EY739378

Overview
NameEY739378
Unique NameEY739378
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length886
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY739378 vs. ExPASy Swiss-Prot
Match: MSRB_ECOHS (Peptide methionine sulfoxide reductase msrB OS=Escherichia coli O9:H4 (strain HS) GN=msrB PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.051e-13
Identity = 40/90 (44.44%), Postives = 50/90 (55.56%), Query Frame = 2 
Query:  173 VYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINR---SPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKCIPGD 433
            VY+C  C   L+ S TK+DSGCGWP+FYE +     R         +R EI C  C  HLGHVF       PT ER+CVNS S++   G+
Sbjct:   43 VYHCLICDAPLFHSETKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLRFTDGE 130
[Close]
BLAST of EY739378 vs. ExPASy Swiss-Prot
Match: MSRB_ECODH (Peptide methionine sulfoxide reductase msrB OS=Escherichia coli (strain K12 / DH10B) GN=msrB PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.051e-13
Identity = 40/90 (44.44%), Postives = 50/90 (55.56%), Query Frame = 2 
Query:  173 VYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINR---SPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKCIPGD 433
            VY+C  C   L+ S TK+DSGCGWP+FYE +     R         +R EI C  C  HLGHVF       PT ER+CVNS S++   G+
Sbjct:   43 VYHCLICDAPLFHSQTKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLRFTDGE 130
[Close]
BLAST of EY739378 vs. ExPASy Swiss-Prot
Match: MSRB_ECOBW (Peptide methionine sulfoxide reductase msrB OS=Escherichia coli (strain K12 / BW2952) GN=msrB PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.051e-13
Identity = 40/90 (44.44%), Postives = 50/90 (55.56%), Query Frame = 2 
Query:  173 VYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINR---SPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKCIPGD 433
            VY+C  C   L+ S TK+DSGCGWP+FYE +     R         +R EI C  C  HLGHVF       PT ER+CVNS S++   G+
Sbjct:   43 VYHCLICDAPLFHSQTKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLRFTDGE 130
[Close]
BLAST of EY739378 vs. ExPASy Swiss-Prot
Match: MSRB_ECO8A (Peptide methionine sulfoxide reductase msrB OS=Escherichia coli O8 (strain IAI1) GN=msrB PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.051e-13
Identity = 40/90 (44.44%), Postives = 50/90 (55.56%), Query Frame = 2 
Query:  173 VYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINR---SPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKCIPGD 433
            VY+C  C   L+ S TK+DSGCGWP+FYE +     R         +R EI C  C  HLGHVF       PT ER+CVNS S++   G+
Sbjct:   43 VYHCLICDAPLFHSETKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLRFTDGE 130
[Close]
BLAST of EY739378 vs. ExPASy Swiss-Prot
Match: MSRB_ECO7I (Peptide methionine sulfoxide reductase msrB OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=msrB PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.051e-13
Identity = 40/90 (44.44%), Postives = 50/90 (55.56%), Query Frame = 2 
Query:  173 VYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINR---SPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKCIPGD 433
            VY+C  C   L+ S TK+DSGCGWP+FYE +     R         +R EI C  C  HLGHVF       PT ER+CVNS S++   G+
Sbjct:   43 VYHCLICDAPLFHSQTKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLRFTDGE 130
[Close]
BLAST of EY739378 vs. ExPASy Swiss-Prot
Match: MSRB_ECO5E (Peptide methionine sulfoxide reductase msrB OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=msrB PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.051e-13
Identity = 40/90 (44.44%), Postives = 50/90 (55.56%), Query Frame = 2 
Query:  173 VYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINR---SPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKCIPGD 433
            VY+C  C   L+ S TK+DSGCGWP+FYE +     R         +R EI C  C  HLGHVF       PT ER+CVNS S++   G+
Sbjct:   43 VYHCLICDAPLFHSQTKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLRFTDGE 130
[Close]
BLAST of EY739378 vs. ExPASy Swiss-Prot
Match: MSRB_ECO57 (Peptide methionine sulfoxide reductase msrB OS=Escherichia coli O157:H7 GN=msrB PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.051e-13
Identity = 40/90 (44.44%), Postives = 50/90 (55.56%), Query Frame = 2 
Query:  173 VYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINR---SPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKCIPGD 433
            VY+C  C   L+ S TK+DSGCGWP+FYE +     R         +R EI C  C  HLGHVF       PT ER+CVNS S++   G+
Sbjct:   43 VYHCLICDAPLFHSQTKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLRFTDGE 130
[Close]
BLAST of EY739378 vs. ExPASy Swiss-Prot
Match: MSRB_ECO55 (Peptide methionine sulfoxide reductase msrB OS=Escherichia coli (strain 55989 / EAEC) GN=msrB PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.051e-13
Identity = 40/90 (44.44%), Postives = 50/90 (55.56%), Query Frame = 2 
Query:  173 VYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINR---SPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKCIPGD 433
            VY+C  C   L+ S TK+DSGCGWP+FYE +     R         +R EI C  C  HLGHVF       PT ER+CVNS S++   G+
Sbjct:   43 VYHCLICDAPLFHSQTKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLRFTDGE 130
[Close]
BLAST of EY739378 vs. ExPASy Swiss-Prot
Match: MSRB_ECO27 (Peptide methionine sulfoxide reductase msrB OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=msrB PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.051e-13
Identity = 40/90 (44.44%), Postives = 50/90 (55.56%), Query Frame = 2 
Query:  173 VYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINR---SPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKCIPGD 433
            VY+C  C   L+ S TK+DSGCGWP+FYE +     R         +R EI C  C  HLGHVF       PT ER+CVNS S++   G+
Sbjct:   43 VYHCLICDAPLFHSQTKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLRFTDGE 130
[Close]
BLAST of EY739378 vs. ExPASy Swiss-Prot
Match: MSRB_ECO24 (Peptide methionine sulfoxide reductase msrB OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=msrB PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.051e-13
Identity = 40/90 (44.44%), Postives = 50/90 (55.56%), Query Frame = 2 
Query:  173 VYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINR---SPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKCIPGD 433
            VY+C  C   L+ S TK+DSGCGWP+FYE +     R         +R EI C  C  HLGHVF       PT ER+CVNS S++   G+
Sbjct:   43 VYHCLICDAPLFHSQTKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLRFTDGE 130
The following BLAST results are available for this feature:
BLAST of EY739378 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 139
Match NameE-valueIdentityDescription
MSRB_ECOHS2.051e-1344.44Peptide methionine sulfoxide reductase msrB OS=Esc... [more]
MSRB_ECODH2.051e-1344.44Peptide methionine sulfoxide reductase msrB OS=Esc... [more]
MSRB_ECOBW2.051e-1344.44Peptide methionine sulfoxide reductase msrB OS=Esc... [more]
MSRB_ECO8A2.051e-1344.44Peptide methionine sulfoxide reductase msrB OS=Esc... [more]
MSRB_ECO7I2.051e-1344.44Peptide methionine sulfoxide reductase msrB OS=Esc... [more]
MSRB_ECO5E2.051e-1344.44Peptide methionine sulfoxide reductase msrB OS=Esc... [more]
MSRB_ECO572.051e-1344.44Peptide methionine sulfoxide reductase msrB OS=Esc... [more]
MSRB_ECO552.051e-1344.44Peptide methionine sulfoxide reductase msrB OS=Esc... [more]
MSRB_ECO272.051e-1344.44Peptide methionine sulfoxide reductase msrB OS=Esc... [more]
MSRB_ECO242.051e-1344.44Peptide methionine sulfoxide reductase msrB OS=Esc... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-056-F01-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY739378 ID=EY739378; Name=EY739378; organism=Citrus sinensis; type=EST; length=886bp
CCACGCGTCCGAAAAGATTGAAACCAAACCCCATGACTGCAGCAGCAGAT
TCCGTTCAGAAAACCGAGGAAGAATGGCGGGCCATTCTCTCCCCCGAGCA
GTTTAGGATTCTACGCCAGAAAGGAACCGAGCCGCGAGGAACTGGGGAGT
ACAACAAGTTGTATGCGGATGGGTTTACAACTGTGCTGGCTGTGGAACTG
CGCTTTACAAGTCTGTTACCAAATTCGATTCTGGATGTGGGTGGCCAGCT
TTCTATGAAGGTCTTCCTGGAGCCATAAATCGCTCCCCTGATCCTGATGG
AAGGAGAACCGAGATAACTTGTGCTGCTTGCGGGGGTCACTTGGGTCACG
TCTTCAAAGGGGAGGGATTCAAAACGCCTACAGATGAACGCCACTGTGTC
AATAGTGTGTCAATTAAGTGTATTCCAGGTGATGCTCCTGCTTCATCATG
AAGAATGTAAGACTGTCATGGGGGTTGTTGAATAAGATTTGACTGTTTGT
CACTTCTGCCAATTGTTTTTGGCTTTAATGTCCTAGACATGGTGTTGTGT
GTATAATGATTACGCGGGCGATATTAGCCTATGCCATAGTATAAACCACT
TTGTGTGGTTTGGACGGGGGGGCGGGGCGGGGGGGAGGGGGGGGGGGAAG
GGGCGGCCGGTCAAGAGGAATCAGGCTTACGTGGGGGTGGTGGGGAGGGG
GAGCTGGTCTCATGTGTTACCTGAGTGCGATTCGGTGGGCGGTCGTGTGG
AGAGGTTGGGGCCGGGGAAAGCGGGGGGGTTGCCCGGGCGGGGGCGGGGG
GGGGGGGAGGTCGCTTTTGGGGAGGGGGGGGTTATGGGGGAGTGGGGGGG
TTGAGGTGGGCGTCGGGGGGGGGGTGGGGGGGGGGT
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