_HUMAN (Nucleoside diphosphate kinase, mitochondrial OS=Homo sapiens GN=NME4 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 2.258e-12 Identity = 33/69 (47.83%), Postives = 41/69 (59.42%), Query Frame = 1 Query: 244 EETYIMVKPDGVQRGLVGDIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYLPGRPL 450 E T + VKPDGVQR LVGD+I RFE Q P+ + EHY+DL KPF+P LI Y+ P+ Sbjct: 38 ERTLVAVKPDGVQRRLVGDVIQRFERRGFTLVGMKMLQAPESVLAEHYQDLRRKPFYPALIRYMSSGPV 106
BLAST of GE213229 vs. ExPASy Swiss-Prot
Match: NDK1_ARATH (Nucleoside diphosphate kinase 1 OS=Arabidopsis thaliana GN=NDPK1 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 2.258e-12 Identity = 31/70 (44.29%), Postives = 46/70 (65.71%), Query Frame = 1 Query: 241 VEETYIMVKPDGVQRGLVGDIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYLPGRPL 450 +E+T+IM+KPDGVQRGL+G++I RFE + AE+HY+DL+SK FF L++Y+ P+ Sbjct: 1 MEQTFIMIKPDGVQRGLIGEVICRFEKKGFTLKGLKLISVERSFAEKHYEDLSSKSFFSGLVDYIVSGPV 70
BLAST of GE213229 vs. ExPASy Swiss-Prot
Match: NDK_HALLT (Nucleoside diphosphate kinase OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=ndk PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.949e-12 Identity = 31/69 (44.93%), Postives = 44/69 (63.77%), Query Frame = 1 Query: 244 EETYIMVKPDGVQRGLVGDIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYLPGRPL 450 E T++MVKPDGVQRGL+G+I+SRFE Q +DLA +HY + KPFF L++++ P+ Sbjct: 6 ERTFVMVKPDGVQRGLIGEIVSRFEERGLKLVGGKFMQIDEDLAHQHYGEHEGKPFFDGLVDFITSAPV 74
BLAST of GE213229 vs. ExPASy Swiss-Prot
Match: NDK_PELTS (Nucleoside diphosphate kinase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=ndk PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.851e-12 Identity = 32/70 (45.71%), Postives = 45/70 (64.29%), Query Frame = 1 Query: 241 VEETYIMVKPDGVQRGLVGDIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYLPGRPL 450 +E TY+M+KPDGVQRGLVG+II+RFE + ++LAE+HY + KPFF L+ Y+ P+ Sbjct: 1 MERTYLMIKPDGVQRGLVGEIIARFEKRGFKIVGLKMIRIGRELAEKHYGEHKGKPFFEPLVGYITSSPV 70
BLAST of GE213229 vs. ExPASy Swiss-Prot
Match: NDK_HELMI (Nucleoside diphosphate kinase OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=ndk PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.851e-12 Identity = 32/70 (45.71%), Postives = 46/70 (65.71%), Query Frame = 1 Query: 241 VEETYIMVKPDGVQRGLVGDIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYLPGRPL 450 +E TY+M+KPDGVQRGLVG+IISRFE + +++AE+HY + KPFF L++Y+ P+ Sbjct: 1 MERTYLMIKPDGVQRGLVGEIISRFEKKGFKLVGMKFLRLTREMAEKHYAEHVGKPFFAGLVDYIISGPV 70
BLAST of GE213229 vs. ExPASy Swiss-Prot
Match: NDK_CARHZ (Nucleoside diphosphate kinase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=ndk PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.851e-12 Identity = 34/70 (48.57%), Postives = 44/70 (62.86%), Query Frame = 1 Query: 241 VEETYIMVKPDGVQRGLVGDIISRFEXXXXXXXXXXXXQCPKDLAEEHYKDLNSKPFFPKLIEYLPGRPL 450 +E T+IMVKPDGVQRGLVG+IISRFE Q ++LAE HY + KPFF L+ ++ P+ Sbjct: 1 MERTFIMVKPDGVQRGLVGEIISRFEKRGFKLVGLKLMQISRELAETHYGEHKGKPFFEGLLNFITSGPV 70 The following BLAST results are available for this feature:
BLAST of GE213229 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 90
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Sequences
The
following sequences are available for this feature:
EST sequence >GE213229 ID=GE213229; Name=GE213229; organism=Citrus sinensis; type=EST; length=454bpback to top |