EY739384

Overview
NameEY739384
Unique NameEY739384
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length870
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9798 contig Csv1_Contig9798:1..850. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY739384 vs. ExPASy Swiss-Prot
Match: PPIE_HUMAN (Peptidyl-prolyl cis-trans isomerase E OS=Homo sapiens GN=PPIE PE=1 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.619e-39
Identity = 81/154 (52.60%), Postives = 103/154 (66.88%), Query Frame = 1
Query:  376 KVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVXMANAGPNTNGSQFFICTVKTPWLNQRHVVFGPILEGMDIVNRTESPETERGHGLQR 837
            +VY D+ IGN   K AGRI + L  D VP TAENFR LCT EKGFG+KGS+FHR+I  FM Q             SIYG+ F DENF L H GPG++ MAN+GPNTNGSQFF+   KT WL+ +HVVFG + EG+D++ + E+  ++ G   Q+
Sbjct:  141 QVYMDIKIGN---KPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEAQGSKDGKPKQK 291          
BLAST of EY739384 vs. ExPASy Swiss-Prot
Match: CYP6_CAEEL (Peptidyl-prolyl cis-trans isomerase 6 OS=Caenorhabditis elegans GN=cyn-6 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.619e-39
Identity = 85/155 (54.84%), Postives = 106/155 (68.39%), Query Frame = 1
Query:  364 KVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVXMANAGPNTNGSQFFICTVKTPWLNQRHVVFGPILEGMDIVNRTESPETERGHG 828
            +VT+KV+FD+ IG   G+  G+IVIGL+G+ VP+T +NF  L    +G GY GS FHRVI++FMIQ             SIYG  F+DENFKL H GPG + MANAG +TNGSQFFI T KT WL+ +HVVFG ILEGMD+V   E+  T +G G
Sbjct:   23 RVTDKVFFDMEIG---GRPVGKIVIGLFGEVVPKTVKNFVELAQRAEGEGYVGSKFHRVIENFMIQGGDFTRGDGTGGRSIYGERFEDENFKLQHYGPGWLSMANAGEDTNGSQFFITTAKTSWLDGKHVVFGKILEGMDVVREIEA--TPKGAG 172          
BLAST of EY739384 vs. ExPASy Swiss-Prot
Match: PPIE_PONAB (Peptidyl-prolyl cis-trans isomerase E OS=Pongo abelii GN=PPIE PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.115e-39
Identity = 81/154 (52.60%), Postives = 103/154 (66.88%), Query Frame = 1
Query:  376 KVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVXMANAGPNTNGSQFFICTVKTPWLNQRHVVFGPILEGMDIVNRTESPETERGHGLQR 837
            +VY D+ IGN   K AGRI + L  D VP TAENFR LCT EKGFG+KGS+FHR+I  FM Q             SIYG+ F DENF L H GPG++ MAN+GPNTNGSQFF+   KT WL+ +HVVFG + EG+D++ + E+  ++ G   Q+
Sbjct:  141 QVYMDIKIGN---KPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEARGSKDGKPKQK 291          
BLAST of EY739384 vs. ExPASy Swiss-Prot
Match: PPID_DICDI (Peptidyl-prolyl cis-trans isomerase D, mitochondrial OS=Dictyostelium discoideum GN=cypD PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.115e-39
Identity = 87/158 (55.06%), Postives = 103/158 (65.19%), Query Frame = 1
Query:  367 VTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFG-------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVXMANAGPNTNGSQFFICTVKTPWLNQRHVVFGPILEGMDIVNRTESPETER 819
            + NKV+F +  GN      GR+V  LY D VP+TAENFRALCTGEKG G       YKGS+FHRVIK+FM+Q             SIYGRTF DENF + H   G + MANAG NTNGSQFFI T +TP LN  H VFG ++EG DIV + E+ ET+R
Sbjct:    5 IRNKVFFQIKQGNTP---LGRVVFELYNDIVPKTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIKNFMVQGGDFTHGTGIGGESIYGRTFNDENFLVKH-KIGCLSMANAGKNTNGSQFFITTAETPHLNGGHTVFGEVVEGFDIVKKVENAETDR 158          
BLAST of EY739384 vs. ExPASy Swiss-Prot
Match: PPIB_SCHMA (Peptidyl-prolyl cis-trans isomerase B OS=Schistosoma mansoni GN=CYP PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.115e-39
Identity = 85/156 (54.49%), Postives = 104/156 (66.67%), Query Frame = 1
Query:  364 KVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGE-----KGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVXMANAGPNTNGSQFFICTVKTPWLNQRHVVFGPILEGMDIVNRTESPETE 816
            KVT+KV+FD+ +    GK   RI+IGL+G  VP+T ENF+ L  G      +   YKGSTFHRVIK FMIQ             SIYG  F DENFKL H+G G + MANAGP+TNGSQFFI TVKT WL+ +HVVFG ++EGM+IV + ES  T+
Sbjct:   29 KVTDKVFFDIEVD---GKPLARIIIGLFGKTVPKTVENFKQLSIGTQLKDGRTASYKGSTFHRVIKSFMIQGGDFTNHDGTGGFSIYGDRFPDENFKLRHVGAGWLSMANAGPDTNGSQFFITTVKTSWLDGKHVVFGKVVEGMNIVRQIESETTD 181          
BLAST of EY739384 vs. ExPASy Swiss-Prot
Match: PPIE_BOVIN (Peptidyl-prolyl cis-trans isomerase E OS=Bos taurus GN=PPIE PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.762e-39
Identity = 81/154 (52.60%), Postives = 103/154 (66.88%), Query Frame = 1
Query:  376 KVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVXMANAGPNTNGSQFFICTVKTPWLNQRHVVFGPILEGMDIVNRTESPETERGHGLQR 837
            +VY D+ IGN   K AGRI + L  D VP TAENFR LCT EKGFG+KGS+FHR+I  FM Q             SIYG+ F DENF L H GPG++ MAN+GPNTNGSQFF+   KT WL+ +HVVFG I +G+D++ + E+  ++ G   Q+
Sbjct:  141 QVYMDIKIGN---KPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEITDGLDVLRQIEAQGSKDGKPKQK 291          
BLAST of EY739384 vs. ExPASy Swiss-Prot
Match: PPID_GIBZE (Peptidyl-prolyl cis-trans isomerase D OS=Gibberella zeae GN=CPR6 PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.050e-38
Identity = 85/156 (54.49%), Postives = 101/156 (64.74%), Query Frame = 1
Query:  376 KVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFG-------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVXMANAGPNTNGSQFFICTVKTPWLNQRHVVFGPILEGMDIVNRTESPETERG 822
            +VYFD+SIG   GK  GRI + LY D VP+TA+NFR+LCTGEKG G       YKGS FHRVIK FMIQ             SIYG  F DE F + H  P ++ MANAGPNTNGSQFFI TV TP L+ +HVVFG +L G  +V + E+  T+ G
Sbjct:   12 RVYFDISIG---GKSVGRITMELYADLVPKTADNFRSLCTGEKGIGKSGKPLHYKGSVFHRVIKQFMIQGGDFTAGDGTGGESIYGNKFDDEAFPIKHEKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGEVLNGKSVVRQIENLTTQSG 164          
BLAST of EY739384 vs. ExPASy Swiss-Prot
Match: PPI2_SYNY3 (Peptidyl-prolyl cis-trans isomerase slr1251 OS=Synechocystis sp. (strain PCC 6803) GN=slr1251 PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.371e-38
Identity = 82/161 (50.93%), Postives = 107/161 (66.46%), Query Frame = 1
Query:  373 NKVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFG-------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVXMANAGPNTNGSQFFICTVKTPWLNQRHVVFGPILEGMDIVNRTESPETERGHGLQ 834
            +KV+FD++IG+     AGRIV+ L+ +  P+TAENFRALCTGEKG G       +KGS FHRVI DFM Q             SIYG  F DENF+L H  PG++ MANAGPNTNGSQFF+  V  PWL+ +HVVFG ++EG++I+ + E+  ++ G   Q
Sbjct:    3 SKVFFDITIGSDT---AGRIVMELFDEVTPKTAENFRALCTGEKGVGKAGKPLHFKGSHFHRVITDFMAQGGDFTRGNGTGGESIYGEKFADENFQLKHDRPGLLSMANAGPNTNGSQFFLTFVPCPWLDGKHVVFGEVVEGLEILEQLEANGSQSGQTKQ 160          
BLAST of EY739384 vs. ExPASy Swiss-Prot
Match: PPIB_SCHJA (Peptidyl-prolyl cis-trans isomerase B OS=Schistosoma japonicum PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.790e-38
Identity = 80/156 (51.28%), Postives = 102/156 (65.38%), Query Frame = 1
Query:  364 KVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGE-----KGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVXMANAGPNTNGSQFFICTVKTPWLNQRHVVFGPILEGMDIVNRTESPETE 816
            KVT KV+FD+ +     +  GRI+IGL+G  VP+T ENF+ L  G      +   YKGSTFHRVIK FMIQ             SIYG  F DENFKL H+G G + MANAGPNTNG+QFFI T + PWL+ +HVVFG ++EGM +V + E+ +T+
Sbjct:   29 KVTEKVFFDIEVDE---QPLGRIIIGLFGKTVPKTVENFKQLSIGTTLKDGRTAAYKGSTFHRVIKSFMIQGGDFTNHDGTGGFSIYGERFPDENFKLKHVGAGWLSMANAGPNTNGAQFFITTTQNPWLDGKHVVFGKVVEGMSVVRQIENMQTD 181          
BLAST of EY739384 vs. ExPASy Swiss-Prot
Match: CYPX_USEUD (Peptidyl-prolyl cis-trans isomerase OS=Unspecified eudicot DB-1992 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.790e-38
Identity = 84/154 (54.55%), Postives = 105/154 (68.18%), Query Frame = 1
Query:  382 YFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFG-------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVXMANAGPNTNGSQFFICTVKTPWLNQRHVVFGPILEGMDIVNRTESPETERG 822
            +FD++IG   G+ AGRI++ L+  DVP+TAENFRALCTGEKG G       Y+GS FHRVI  FM+Q             SIYG  F DENF   H  PG++ MANAGP TNGSQFFI TV TP L+ +HVVFG ++EGMD+V + E+ +T+RG
Sbjct:    5 FFDMTIG---GQPAGRIIMELF-PDVPKTAENFRALCTGEKGIGPSGKKMTYEGSVFHRVIPKFMLQGGDFTLGNGRGGESIYGAKFADENFIHKHTTPGLLSMANAGPGTNGSQFFITTVATPHLDGKHVVFGKVVEGMDVVRKIEATQTDRG 154          
The following BLAST results are available for this feature:
BLAST of EY739384 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 229
Match NameE-valueIdentityDescription
PPIE_HUMAN1.619e-3952.60Peptidyl-prolyl cis-trans isomerase E OS=Homo sapi... [more]
CYP6_CAEEL1.619e-3954.84Peptidyl-prolyl cis-trans isomerase 6 OS=Caenorhab... [more]
PPIE_PONAB2.115e-3952.60Peptidyl-prolyl cis-trans isomerase E OS=Pongo abe... [more]
PPID_DICDI2.115e-3955.06Peptidyl-prolyl cis-trans isomerase D, mitochondri... [more]
PPIB_SCHMA2.115e-3954.49Peptidyl-prolyl cis-trans isomerase B OS=Schistoso... [more]
PPIE_BOVIN2.762e-3952.60Peptidyl-prolyl cis-trans isomerase E OS=Bos tauru... [more]
PPID_GIBZE1.050e-3854.49Peptidyl-prolyl cis-trans isomerase D OS=Gibberell... [more]
PPI2_SYNY31.371e-3850.93Peptidyl-prolyl cis-trans isomerase slr1251 OS=Syn... [more]
PPIB_SCHJA1.790e-3851.28Peptidyl-prolyl cis-trans isomerase B OS=Schistoso... [more]
CYPX_USEUD1.790e-3854.55Peptidyl-prolyl cis-trans isomerase OS=Unspecified... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-056-F09-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY739384 ID=EY739384; Name=EY739384; organism=Citrus sinensis; type=EST; length=870bp
CACGCGTCCGCTTCTTAGCTCTTATCTATCGGTAGTAACAATCTTTTATC
TGAATCTCTCCACACACCGACTCTGAGGCACTTGTCCATTCCATCAATGG
CGGCAGCGGCTTCATTCGCAGCCCAAATAAATGTAAGCTGGGTCTCAGGC
CCACTTCAACTGAACAAAGCTCTCAGTCCCTCGCGTAATGCAATCGAGAT
ACCCAGAAAATCTTCTTCATTCCTATCAAATGCTTCATCATCCTGCTCCA
GCTTCTTCTCCCGTCCGTTGACTCCCGTTCCCCCTCTCACTCATTTTCCC
ACCAGGAAAATGGGTACGCGTAGCCTTGTTCGGGCCAGTGCTGAGGTATC
TGATTTACAATCGAAAGTTACCAATAAAGTTTATTTCGATGTGAGCATTG
GGAATCCAGTAGGAAAGCTTGCTGGAAGAATCGTGATTGGATTGTACGGT
GATGATGTGCCCCAAACGGCAGAGAACTTCCGTGCTTTATGCACAGGAGA
GAAGGGCTTTGGTTACAAAGGTTCCACATTCCATCGTGTTATCAAAGATT
TCATGATCCAAGGAGGAGACTTTGATAAAGGCAATGGAACTGGAGGTAAA
AGTATATACGGCCGTACATTCAAAGATGAGAACTTCAAATTGTCGCATAT
TGGACCAGGAGTAGTTANTATGGCAAATGCAGGTCCCAACACTAATGGCA
GCCAATTTTTCATTTGTACGGTCAAGACCCCATGGCTAAATCAGAGGCAT
GTTGTCTTTGGGCCAATTTTGGAGGGCATGGACATTGTAAACCGTACTGA
GTCACCGGAAACTGAGAGGGGCCACGGCCTGCAAAGAAGGTGGTCCTAAT
AAATGCGGGCGACTCCCATG
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