EY739383

Overview
NameEY739383
Unique NameEY739383
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length904
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY739383 vs. ExPASy Swiss-Prot
Match: WAKLL_ARATH (Putative wall-associated receptor kinase-like 13 OS=Arabidopsis thaliana GN=WAKL13 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.722e-13
Identity = 41/97 (42.27%), Postives = 62/97 (63.92%), Query Frame = 1
Query:   10 VLVELLTGQKPISSIW-ANEGRNLTTYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANSRDDENNIQ 297
            VLVEL+TG+KP+ ++    E   L  YF   + EN LF+IID ++R   + E+++AV+++A RCL   G+ RP M+EV+  LERI +   D +  IQ
Sbjct:  644 VLVELITGEKPVITLSETQEITGLADYFRLAMRENRLFEIIDARIRNDCKLEQVIAVANLALRCLKKTGKTRPDMREVSTALERICSAPEDFQVQIQ 740          
BLAST of EY739383 vs. ExPASy Swiss-Prot
Match: WAKLM_ARATH (Wall-associated receptor kinase-like 17 OS=Arabidopsis thaliana GN=WAKL17 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 2.343e-12
Identity = 38/93 (40.86%), Postives = 59/93 (63.44%), Query Frame = 1
Query:   10 VLVELLTGQKPISSIW-ANEGRNLTTYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANSRDDE 285
            +L EL+TG KP+  +    E   L  +F   ++E  L DI+D ++R   + E++MAV+++A +CL+S GRNRP M+EV  ELERI  +  D +
Sbjct:  635 ILAELITGDKPVIMVQNTQEIIALAEHFRVAMKERRLSDIMDARIRDDSKPEQVMAVANLAMKCLSSRGRNRPNMREVFTELERICTSPEDSQ 727          
BLAST of EY739383 vs. ExPASy Swiss-Prot
Match: WAKLN_ARATH (Wall-associated receptor kinase-like 18 OS=Arabidopsis thaliana GN=WAKL18 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.519e-11
Identity = 38/93 (40.86%), Postives = 57/93 (61.29%), Query Frame = 1
Query:   10 VLVELLTGQKPISSIW-ANEGRNLTTYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIRANSRDDE 285
            +L EL+TG KP+  +    E   L  +F   ++E  L DIID ++R   + E++MAV+ VA +CL+S G+ RP M+EV  ELERI  +  D +
Sbjct:  644 ILAELITGDKPVIMVQNTQEIVALAEHFRVAMKEKRLTDIIDARIRNDCKPEQVMAVAKVAMKCLSSKGKKRPNMREVFTELERICTSPEDSQ 736          
BLAST of EY739383 vs. ExPASy Swiss-Prot
Match: WAK3_ARATH (Wall-associated receptor kinase 3 OS=Arabidopsis thaliana GN=WAK3 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.984e-11
Identity = 37/85 (43.53%), Postives = 49/85 (57.65%), Query Frame = 1
Query:   10 VLVELLTGQKPISSIWANEGRNLTTYFVECIEENCLFDIIDDQVRKSGEAEEIMAVSDVAKRCLNSYGRNRPTMKEVAMELERIR 264
            VL+ELL+GQK +        ++L +YFV   EEN L +IIDDQV      +EI   + +A  C    G  RP MKEVA +LE +R
Sbjct:  605 VLMELLSGQKALCFERPQASKHLVSYFVSATEENRLHEIIDDQVLNEDNLKEIQEAARIAAECTRLMGEERPRMKEVAAKLEALR 689          
The following BLAST results are available for this feature:
BLAST of EY739383 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
WAKLL_ARATH4.722e-1342.27Putative wall-associated receptor kinase-like 13 O... [more]
WAKLM_ARATH2.343e-1240.86Wall-associated receptor kinase-like 17 OS=Arabido... [more]
WAKLN_ARATH1.519e-1140.86Wall-associated receptor kinase-like 18 OS=Arabido... [more]
WAK3_ARATH1.984e-1143.53Wall-associated receptor kinase 3 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-056-F08-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY739383 ID=EY739383; Name=EY739383; organism=Citrus sinensis; type=EST; length=904bp
CACGCGTCCGTGCTTGTTGAGCTTTTAACAGGACAAAAACCAATATCTTC
TATTTGGGCAAATGAGGGTCGAAATTTGACAACATATTTTGTTGAATGTA
TAGAGGAGAATTGTTTGTTTGATATTATTGATGATCAAGTAAGAAAATCA
GGAGAGGCAGAAGAGATTATGGCCGTTTCTGACGTTGCGAAAAGATGCTT
AAATTCATATGGGAGGAACAGACCTACAATGAAAGAAGTTGCAATGGAAC
TAGAAAGAATAAGAGCGAACTCACGAGATGATGAGAACAATATTCAGAAA
TGTTATGGAAAGGTTGAATATATATGTGAGAACCGAAGTAATTGAGCCTT
GGGATATCGTTTCTACCTCTCCAAATTCTATTGTCATCTAGTTATAACAG
ATGCAATCTGATCGATAAATAAACAAACAAAAGATATGTTGTTGTATGCA
CTTTATTTGATTGTATAAAGTATATATTATGCTTTCTTGTTAAANAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAANANNAANNNNNANANNNNNNNNNNNNNNANN
NNNNNNNNNNNNNGGGGGGCGGCCGGTCCAAAGAGTCCCAGTTTTTTTTC
GGCGGTGGTGGGAAGTTAAAACCCCTCTTAAAGGGGCCCCCCAAATTCAA
CCCCGGGGGCCGGCGTTTAAACCCGTCGGGAAGGGAGAAAACCCCGGGGT
TTCCCCCAGTATATCCCCTTGCGAACCACTCCCCCCCTTCCCCCATTGGG
GTTAAAAACAAGAAAGCCCCCCCCGGATCGCGCTCCCCACAATGTGGCCC
CCCCTAAATGGGGAAGTGGGACCCCCCCTTTGTCGGGCGCATTAGACCGG
GGGG
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