EY739378

Overview
NameEY739378
Unique NameEY739378
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length886
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY739378 vs. ExPASy Swiss-Prot
Match: MSRB_SHIF8 (Peptide methionine sulfoxide reductase msrB OS=Shigella flexneri serotype 5b (strain 8401) GN=msrB PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.051e-13
Identity = 40/90 (44.44%), Postives = 50/90 (55.56%), Query Frame = 2 
Query:  173 VYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINR---SPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKCIPGD 433
            VY+C  C   L+ S TK+DSGCGWP+FYE +     R         +R EI C  C  HLGHVF       PT ER+CVNS S++   G+
Sbjct:   43 VYHCLICDAPLFHSETKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLRFTDGE 130
[Close]
BLAST of EY739378 vs. ExPASy Swiss-Prot
Match: MSRB_SHIDS (Peptide methionine sulfoxide reductase msrB OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=msrB PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.051e-13
Identity = 40/90 (44.44%), Postives = 50/90 (55.56%), Query Frame = 2 
Query:  173 VYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINR---SPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKCIPGD 433
            VY+C  C   L+ S TK+DSGCGWP+FYE +     R         +R EI C  C  HLGHVF       PT ER+CVNS S++   G+
Sbjct:   43 VYHCLICDAPLFHSQTKYDSGCGWPSFYEPVSEESIRYIKDLSHGVQRIEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLRFTDGE 130
[Close]
BLAST of EY739378 vs. ExPASy Swiss-Prot
Match: MSRB_SHIBS (Peptide methionine sulfoxide reductase msrB OS=Shigella boydii serotype 4 (strain Sb227) GN=msrB PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.051e-13
Identity = 40/90 (44.44%), Postives = 50/90 (55.56%), Query Frame = 2 
Query:  173 VYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINR---SPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKCIPGD 433
            VY+C  C   L+ S TK+DSGCGWP+FYE +     R         +R EI C  C  HLGHVF       PT ER+CVNS S++   G+
Sbjct:   43 VYHCLICDAPLFHSETKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLRFTDGE 130
[Close]
BLAST of EY739378 vs. ExPASy Swiss-Prot
Match: MSRB_ECOSM (Peptide methionine sulfoxide reductase msrB OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=msrB PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.051e-13
Identity = 40/90 (44.44%), Postives = 50/90 (55.56%), Query Frame = 2 
Query:  173 VYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINR---SPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKCIPGD 433
            VY+C  C   L+ S TK+DSGCGWP+FYE +     R         +R EI C  C  HLGHVF       PT ER+CVNS S++   G+
Sbjct:   43 VYHCLICDAPLFHSQTKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLRFTDGE 130
[Close]
BLAST of EY739378 vs. ExPASy Swiss-Prot
Match: MSRB_ECOSE (Peptide methionine sulfoxide reductase msrB OS=Escherichia coli (strain SE11) GN=msrB PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.051e-13
Identity = 40/90 (44.44%), Postives = 50/90 (55.56%), Query Frame = 2 
Query:  173 VYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINR---SPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKCIPGD 433
            VY+C  C   L+ S TK+DSGCGWP+FYE +     R         +R EI C  C  HLGHVF       PT ER+CVNS S++   G+
Sbjct:   43 VYHCLICDAPLFHSQTKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLRFTDGE 130
[Close]
BLAST of EY739378 vs. ExPASy Swiss-Prot
Match: MSRB_ECOLU (Peptide methionine sulfoxide reductase msrB OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=msrB PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.051e-13
Identity = 40/90 (44.44%), Postives = 50/90 (55.56%), Query Frame = 2 
Query:  173 VYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINR---SPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKCIPGD 433
            VY+C  C   L+ S TK+DSGCGWP+FYE +     R         +R EI C  C  HLGHVF       PT ER+CVNS S++   G+
Sbjct:   43 VYHCLICDAPLFHSQTKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLRFTDGE 130
[Close]
BLAST of EY739378 vs. ExPASy Swiss-Prot
Match: MSRB_ECOLI (Peptide methionine sulfoxide reductase msrB OS=Escherichia coli (strain K12) GN=msrB PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.051e-13
Identity = 40/90 (44.44%), Postives = 50/90 (55.56%), Query Frame = 2 
Query:  173 VYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINR---SPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKCIPGD 433
            VY+C  C   L+ S TK+DSGCGWP+FYE +     R         +R EI C  C  HLGHVF       PT ER+CVNS S++   G+
Sbjct:   43 VYHCLICDAPLFHSQTKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLRFTDGE 130
[Close]
BLAST of EY739378 vs. ExPASy Swiss-Prot
Match: MSRB_ECOLC (Peptide methionine sulfoxide reductase msrB OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=msrB PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.051e-13
Identity = 40/90 (44.44%), Postives = 50/90 (55.56%), Query Frame = 2 
Query:  173 VYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINR---SPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKCIPGD 433
            VY+C  C   L+ S TK+DSGCGWP+FYE +     R         +R EI C  C  HLGHVF       PT ER+CVNS S++   G+
Sbjct:   43 VYHCLICDAPLFHSETKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLRFTDGE 130
[Close]
BLAST of EY739378 vs. ExPASy Swiss-Prot
Match: MSRB_ECOL6 (Peptide methionine sulfoxide reductase msrB OS=Escherichia coli O6 GN=msrB PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.051e-13
Identity = 40/90 (44.44%), Postives = 50/90 (55.56%), Query Frame = 2 
Query:  173 VYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINR---SPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKCIPGD 433
            VY+C  C   L+ S TK+DSGCGWP+FYE +     R         +R EI C  C  HLGHVF       PT ER+CVNS S++   G+
Sbjct:   43 VYHCLICDAPLFHSQTKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLRFTDGE 130
[Close]
BLAST of EY739378 vs. ExPASy Swiss-Prot
Match: MSRB_ECOL5 (Peptide methionine sulfoxide reductase msrB OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=msrB PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.051e-13
Identity = 40/90 (44.44%), Postives = 50/90 (55.56%), Query Frame = 2 
Query:  173 VYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINR---SPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKCIPGD 433
            VY+C  C   L+ S TK+DSGCGWP+FYE +     R         +R EI C  C  HLGHVF       PT ER+CVNS S++   G+
Sbjct:   43 VYHCLICDAPLFHSQTKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDG--PQPTGERYCVNSASLRFTDGE 130
The following BLAST results are available for this feature:
BLAST of EY739378 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 139
Match NameE-valueIdentityDescription
MSRB_SHIF82.051e-1344.44Peptide methionine sulfoxide reductase msrB OS=Shi... [more]
MSRB_SHIDS2.051e-1344.44Peptide methionine sulfoxide reductase msrB OS=Shi... [more]
MSRB_SHIBS2.051e-1344.44Peptide methionine sulfoxide reductase msrB OS=Shi... [more]
MSRB_ECOSM2.051e-1344.44Peptide methionine sulfoxide reductase msrB OS=Esc... [more]
MSRB_ECOSE2.051e-1344.44Peptide methionine sulfoxide reductase msrB OS=Esc... [more]
MSRB_ECOLU2.051e-1344.44Peptide methionine sulfoxide reductase msrB OS=Esc... [more]
MSRB_ECOLI2.051e-1344.44Peptide methionine sulfoxide reductase msrB OS=Esc... [more]
MSRB_ECOLC2.051e-1344.44Peptide methionine sulfoxide reductase msrB OS=Esc... [more]
MSRB_ECOL62.051e-1344.44Peptide methionine sulfoxide reductase msrB OS=Esc... [more]
MSRB_ECOL52.051e-1344.44Peptide methionine sulfoxide reductase msrB OS=Esc... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-056-F01-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY739378 ID=EY739378; Name=EY739378; organism=Citrus sinensis; type=EST; length=886bp
CCACGCGTCCGAAAAGATTGAAACCAAACCCCATGACTGCAGCAGCAGAT
TCCGTTCAGAAAACCGAGGAAGAATGGCGGGCCATTCTCTCCCCCGAGCA
GTTTAGGATTCTACGCCAGAAAGGAACCGAGCCGCGAGGAACTGGGGAGT
ACAACAAGTTGTATGCGGATGGGTTTACAACTGTGCTGGCTGTGGAACTG
CGCTTTACAAGTCTGTTACCAAATTCGATTCTGGATGTGGGTGGCCAGCT
TTCTATGAAGGTCTTCCTGGAGCCATAAATCGCTCCCCTGATCCTGATGG
AAGGAGAACCGAGATAACTTGTGCTGCTTGCGGGGGTCACTTGGGTCACG
TCTTCAAAGGGGAGGGATTCAAAACGCCTACAGATGAACGCCACTGTGTC
AATAGTGTGTCAATTAAGTGTATTCCAGGTGATGCTCCTGCTTCATCATG
AAGAATGTAAGACTGTCATGGGGGTTGTTGAATAAGATTTGACTGTTTGT
CACTTCTGCCAATTGTTTTTGGCTTTAATGTCCTAGACATGGTGTTGTGT
GTATAATGATTACGCGGGCGATATTAGCCTATGCCATAGTATAAACCACT
TTGTGTGGTTTGGACGGGGGGGCGGGGCGGGGGGGAGGGGGGGGGGGAAG
GGGCGGCCGGTCAAGAGGAATCAGGCTTACGTGGGGGTGGTGGGGAGGGG
GAGCTGGTCTCATGTGTTACCTGAGTGCGATTCGGTGGGCGGTCGTGTGG
AGAGGTTGGGGCCGGGGAAAGCGGGGGGGTTGCCCGGGCGGGGGCGGGGG
GGGGGGGAGGTCGCTTTTGGGGAGGGGGGGGTTATGGGGGAGTGGGGGGG
TTGAGGTGGGCGTCGGGGGGGGGGTGGGGGGGGGGT
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