EY739373

Overview
NameEY739373
Unique NameEY739373
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length831
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2877 contig Csv1_Contig2877:70..903. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY739373 vs. ExPASy Swiss-Prot
Match: KMCP1_RAT (Kidney mitochondrial carrier protein 1 OS=Rattus norvegicus GN=Slc25a30 PE=2 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 9.648e-19
Identity = 32/92 (34.78%), Postives = 48/92 (52.17%), Query Frame = 2
Query:  425 DVPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVKQ 700
            D  L   ++ G+ +G +   IANPTD++K+R+QA+     G      G +  + +I +QEG   LW GV     R AI+   EL  YD  K+
Sbjct:  103 DETLLINVVCGILSGVISSAIANPTDVLKIRMQAQNSAVQG------GMIGNFISIYQQEGTRGLWKGVSLTAQRAAIVVGVELPVYDITKK 188          

HSP 2 Score: 55.8398 bits (133), Expect = 9.648e-19
Identity = 29/76 (38.16%), Postives = 45/76 (59.21%), Query Frame = 1
Query:  169 EICTIPLDTAKVRLQLQKKPVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVK 396
            E  T P+D  K RLQ+Q +        + +Y+GML  +  I REEG+ +L+ GI P + RQ  +G ++IG Y+ +K
Sbjct:   20 ECGTFPIDLTKTRLQIQGQTNDAKFREI-RYRGMLHALMRIGREEGLRALYSGIAPAMLRQASYGTIKIGTYQSLK 94          

HSP 3 Score: 51.9878 bits (123), Expect = 2.280e-12
Identity = 31/94 (32.98%), Postives = 47/94 (50.00%), Query Frame = 2
Query:  419 VGDVPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVKQ 700
            +GD  +S   L+  T G +G + +NP D+V+ R+  +  L  G    Y G L+      K EGF AL+ G  PN  R    N     +Y+Q+K+
Sbjct:  196 MGDT-VSTHFLSSFTCGLVGALASNPVDVVRTRMMNQRDLRDGRCSGYKGTLDCLLQTWKNEGFFALYKGFWPNWLRLGPWNIIFFLTYEQLKK 288          

HSP 4 Score: 41.2022 bits (95), Expect = 2.280e-12
Identity = 22/71 (30.99%), Postives = 34/71 (47.89%), Query Frame = 1
Query:  184 PLDTAKVRLQLQKKPVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVK 396
            P D  K+R+Q Q   V G         GM+G   +I ++EG   LWKG+     R  +  G+ + +Y+  K
Sbjct:  126 PTDVLKIRMQAQNSAVQG---------GMIGNFISIYQQEGTRGLWKGVSLTAQRAAIVVGVELPVYDITK 187          
BLAST of EY739373 vs. ExPASy Swiss-Prot
Match: DIC_HUMAN (Mitochondrial dicarboxylate carrier OS=Homo sapiens GN=SLC25A10 PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.632e-18
Identity = 36/101 (35.64%), Postives = 56/101 (55.45%), Query Frame = 2
Query:  404 VGKDFVGDVPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVKQTI 706
            V K   G +P  +K+L G  +G  G  +  P DLV VR+Q + KLP G  R Y+ AL+    + ++EG   L++G     +R A++   +L+ YDQ KQ +
Sbjct:   89 VAKGSQGPLPFHEKVLLGSVSGLAGGFVGTPADLVNVRMQNDVKLPQGQRRNYAHALDGLYRVAREEGLRRLFSGATMASSRGALVTVGQLSCYDQAKQLV 189          

HSP 2 Score: 40.0466 bits (92), Expect = 1.632e-18
Identity = 26/80 (32.50%), Postives = 39/80 (48.75%), Query Frame = 1
Query:  175 CTIPLDTAKVRLQLQKKPVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTVCGQG 414
            CT PLD  KV LQ Q++      V L     M G    + R +G+++L+ G+   L RQ  +   R  +YE V+    +G
Sbjct:   23 CTHPLDLLKVHLQTQQE------VKL----RMTGMALRVVRTDGILALYSGLSASLCRQMTYSLTRFAIYETVRDRVAKG 92          
BLAST of EY739373 vs. ExPASy Swiss-Prot
Match: DIC_MOUSE (Mitochondrial dicarboxylate carrier OS=Mus musculus GN=Slc25a10 PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 2.760e-18
Identity = 38/104 (36.54%), Postives = 57/104 (54.81%), Query Frame = 2
Query:  395 RLYVGKDFVGDVPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVKQTI 706
            R Y+ KD  G +P   K+L G  +G  G  +  P DLV VR+Q + KLPP   R YS AL+    + ++E    L++G     +R A++   +L+ YDQ KQ +
Sbjct:   85 RDYMTKDSQGPLPFYNKVLLGGISGLTGGFVGTPADLVNVRMQNDMKLPPSQRRNYSHALDGLYRVAREESLRKLFSGATMASSRGALVTVGQLSCYDQAKQLV 188          

HSP 2 Score: 37.7354 bits (86), Expect = 2.760e-18
Identity = 24/74 (32.43%), Postives = 36/74 (48.65%), Query Frame = 1
Query:  175 CTIPLDTAKVRLQLQKKPVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVK 396
            CT PLD  KV LQ Q++      V L     M G    + R +G ++L+ G+   L RQ  +   R  +YE ++
Sbjct:   22 CTHPLDLLKVHLQTQQE------VKL----RMTGMALQVVRTDGFLALYNGLSASLCRQMTYSLTRFAIYETMR 85          
BLAST of EY739373 vs. ExPASy Swiss-Prot
Match: S2534_MOUSE (Solute carrier family 25 member 34 OS=Mus musculus GN=Slc25a34 PE=2 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 2.248e-17
Identity = 33/86 (38.37%), Postives = 50/86 (58.14%), Query Frame = 2
Query:  446 ILAGLTTGALGIMIANPTDLVKVRLQAE--GKLPPGVPRRYSGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVK 697
            ++AG   GALG  + +P  LVK +LQA+    +  G   ++ G L+A  TI +Q+G   LW GVG  V R  + +AA+LA++   K
Sbjct:  121 VVAGAAAGALGAFVGSPAYLVKTQLQAQTVATMAVGHQHQHQGVLSALETIWRQQGMLGLWRGVGGAVPRVTVGSAAQLATFTSAK 206          

HSP 2 Score: 47.7506 bits (112), Expect = 2.248e-17
Identity = 31/82 (37.80%), Postives = 42/82 (51.22%), Query Frame = 1
Query:  172 ICTIPLDTAKVRLQLQKKPVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTVCGQGL 417
            + T PL+  K RLQLQ +  A      P Y+G + +VA +AR +G+  L KG+  GL  Q L  G+R   Y      C  GL
Sbjct:   36 VFTNPLEVVKTRLQLQGELQAPGTYPRP-YRGFVSSVAAVARADGLWGLQKGLAAGLLYQGLMNGVRFYCY---SLACQAGL 113          
BLAST of EY739373 vs. ExPASy Swiss-Prot
Match: S2534_RAT (Solute carrier family 25 member 34 OS=Rattus norvegicus GN=Slc25a34 PE=2 SV=2)

HSP 1 Score: 62.3882 bits (150), Expect = 6.421e-17
Identity = 33/86 (38.37%), Postives = 50/86 (58.14%), Query Frame = 2
Query:  446 ILAGLTTGALGIMIANPTDLVKVRLQAE--GKLPPGVPRRYSGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVK 697
            ++AG   GALG  + +P  LVK +LQA+    +  G   ++ G L+A  TI +Q+G   LW GVG  V R  + +AA+LA++   K
Sbjct:  121 VVAGAVAGALGAFVGSPAYLVKTQLQAQTGAAVAVGHQHQHQGVLSALETIWRQQGMLGLWRGVGAAVPRVTVGSAAQLATFTSAK 206          

HSP 2 Score: 46.2098 bits (108), Expect = 6.421e-17
Identity = 30/82 (36.59%), Postives = 41/82 (50.00%), Query Frame = 1
Query:  172 ICTIPLDTAKVRLQLQKKPVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTVCGQGL 417
            + T PL+  K RLQLQ +  A      P Y+G + +V  +AR +G+  L KG+  GL  Q L  G+R   Y      C  GL
Sbjct:   36 VFTNPLEVVKTRLQLQGELQAPGTYPRP-YRGFVSSVTAVARADGLWGLQKGLAAGLLYQGLMNGVRFYCY---SLACQAGL 113          
BLAST of EY739373 vs. ExPASy Swiss-Prot
Match: M2OM_NEUCR (Putative mitochondrial 2-oxoglutarate/malate carrier protein OS=Neurospora crassa GN=NCU10732 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.094e-16
Identity = 37/112 (33.04%), Postives = 56/112 (50.00%), Query Frame = 2
Query:  428 VPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVK-----QTIWKIPGSQITSSLIS 748
            V   ++  AGL  G L  MI NP DL  +R+Q++G  P    + Y   ++A   I + EG AALW G  P V R   +N  +LA + + K     +T W      +++S I+
Sbjct:  140 VGFKERASAGLAAGGLAAMIGNPADLALIRMQSDGLKPVAERKNYKSVIDALGGIARNEGVAALWAGAAPTVVRAMALNFGQLAFFSEAKAQLKARTQWSSKVQTLSASAIA 251          

HSP 2 Score: 35.039 bits (79), Expect = 3.094e-16
Identity = 23/68 (33.82%), Postives = 33/68 (48.53%), Query Frame = 1
Query:  184 PLDTAKVRLQLQKKPVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYE 387
            P+D  KVR+QL     AG+G A       LG    I      + L+ G+  GL RQ ++   RIG ++
Sbjct:   61 PIDMIKVRIQL-----AGEGKAGGPKPTPLGVTRDIIASGKAMDLYTGLSAGLLRQAVYTTARIGCFD 123          
BLAST of EY739373 vs. ExPASy Swiss-Prot
Match: S2534_HUMAN (Solute carrier family 25 member 34 OS=Homo sapiens GN=SLC25A34 PE=2 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 6.810e-16
Identity = 32/91 (35.16%), Postives = 49/91 (53.85%), Query Frame = 2
Query:  446 ILAGLTTGALGIMIANPTDLVKVRLQAE--GKLPPGVPRRYSGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVKQTIWK 712
            ++AG   GALG  + +P  L+K +LQA+    +  G    +   L A  TI +Q+G   LW GVG  V R  + +AA+LA++   K  + K
Sbjct:  107 VVAGAVAGALGAFVGSPAYLIKTQLQAQTVAAVAVGHQHNHQTVLGALETIWRQQGLLGLWQGVGGAVPRVMVGSAAQLATFASAKAWVQK 197          

HSP 2 Score: 46.9802 bits (110), Expect = 6.810e-16
Identity = 31/82 (37.80%), Postives = 41/82 (50.00%), Query Frame = 1
Query:  172 ICTIPLDTAKVRLQLQKKPVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTVCGQGL 417
            + T PL+  K RLQLQ +  A      P Y G + +VA +AR +G+  L KG+  GL  Q L  G+R   Y      C  GL
Sbjct:   22 VFTNPLEVVKTRLQLQGELQARGTYPRP-YHGFIASVAAVARADGLWGLQKGLAAGLLYQGLMNGVRFYCY---SLACQAGL 99          
BLAST of EY739373 vs. ExPASy Swiss-Prot
Match: S2534_BOVIN (Solute carrier family 25 member 34 OS=Bos taurus GN=SLC25A34 PE=2 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 1.495e-15
Identity = 33/86 (38.37%), Postives = 48/86 (55.81%), Query Frame = 2
Query:  446 ILAGLTTGALGIMIANPTDLVKVRLQAE--GKLPPGVPRRYSGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVK 697
            ++AG   GALG  + +P  LVK +LQA+    +  G    +   L A  TI +Q+G A LW GVG  V R  + +AA+LA++   K
Sbjct:  107 VVAGAVAGALGAFVGSPAYLVKTQLQAQTVAAMAVGHQHHHESLLGALETIWRQQGLAGLWRGVGGAVPRVMVGSAAQLATFASAK 192          

HSP 2 Score: 43.8986 bits (102), Expect = 1.495e-15
Identity = 28/82 (34.15%), Postives = 40/82 (48.78%), Query Frame = 1
Query:  172 ICTIPLDTAKVRLQLQKKPVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTVCGQGL 417
            + T PL+  K RLQLQ + +   G     Y+G + +V  + R +G+  L KG+  GL  Q L  G+R   Y      C  GL
Sbjct:   22 VFTNPLEVVKTRLQLQGE-LQKRGTYPRLYRGFVASVVAVVRADGLCGLQKGLAAGLLYQGLMNGVRFYCY---SLACQAGL 99          
BLAST of EY739373 vs. ExPASy Swiss-Prot
Match: S2534_DANRE (Solute carrier family 25 member 34 OS=Danio rerio GN=slc25a34 PE=2 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 1.578e-14
Identity = 35/103 (33.98%), Postives = 53/103 (51.46%), Query Frame = 2
Query:  446 ILAGLTTGALGIMIANPTDLVKVRLQAE--GKLPPGVPRRYSGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASY----DQVKQTIWKIPGSQITS 736
            ++AG   GALG  IA+P  LVK  LQA+    +  G    + G  +A  +I ++EG   LW GV   V R  + +A +LA++    D +  T W  P S + +
Sbjct:  125 LIAGAAAGALGAFIASPAYLVKTHLQAQTVAAIAVGHQHNHQGMSSALVSIYRREGVCGLWRGVNGAVPRVMVGSATQLATFSSAKDWITHTQWFSPLSSLNT 227          

HSP 2 Score: 43.8986 bits (102), Expect = 1.578e-14
Identity = 26/71 (36.62%), Postives = 38/71 (53.52%), Query Frame = 1
Query:  172 ICTIPLDTAKVRLQLQKKPVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLY 384
            + T PL+  K RLQLQ + +   G     Y+G+L  +  + R +G+  L KG+   L  Q L  GLR+G Y
Sbjct:   40 VFTNPLEVVKTRLQLQGE-LRARGSYRRLYRGVLQALWVVGRTDGLRGLQKGLTAALLYQGLMNGLRLGSY 109          
BLAST of EY739373 vs. ExPASy Swiss-Prot
Match: SFC1_YEAST (Succinate/fumarate mitochondrial transporter OS=Saccharomyces cerevisiae GN=SFC1 PE=1 SV=2)

HSP 1 Score: 60.077 bits (144), Expect = 3.459e-14
Identity = 34/96 (35.42%), Postives = 53/96 (55.21%), Query Frame = 2
Query:  422 GDVPLSKKILAGLTTGAL-GIMIANPTDLVKVRLQAEGKLP--PGVPRRYSGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVKQ 700
            G V      +AG+  G    +++ NP ++VK+RLQA+   P  P    +Y+ A++A  TIVK+EG +AL+ GV    AR A    A    Y ++K+
Sbjct:  106 GIVSTGNTFVAGVGAGITEAVLVVNPMEVVKIRLQAQHLTPSEPNAGPKYNNAIHAAYTIVKEEGVSALYRGVSLTAARQATNQGANFTVYSKLKE 201          

HSP 2 Score: 39.2762 bits (90), Expect = 3.459e-14
Identity = 20/53 (37.74%), Postives = 33/53 (62.26%), Query Frame = 1
Query:  172 ICTIPLDTAKVRLQLQKKPVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGI 330
            +C  PLDT KVR+Q+ ++     G+   K  G + T  TI ++EG ++L+KG+
Sbjct:   26 LCCHPLDTIKVRMQIYRRVA---GIEHVKPPGFIKTGRTIYQKEGFLALYKGL 75          
The following BLAST results are available for this feature:
BLAST of EY739373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
KMCP1_RAT9.648e-1934.78Kidney mitochondrial carrier protein 1 OS=Rattus n... [more]
DIC_HUMAN1.632e-1835.64Mitochondrial dicarboxylate carrier OS=Homo sapien... [more]
DIC_MOUSE2.760e-1836.54Mitochondrial dicarboxylate carrier OS=Mus musculu... [more]
S2534_MOUSE2.248e-1738.37Solute carrier family 25 member 34 OS=Mus musculus... [more]
S2534_RAT6.421e-1738.37Solute carrier family 25 member 34 OS=Rattus norve... [more]
M2OM_NEUCR3.094e-1633.04Putative mitochondrial 2-oxoglutarate/malate carri... [more]
S2534_HUMAN6.810e-1635.16Solute carrier family 25 member 34 OS=Homo sapiens... [more]
S2534_BOVIN1.495e-1538.37Solute carrier family 25 member 34 OS=Bos taurus G... [more]
S2534_DANRE1.578e-1433.98Solute carrier family 25 member 34 OS=Danio rerio ... [more]
SFC1_YEAST3.459e-1435.42Succinate/fumarate mitochondrial transporter OS=Sa... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-056-E08-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY739373 ID=EY739373; Name=EY739373; organism=Citrus sinensis; type=EST; length=831bp
CACGCGTCCGCGGACGCGTGGGTAAAAATCTCAGCTTTCCTCTTTGTTTC
GCTATAAAGATTACGCTCGTTTCTTTGCCTTAAAAACATGGTGGCCGATT
CCAAGGCTAAATCTGACATCTCTTTAGCCGGAACTTTCGCCAGCAGCGCT
TTTGCCGCTTGCTTTGCCGAGATTTGTACTATTCCTTTGGACACTGCTAA
AGTTAGGCTTCAGCTGCAAAAGAAACCTGTCGCGGGGGATGGAGTGGCGT
TGCCAAAGTACAAGGGTATGTTGGGTACAGTTGCCACCATAGCTAGGGAA
GAAGGTATGGTGTCTCTCTGGAAAGGCATTGTTCCAGGATTACATCGTCA
ATGCTTATTTGGAGGGTTAAGGATTGGATTGTATGAGCCTGTGAAGACTG
TATGTGGGCAAGGACTTTGTTGGAGACGTTCCTTTAAGCAAGAAAATACT
TGCAGGACTTACAACTGGTGCTCTCGGGATCATGATCGCAAATCCAACTG
ATCTTGTGAAAGTCAGACTTCAAGCTGAAGGAAAATTGCCTCCTGGTGTA
CCGAGGCGATACAGTGGAGCGTTGAATGCTTATTCCACAATTGTGAAACA
GGAAGGATTTGCGGCTCTTTGGACTGGAGTTGGACCCAATGTTGCACGAA
ATGCTATCATAAATGCTGCTGAACTGGCTAGCTATGATCAAGTGAAGCAG
ACAATTTGGAAAATTCCAGGTTCACAGATAACGTCGTCACTCATCTCCTT
TCTGGTCTGGGAACCTGTTTTGGTCCGTGTTGTATTGGTCCCCCTGTGAT
GTGGGTCAATCCAAGAATAAGGGGGAGCCTG
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