EY739384

Overview
NameEY739384
Unique NameEY739384
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length870
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9798 contig Csv1_Contig9798:1..850. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY739384 vs. ExPASy Swiss-Prot
Match: PPIA_PONPY (Peptidyl-prolyl cis-trans isomerase A OS=Pongo pygmaeus GN=PPIA PE=2 SV=4)

HSP 1 Score: 169.474 bits (428), Expect = 2.260e-41
Identity = 83/145 (57.24%), Postives = 99/145 (68.28%), Query Frame = 1 
Query:  367 VTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVXMANAGPNTNGSQFFICTVKTPWLNQRHVVFGPILEGMDIVNRTE 801
            V   V+FD+++    G+  GR+   L+ D VP+TAENFRAL TGEKGFGYKGS FHR+I  FM Q             SIYG  F+DENF L H GPG++ MANAGPNTNGSQFFICT KT WL+ +HVVFG + EGM+IV   E
Sbjct:    2 VNPTVFFDIAVD---GEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAME 143
[Close]
BLAST of EY739384 vs. ExPASy Swiss-Prot
Match: PPIA_PAPAN (Peptidyl-prolyl cis-trans isomerase A OS=Papio anubis GN=PPIA PE=2 SV=2)

HSP 1 Score: 169.474 bits (428), Expect = 2.260e-41
Identity = 83/145 (57.24%), Postives = 99/145 (68.28%), Query Frame = 1 
Query:  367 VTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVXMANAGPNTNGSQFFICTVKTPWLNQRHVVFGPILEGMDIVNRTE 801
            V   V+FD+++    G+  GR+   L+ D VP+TAENFRAL TGEKGFGYKGS FHR+I  FM Q             SIYG  F+DENF L H GPG++ MANAGPNTNGSQFFICT KT WL+ +HVVFG + EGM+IV   E
Sbjct:    2 VNPTVFFDIAVD---GEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAME 143
[Close]
BLAST of EY739384 vs. ExPASy Swiss-Prot
Match: PPIA_PANTR (Peptidyl-prolyl cis-trans isomerase A OS=Pan troglodytes GN=PPIA PE=3 SV=3)

HSP 1 Score: 169.474 bits (428), Expect = 2.260e-41
Identity = 83/145 (57.24%), Postives = 99/145 (68.28%), Query Frame = 1 
Query:  367 VTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVXMANAGPNTNGSQFFICTVKTPWLNQRHVVFGPILEGMDIVNRTE 801
            V   V+FD+++    G+  GR+   L+ D VP+TAENFRAL TGEKGFGYKGS FHR+I  FM Q             SIYG  F+DENF L H GPG++ MANAGPNTNGSQFFICT KT WL+ +HVVFG + EGM+IV   E
Sbjct:    2 VNPTVFFDIAVD---GEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAME 143
[Close]
BLAST of EY739384 vs. ExPASy Swiss-Prot
Match: PPIA_PANPA (Peptidyl-prolyl cis-trans isomerase A OS=Pan paniscus GN=PPIA PE=3 SV=3)

HSP 1 Score: 169.474 bits (428), Expect = 2.260e-41
Identity = 83/145 (57.24%), Postives = 99/145 (68.28%), Query Frame = 1 
Query:  367 VTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVXMANAGPNTNGSQFFICTVKTPWLNQRHVVFGPILEGMDIVNRTE 801
            V   V+FD+++    G+  GR+   L+ D VP+TAENFRAL TGEKGFGYKGS FHR+I  FM Q             SIYG  F+DENF L H GPG++ MANAGPNTNGSQFFICT KT WL+ +HVVFG + EGM+IV   E
Sbjct:    2 VNPTVFFDIAVD---GEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAME 143
[Close]
BLAST of EY739384 vs. ExPASy Swiss-Prot
Match: PPIA_MACMU (Peptidyl-prolyl cis-trans isomerase A OS=Macaca mulatta GN=PPIA PE=1 SV=2)

HSP 1 Score: 169.474 bits (428), Expect = 2.260e-41
Identity = 83/145 (57.24%), Postives = 99/145 (68.28%), Query Frame = 1 
Query:  367 VTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVXMANAGPNTNGSQFFICTVKTPWLNQRHVVFGPILEGMDIVNRTE 801
            V   V+FD+++    G+  GR+   L+ D VP+TAENFRAL TGEKGFGYKGS FHR+I  FM Q             SIYG  F+DENF L H GPG++ MANAGPNTNGSQFFICT KT WL+ +HVVFG + EGM+IV   E
Sbjct:    2 VNPTVFFDIAVD---GEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAME 143
[Close]
BLAST of EY739384 vs. ExPASy Swiss-Prot
Match: PPIA_HYLSY (Peptidyl-prolyl cis-trans isomerase A OS=Hylobates syndactylus GN=PPIA PE=3 SV=3)

HSP 1 Score: 169.474 bits (428), Expect = 2.260e-41
Identity = 83/145 (57.24%), Postives = 99/145 (68.28%), Query Frame = 1 
Query:  367 VTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVXMANAGPNTNGSQFFICTVKTPWLNQRHVVFGPILEGMDIVNRTE 801
            V   V+FD+++    G+  GR+   L+ D VP+TAENFRAL TGEKGFGYKGS FHR+I  FM Q             SIYG  F+DENF L H GPG++ MANAGPNTNGSQFFICT KT WL+ +HVVFG + EGM+IV   E
Sbjct:    2 VNPTVFFDIAVD---GEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAME 143
[Close]
BLAST of EY739384 vs. ExPASy Swiss-Prot
Match: PPIA_HYLLE (Peptidyl-prolyl cis-trans isomerase A OS=Hylobates leucogenys GN=PPIA PE=3 SV=3)

HSP 1 Score: 169.474 bits (428), Expect = 2.260e-41
Identity = 83/145 (57.24%), Postives = 99/145 (68.28%), Query Frame = 1 
Query:  367 VTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVXMANAGPNTNGSQFFICTVKTPWLNQRHVVFGPILEGMDIVNRTE 801
            V   V+FD+++    G+  GR+   L+ D VP+TAENFRAL TGEKGFGYKGS FHR+I  FM Q             SIYG  F+DENF L H GPG++ MANAGPNTNGSQFFICT KT WL+ +HVVFG + EGM+IV   E
Sbjct:    2 VNPTVFFDIAVD---GEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAME 143
[Close]
BLAST of EY739384 vs. ExPASy Swiss-Prot
Match: PPIA_HYLLA (Peptidyl-prolyl cis-trans isomerase A OS=Hylobates lar GN=PPIA PE=3 SV=3)

HSP 1 Score: 169.474 bits (428), Expect = 2.260e-41
Identity = 83/145 (57.24%), Postives = 99/145 (68.28%), Query Frame = 1 
Query:  367 VTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVXMANAGPNTNGSQFFICTVKTPWLNQRHVVFGPILEGMDIVNRTE 801
            V   V+FD+++    G+  GR+   L+ D VP+TAENFRAL TGEKGFGYKGS FHR+I  FM Q             SIYG  F+DENF L H GPG++ MANAGPNTNGSQFFICT KT WL+ +HVVFG + EGM+IV   E
Sbjct:    2 VNPTVFFDIAVD---GEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAME 143
[Close]
BLAST of EY739384 vs. ExPASy Swiss-Prot
Match: PPIA_HUMAN (Peptidyl-prolyl cis-trans isomerase A OS=Homo sapiens GN=PPIA PE=1 SV=2)

HSP 1 Score: 169.474 bits (428), Expect = 2.260e-41
Identity = 83/145 (57.24%), Postives = 99/145 (68.28%), Query Frame = 1 
Query:  367 VTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVXMANAGPNTNGSQFFICTVKTPWLNQRHVVFGPILEGMDIVNRTE 801
            V   V+FD+++    G+  GR+   L+ D VP+TAENFRAL TGEKGFGYKGS FHR+I  FM Q             SIYG  F+DENF L H GPG++ MANAGPNTNGSQFFICT KT WL+ +HVVFG + EGM+IV   E
Sbjct:    2 VNPTVFFDIAVD---GEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAME 143
[Close]
BLAST of EY739384 vs. ExPASy Swiss-Prot
Match: PPIA_GORGO (Peptidyl-prolyl cis-trans isomerase A OS=Gorilla gorilla gorilla GN=PPIA PE=3 SV=3)

HSP 1 Score: 169.474 bits (428), Expect = 2.260e-41
Identity = 83/145 (57.24%), Postives = 99/145 (68.28%), Query Frame = 1 
Query:  367 VTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVXMANAGPNTNGSQFFICTVKTPWLNQRHVVFGPILEGMDIVNRTE 801
            V   V+FD+++    G+  GR+   L+ D VP+TAENFRAL TGEKGFGYKGS FHR+I  FM Q             SIYG  F+DENF L H GPG++ MANAGPNTNGSQFFICT KT WL+ +HVVFG + EGM+IV   E
Sbjct:    2 VNPTVFFDIAVD---GEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAME 143
The following BLAST results are available for this feature:
BLAST of EY739384 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 229
Match NameE-valueIdentityDescription
PPIA_PONPY2.260e-4157.24Peptidyl-prolyl cis-trans isomerase A OS=Pongo pyg... [more]
PPIA_PAPAN2.260e-4157.24Peptidyl-prolyl cis-trans isomerase A OS=Papio anu... [more]
PPIA_PANTR2.260e-4157.24Peptidyl-prolyl cis-trans isomerase A OS=Pan trogl... [more]
PPIA_PANPA2.260e-4157.24Peptidyl-prolyl cis-trans isomerase A OS=Pan panis... [more]
PPIA_MACMU2.260e-4157.24Peptidyl-prolyl cis-trans isomerase A OS=Macaca mu... [more]
PPIA_HYLSY2.260e-4157.24Peptidyl-prolyl cis-trans isomerase A OS=Hylobates... [more]
PPIA_HYLLE2.260e-4157.24Peptidyl-prolyl cis-trans isomerase A OS=Hylobates... [more]
PPIA_HYLLA2.260e-4157.24Peptidyl-prolyl cis-trans isomerase A OS=Hylobates... [more]
PPIA_HUMAN2.260e-4157.24Peptidyl-prolyl cis-trans isomerase A OS=Homo sapi... [more]
PPIA_GORGO2.260e-4157.24Peptidyl-prolyl cis-trans isomerase A OS=Gorilla g... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-705-056-F09-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY739384 ID=EY739384; Name=EY739384; organism=Citrus sinensis; type=EST; length=870bp
CACGCGTCCGCTTCTTAGCTCTTATCTATCGGTAGTAACAATCTTTTATC
TGAATCTCTCCACACACCGACTCTGAGGCACTTGTCCATTCCATCAATGG
CGGCAGCGGCTTCATTCGCAGCCCAAATAAATGTAAGCTGGGTCTCAGGC
CCACTTCAACTGAACAAAGCTCTCAGTCCCTCGCGTAATGCAATCGAGAT
ACCCAGAAAATCTTCTTCATTCCTATCAAATGCTTCATCATCCTGCTCCA
GCTTCTTCTCCCGTCCGTTGACTCCCGTTCCCCCTCTCACTCATTTTCCC
ACCAGGAAAATGGGTACGCGTAGCCTTGTTCGGGCCAGTGCTGAGGTATC
TGATTTACAATCGAAAGTTACCAATAAAGTTTATTTCGATGTGAGCATTG
GGAATCCAGTAGGAAAGCTTGCTGGAAGAATCGTGATTGGATTGTACGGT
GATGATGTGCCCCAAACGGCAGAGAACTTCCGTGCTTTATGCACAGGAGA
GAAGGGCTTTGGTTACAAAGGTTCCACATTCCATCGTGTTATCAAAGATT
TCATGATCCAAGGAGGAGACTTTGATAAAGGCAATGGAACTGGAGGTAAA
AGTATATACGGCCGTACATTCAAAGATGAGAACTTCAAATTGTCGCATAT
TGGACCAGGAGTAGTTANTATGGCAAATGCAGGTCCCAACACTAATGGCA
GCCAATTTTTCATTTGTACGGTCAAGACCCCATGGCTAAATCAGAGGCAT
GTTGTCTTTGGGCCAATTTTGGAGGGCATGGACATTGTAAACCGTACTGA
GTCACCGGAAACTGAGAGGGGCCACGGCCTGCAAAGAAGGTGGTCCTAAT
AAATGCGGGCGACTCCCATG
back to top