EY739378

Overview
NameEY739378
Unique NameEY739378
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length886
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY739378 vs. ExPASy Swiss-Prot
Match: MSRB_PSEA7 (Peptide methionine sulfoxide reductase msrB OS=Pseudomonas aeruginosa (strain PA7) GN=msrB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.332e-18
Identity = 38/88 (43.18%), Postives = 51/88 (57.95%), Query Frame = 2 
Query:  173 VYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINRSPDPDG---RRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKCIP 427
            VY+C  CGTAL+ S  K+DSG GWP++++ + G   R  D       R E+ C  C  HLGHVF       PT  R+C+NS S+K +P
Sbjct:   44 VYHCTCCGTALFDSDAKYDSGSGWPSYFQPVDGEAVRELDDFSHGMHRIEVRCGRCDAHLGHVFPDG--PRPTGLRYCINSASLKLVP 129

HSP 2 Score: 32.7278 bits (73), Expect = 5.332e-18
Identity = 16/40 (40.00%), Postives = 21/40 (52.50%), Query Frame = 3 
Query:   54 VQKTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADG 173
            + K  + WR  L+ EQF I R  GTE   +GEY+     G
Sbjct:    4 IDKPLDSWREELTEEQFHICRLGGTERAFSGEYHATKTPG 43
[Close]
BLAST of EY739378 vs. ExPASy Swiss-Prot
Match: MSRB_POLSJ (Peptide methionine sulfoxide reductase msrB OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=msrB PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 8.992e-18
Identity = 41/87 (47.13%), Postives = 49/87 (56.32%), Query Frame = 2 
Query:  176 YNCAGCGTALYKSVTKFDSGCGWPAFYEGL-PGAINRSPD--PDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKCIP 427
            Y C  C   L+ S +KFD+GCGWP+F + L  GAI    D      RTE  CA CG HLGHVF      TPT  R+C+NS S+   P
Sbjct:   51 YRCICCDAELFDSSSKFDAGCGWPSFSQELNKGAIEEHVDRAHGMTRTETVCANCGAHLGHVFPDG--PTPTGLRYCMNSASLDFKP 135

HSP 2 Score: 36.5798 bits (83), Expect = 8.992e-18
Identity = 18/45 (40.00%), Postives = 25/45 (55.56%), Query Frame = 3 
Query:   54 VQKTEEEWRAILS-----PEQFRILRQKGTEPRGTGEYNKLYADG 173
            +QKT+ EW+A+L+     P  F + R   TE   TG+Y   YA G
Sbjct:    5 IQKTDAEWKALLAEKGAEPVAFEVTRHAATERPFTGKYEDNYAQG 49
[Close]
BLAST of EY739378 vs. ExPASy Swiss-Prot
Match: MSRB3_PONAB (Methionine-R-sulfoxide reductase B3, mitochondrial OS=Pongo abelii GN=MSRB3 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.487e-17
Identity = 39/95 (41.05%), Postives = 58/95 (61.05%), Query Frame = 2 
Query:  173 VYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPG-AINRSPD--PDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKCIPGDAPASS 448
            +Y C  CGT L+KS TKFDSG GWP+F++ +   AI  + D      R E +C+ CG HLGH+F  +    PT +R+C+NS ++   P D+  ++
Sbjct:   76 IYKCVVCGTPLFKSETKFDSGSGWPSFHDVISSEAITFTDDFSYGMHRVETSCSQCGAHLGHIF--DDGPRPTGKRYCINSAALSFTPADSSGAA 168

HSP 2 Score: 29.261 bits (64), Expect = 1.487e-17
Identity = 12/30 (40.00%), Postives = 20/30 (66.67%), Query Frame = 3 
Query:   63 TEEEWRAILSPEQFRILRQKGTEPRGTGEY 152
            +++E R  L+P Q+ + ++KGTE    GEY
Sbjct:   39 SQQELRKRLTPLQYHVTQEKGTESAFEGEY 68
[Close]
BLAST of EY739378 vs. ExPASy Swiss-Prot
Match: MSRB3_HUMAN (Methionine-R-sulfoxide reductase B3, mitochondrial OS=Homo sapiens GN=MSRB3 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.934e-17
Identity = 39/95 (41.05%), Postives = 58/95 (61.05%), Query Frame = 2 
Query:  173 VYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPG-AINRSPD--PDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKCIPGDAPASS 448
            +Y C  CGT L+KS TKFDSG GWP+F++ +   AI  + D      R E +C+ CG HLGH+F  +    PT +R+C+NS ++   P D+  ++
Sbjct:   76 IYKCVVCGTPLFKSETKFDSGSGWPSFHDVINSEAITFTDDFSYGMHRVETSCSQCGAHLGHIF--DDGPRPTGKRYCINSAALSFTPADSSGTA 168

HSP 2 Score: 29.261 bits (64), Expect = 1.934e-17
Identity = 12/30 (40.00%), Postives = 20/30 (66.67%), Query Frame = 3 
Query:   63 TEEEWRAILSPEQFRILRQKGTEPRGTGEY 152
            +++E R  L+P Q+ + ++KGTE    GEY
Sbjct:   39 SQQELRKRLTPLQYHVTQEKGTESAFEGEY 68
[Close]
BLAST of EY739378 vs. ExPASy Swiss-Prot
Match: MSRB_PSEAE (Peptide methionine sulfoxide reductase msrB OS=Pseudomonas aeruginosa GN=msrB PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.579e-17
Identity = 36/91 (39.56%), Postives = 52/91 (57.14%), Query Frame = 2 
Query:  173 VYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINRSPDPDG---RRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKCIPGDA 436
            +Y+C  CGTAL+ S  K+DSG GWP++++ +     R  D       R E+ C  C  HLGHVF       PT  R+C+NS S+K +P ++
Sbjct:   44 IYHCTCCGTALFDSDAKYDSGSGWPSYFQPVDAEAVRELDDFSHGMHRIEVRCGRCDAHLGHVFPDG--PRPTGLRYCINSASLKLVPRES 132

HSP 2 Score: 32.7278 bits (73), Expect = 2.579e-17
Identity = 16/40 (40.00%), Postives = 21/40 (52.50%), Query Frame = 3 
Query:   54 VQKTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADG 173
            + K  + WR  L+ EQF I R  GTE   +GEY+     G
Sbjct:    4 IDKPLDSWREELTEEQFHICRLGGTERAFSGEYHATKTPG 43
[Close]
BLAST of EY739378 vs. ExPASy Swiss-Prot
Match: MSRB_PSEAB (Peptide methionine sulfoxide reductase msrB OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=msrB PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.579e-17
Identity = 36/91 (39.56%), Postives = 52/91 (57.14%), Query Frame = 2 
Query:  173 VYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINRSPDPDG---RRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKCIPGDA 436
            +Y+C  CGTAL+ S  K+DSG GWP++++ +     R  D       R E+ C  C  HLGHVF       PT  R+C+NS S+K +P ++
Sbjct:   44 IYHCTCCGTALFDSDAKYDSGSGWPSYFQPVDAEAVRELDDFSHGMHRIEVRCGRCDAHLGHVFPDG--PRPTGLRYCINSASLKLVPRES 132

HSP 2 Score: 32.7278 bits (73), Expect = 2.579e-17
Identity = 16/40 (40.00%), Postives = 21/40 (52.50%), Query Frame = 3 
Query:   54 VQKTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADG 173
            + K  + WR  L+ EQF I R  GTE   +GEY+     G
Sbjct:    4 IDKPLDSWREELTEEQFHICRLGGTERAFSGEYHATKTPG 43
[Close]
BLAST of EY739378 vs. ExPASy Swiss-Prot
Match: MSRB_PSEA8 (Peptide methionine sulfoxide reductase msrB OS=Pseudomonas aeruginosa (strain LESB58) GN=msrB PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.579e-17
Identity = 36/91 (39.56%), Postives = 52/91 (57.14%), Query Frame = 2 
Query:  173 VYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINRSPDPDG---RRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKCIPGDA 436
            +Y+C  CGTAL+ S  K+DSG GWP++++ +     R  D       R E+ C  C  HLGHVF       PT  R+C+NS S+K +P ++
Sbjct:   44 IYHCTCCGTALFDSDAKYDSGSGWPSYFQPVDAEAVRELDDFSHGMHRIEVRCGRCDAHLGHVFPDG--PRPTGLRYCINSASLKLVPRES 132

HSP 2 Score: 32.7278 bits (73), Expect = 2.579e-17
Identity = 16/40 (40.00%), Postives = 21/40 (52.50%), Query Frame = 3 
Query:   54 VQKTEEEWRAILSPEQFRILRQKGTEPRGTGEYNKLYADG 173
            + K  + WR  L+ EQF I R  GTE   +GEY+     G
Sbjct:    4 IDKPLDSWREELTEEQFHICRLGGTERAFSGEYHATKTPG 43
[Close]
BLAST of EY739378 vs. ExPASy Swiss-Prot
Match: MSRB_LEPIN (Peptide methionine sulfoxide reductase msrB OS=Leptospira interrogans GN=msrB PE=3 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 3.057e-17
Identity = 47/113 (41.59%), Postives = 63/113 (55.75%), Query Frame = 2 
Query:  113 TPERNRAARNWGVQQVVCGWVYN--------CAGCGTALYKSVTKFDSGCGWPAFYEGL-PGAINRSPDPDG--RRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIK 418
            TPE+ R  R  G +    G +Y         CA CG  L+ S TK++SG GWP+FY+ +  G +++  D      RTEI C+ CGGHLGHVF       PT  R+C+NS S+K
Sbjct:   18 TPEQYRILRQKGTEMAFTGALYKNQDKGTYVCAACGAVLFSSDTKYESGSGWPSFYQPVKDGVVDKQKDSSHGMERTEILCSKCGGHLGHVFNDG--PRPTGLRYCINSASLK 128
[Close]
BLAST of EY739378 vs. ExPASy Swiss-Prot
Match: MSRB_LEPIC (Peptide methionine sulfoxide reductase msrB OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=msrB PE=3 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 3.057e-17
Identity = 47/113 (41.59%), Postives = 63/113 (55.75%), Query Frame = 2 
Query:  113 TPERNRAARNWGVQQVVCGWVYN--------CAGCGTALYKSVTKFDSGCGWPAFYEGL-PGAINRSPDPDG--RRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIK 418
            TPE+ R  R  G +    G +Y         CA CG  L+ S TK++SG GWP+FY+ +  G +++  D      RTEI C+ CGGHLGHVF       PT  R+C+NS S+K
Sbjct:   18 TPEQYRILRQKGTEMAFTGALYKNQDKGTYVCAACGAVLFSSDTKYESGSGWPSFYQPVKDGVVDKQKDSSHGMERTEILCSKCGGHLGHVFNDG--PRPTGLRYCINSASLK 128
[Close]
BLAST of EY739378 vs. ExPASy Swiss-Prot
Match: MSRB_SYNR3 (Peptide methionine sulfoxide reductase msrB OS=Synechococcus sp. (strain RCC307) GN=msrB PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.895e-17
Identity = 51/112 (45.54%), Postives = 63/112 (56.25%), Query Frame = 2 
Query:  113 TPERNRAARNWGVQQVVCG--W------VYNCAGCGTALYKSVTKFDSGCGWPAFYEGL-PGAINRSPDPDGR--RTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSI 415
            TPE+ R  R  G ++   G  W      +Y C  CG  L++S  KFDSG GWP+F+EG+ P AI    D      RTEI CA C  HLGHVF+     TPT  R+CVNS S+
Sbjct:   21 TPEQFRITREGGTERAFTGAYWNHKGDGMYRCICCGAELFRSDRKFDSGTGWPSFWEGVNPEAIRTIQDVSHGMVRTEIRCAKCDSHLGHVFQDS--PTPTGLRYCVNSASL 130
The following BLAST results are available for this feature:
BLAST of EY739378 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 139
Match NameE-valueIdentityDescription
MSRB_PSEA75.332e-1843.18Peptide methionine sulfoxide reductase msrB OS=Pse... [more]
MSRB_POLSJ8.992e-1847.13Peptide methionine sulfoxide reductase msrB OS=Pol... [more]
MSRB3_PONAB1.487e-1741.05Methionine-R-sulfoxide reductase B3, mitochondrial... [more]
MSRB3_HUMAN1.934e-1741.05Methionine-R-sulfoxide reductase B3, mitochondrial... [more]
MSRB_PSEAE2.579e-1739.56Peptide methionine sulfoxide reductase msrB OS=Pse... [more]
MSRB_PSEAB2.579e-1739.56Peptide methionine sulfoxide reductase msrB OS=Pse... [more]
MSRB_PSEA82.579e-1739.56Peptide methionine sulfoxide reductase msrB OS=Pse... [more]
MSRB_LEPIN3.057e-1741.59Peptide methionine sulfoxide reductase msrB OS=Lep... [more]
MSRB_LEPIC3.057e-1741.59Peptide methionine sulfoxide reductase msrB OS=Lep... [more]
MSRB_SYNR38.895e-1745.54Peptide methionine sulfoxide reductase msrB OS=Syn... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-056-F01-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY739378 ID=EY739378; Name=EY739378; organism=Citrus sinensis; type=EST; length=886bp
CCACGCGTCCGAAAAGATTGAAACCAAACCCCATGACTGCAGCAGCAGAT
TCCGTTCAGAAAACCGAGGAAGAATGGCGGGCCATTCTCTCCCCCGAGCA
GTTTAGGATTCTACGCCAGAAAGGAACCGAGCCGCGAGGAACTGGGGAGT
ACAACAAGTTGTATGCGGATGGGTTTACAACTGTGCTGGCTGTGGAACTG
CGCTTTACAAGTCTGTTACCAAATTCGATTCTGGATGTGGGTGGCCAGCT
TTCTATGAAGGTCTTCCTGGAGCCATAAATCGCTCCCCTGATCCTGATGG
AAGGAGAACCGAGATAACTTGTGCTGCTTGCGGGGGTCACTTGGGTCACG
TCTTCAAAGGGGAGGGATTCAAAACGCCTACAGATGAACGCCACTGTGTC
AATAGTGTGTCAATTAAGTGTATTCCAGGTGATGCTCCTGCTTCATCATG
AAGAATGTAAGACTGTCATGGGGGTTGTTGAATAAGATTTGACTGTTTGT
CACTTCTGCCAATTGTTTTTGGCTTTAATGTCCTAGACATGGTGTTGTGT
GTATAATGATTACGCGGGCGATATTAGCCTATGCCATAGTATAAACCACT
TTGTGTGGTTTGGACGGGGGGGCGGGGCGGGGGGGAGGGGGGGGGGGAAG
GGGCGGCCGGTCAAGAGGAATCAGGCTTACGTGGGGGTGGTGGGGAGGGG
GAGCTGGTCTCATGTGTTACCTGAGTGCGATTCGGTGGGCGGTCGTGTGG
AGAGGTTGGGGCCGGGGAAAGCGGGGGGGTTGCCCGGGCGGGGGCGGGGG
GGGGGGGAGGTCGCTTTTGGGGAGGGGGGGGTTATGGGGGAGTGGGGGGG
TTGAGGTGGGCGTCGGGGGGGGGGTGGGGGGGGGGT
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