EY739373

Overview
NameEY739373
Unique NameEY739373
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length831
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2877 contig Csv1_Contig2877:70..903. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY739373 vs. ExPASy Swiss-Prot
Match: DIC1_CANGA (Mitochondrial dicarboxylate transporter OS=Candida glabrata GN=DIC1 PE=3 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 9.881e-14
Identity = 34/107 (31.78%), Postives = 57/107 (53.27%), Query Frame = 2
Query:  452 AGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYSTIVKQEGFAALW-TGVGPNVARNAIINAAELASYDQVKQTIW-------KIPGSQITSSLIS 748
            A + +GALG +  N  DL+ +R+Q +  LP    R Y  A++    I K EG  +L+ TG  PN+ R  ++ A+++ +YD  K  +        K   + +TSSL++
Sbjct:  104 ASMVSGALGGLAGNFADLINIRMQNDSALPLDKRRNYKNAIDGMVKIYKAEGAKSLFLTGWKPNMVRGVLMTASQVVTYDMFKNFLVTKYNMDPKKNSTHLTSSLLA 210          

HSP 2 Score: 40.817 bits (94), Expect = 9.881e-14
Identity = 25/73 (34.25%), Postives = 38/73 (52.05%), Query Frame = 1
Query:  178 TIPLDTAKVRLQLQKKPVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVK 396
            T PLD  KVRLQ            +PK   ++  + +I + EG+V L+ G+   L RQC +   R G+Y+ +K
Sbjct:   24 THPLDLTKVRLQ---------AAPIPK-PTIVQMLRSILKNEGIVGLYAGLSASLLRQCTYTTARFGMYDALK 86          
BLAST of EY739373 vs. ExPASy Swiss-Prot
Match: TPC1_ASPNC (Mitochondrial thiamine pyrophosphate carrier 1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=tpc1 PE=3 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 4.735e-13
Identity = 30/83 (36.14%), Postives = 40/83 (48.19%), Query Frame = 1
Query:  175 CTIPLDTAKVRLQLQ----KKPVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTVCGQ 411
            C  PLD  K+RLQLQ      P++   V  P YKG L T+  I R+EG+  LWKG +P       +G ++   Y        Q
Sbjct:   31 CVAPLDVVKIRLQLQIHSLSDPISHRDVTGPIYKGTLSTMRDIIRQEGITGLWKGNIPAELMYVCYGVIQFSAYRTTTQALAQ 113          

HSP 2 Score: 38.5058 bits (88), Expect = 4.735e-13
Identity = 22/89 (24.72%), Postives = 40/89 (44.94%), Query Frame = 2
Query:  431 PLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVK 697
            P ++  +AG T G L      P DL++ R  A+     G  R Y+  +++   I + EG+A  + G    V +         A+Y+ ++
Sbjct:  121 PSAESFVAGATAGGLATASTYPLDLLRTRFAAQ-----GTDRVYTSLMSSVRDIARNEGYAGFFRGCSAAVGQIVPYMGLFFATYEALR 204          
BLAST of EY739373 vs. ExPASy Swiss-Prot
Match: TPC1_PHANO (Mitochondrial thiamine pyrophosphate carrier 1 OS=Phaeosphaeria nodorum GN=TPC1 PE=3 SV=3)

HSP 1 Score: 56.225 bits (134), Expect = 7.988e-13
Identity = 29/71 (40.85%), Postives = 40/71 (56.34%), Query Frame = 1
Query:  184 PLDTAKVRLQLQ----KKPVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLY 384
            PLD  K+RLQLQ     +P +  G+  P YKG LGT+  I R+EG+  LWKG +P       +G ++   Y
Sbjct:   34 PLDVIKIRLQLQIHSLSEPTSYRGLNGPVYKGTLGTLKQILRDEGVTGLWKGNIPAELLYLTYGSVQFSAY 104          

HSP 2 Score: 38.5058 bits (88), Expect = 7.988e-13
Identity = 23/94 (24.47%), Postives = 42/94 (44.68%), Query Frame = 2
Query:  437 SKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVKQTIWKIP 718
            +   ++G   GA    +  P DL++ R  A+GK      R Y+  + +  +I + EG    + G+G  V++         ASY+ +K  +   P
Sbjct:  124 ANSFISGAGAGAAATTVTYPLDLLRTRFAAQGK-----DRVYTSIVASLKSIAQHEGPTGFFRGLGAGVSQIVPYMGLFFASYESLKPVMADSP 212          
BLAST of EY739373 vs. ExPASy Swiss-Prot
Match: OAC1_YEAST (Mitochondrial oxaloacetate transport protein OS=Saccharomyces cerevisiae GN=OAC1 PE=1 SV=1)

HSP 1 Score: 49.6766 bits (117), Expect = 2.271e-12
Identity = 32/108 (29.63%), Postives = 52/108 (48.15%), Query Frame = 2
Query:  446 ILAGLTTGALGIMIANPTDLVKVRLQAEGK-LPPGVPRRYSGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVKQTIWKI------PGSQITSSLIS 748
            + +G  +G +G +I +P  LVK RLQ+  + +  G    Y+G  N   TI K EG   L+ G+   + R    ++ +L  Y+  K  + K       P   +T+S IS
Sbjct:  132 VFSGAASGIIGAVIGSPLFLVKTRLQSYSEFIKIGEQTHYTGVWNGLVTIFKTEGVKGLFRGIDAAILRTGAGSSVQLPIYNTAKNILVKNDLMKDGPALHLTASTIS 239          

HSP 2 Score: 43.5134 bits (101), Expect = 2.271e-12
Identity = 26/78 (33.33%), Postives = 40/78 (51.28%), Query Frame = 1
Query:  178 TIPLDTAKVRLQLQKKPVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTVCGQ 411
            T P++  K+R+QLQ +  A    A   YK  +  +A I + EG+  L KG+      Q    G R+G YEP+++   Q
Sbjct:   40 TNPIELIKIRMQLQGEMSAS---AAKVYKNPIQGMAVIFKNEGIKGLQKGLNAAYIYQIGLNGSRLGFYEPIRSSLNQ 114          
BLAST of EY739373 vs. ExPASy Swiss-Prot
Match: YIA6_YEAST (Uncharacterized mitochondrial carrier YIL006W OS=Saccharomyces cerevisiae GN=YIL006W PE=1 SV=1)

HSP 1 Score: 48.1358 bits (113), Expect = 3.812e-12
Identity = 24/55 (43.64%), Postives = 34/55 (61.82%), Query Frame = 1
Query:  172 ICTIPLDTAKVRLQLQKKPVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVP 336
            +   PLD AK RLQ Q      +    P Y+G++GT++TI R+EG   L+KG+VP
Sbjct:   93 VAVCPLDVAKTRLQAQGLQTRFEN---PYYRGIMGTLSTIVRDEGPRGLYKGLVP 144          

HSP 2 Score: 44.2838 bits (103), Expect = 3.812e-12
Identity = 23/64 (35.94%), Postives = 34/64 (53.12%), Query Frame = 2
Query:  452 AGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYSTIVKQEGFAALWTGVGPNV 643
            A +T GA    + NP  +VK RL  +  L    P  Y G  +A+  +  QEGF AL+ G+ P++
Sbjct:  182 AAITAGAASTTLTNPIWVVKTRLMLQSNLGEH-PTHYKGTFDAFRKLFYQEGFKALYAGLVPSL 244          
BLAST of EY739373 vs. ExPASy Swiss-Prot
Match: TPC1_ASPFU (Mitochondrial thiamine pyrophosphate carrier 1 OS=Aspergillus fumigatus GN=tpc1 PE=3 SV=3)

HSP 1 Score: 59.6918 bits (143), Expect = 4.977e-12
Identity = 31/83 (37.35%), Postives = 41/83 (49.40%), Query Frame = 1
Query:  175 CTIPLDTAKVRLQLQ----KKPVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTVCGQ 411
            C  PLD  K+RLQLQ      P +   V  P YKG L T+ TI ++EG+  LWKG +P       +G L+   Y     +  Q
Sbjct:   31 CVAPLDVVKIRLQLQIHSLSDPASHHDVVGPIYKGTLSTMRTIIKQEGITGLWKGNIPAELMYVCYGALQFTAYRTTTQILAQ 113          

HSP 2 Score: 32.3426 bits (72), Expect = 4.977e-12
Identity = 21/92 (22.83%), Postives = 37/92 (40.22%), Query Frame = 2
Query:  431 PLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVKQTI 706
            P  +  ++G   G L      P DL++ R  A+     G  R Y+  L +   I + EG A  + G    V +         A+Y+ ++  +
Sbjct:  121 PALESFVSGAVAGGLATASTYPLDLLRTRFAAQ-----GTERIYTSLLASVRDIARSEGPAGFFRGCSAAVGQIVPYMGLFFATYESLRPVL 207          
BLAST of EY739373 vs. ExPASy Swiss-Prot
Match: TPC1_EMENI (Mitochondrial thiamine pyrophosphate carrier 1 OS=Emericella nidulans GN=tpc1 PE=3 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 6.454e-12
Identity = 32/83 (38.55%), Postives = 42/83 (50.60%), Query Frame = 1
Query:  175 CTIPLDTAKVRLQLQ----KKPVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTVCGQ 411
            C  PLD  K+RLQLQ      P +   +  P YKG L T+ TI REEG+  LWKG +P       +GG++   Y     +  Q
Sbjct:   31 CIAPLDVVKIRLQLQIHSLSDPTSHAHITGPVYKGTLSTIKTILREEGLTGLWKGNIPAELLYVCYGGIQFTTYRTTTQLLAQ 113          

HSP 2 Score: 29.261 bits (64), Expect = 6.454e-12
Identity = 20/93 (21.51%), Postives = 35/93 (37.63%), Query Frame = 2
Query:  440 KKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVKQTIWKIP 718
            +  ++G   G +      P DL++ R  A+G    G  R Y     +   I K EG    + G    V +         A+Y+ ++  +   P
Sbjct:  124 ESFISGALGGGIATAATYPLDLLRTRFAAQGS---GDNRVYESLFASLRDIAKTEGTVGFFRGCSAAVGQIVPYMGLFFATYEALRPVMATAP 213          
BLAST of EY739373 vs. ExPASy Swiss-Prot
Match: TPC1_ASPOR (Mitochondrial thiamine pyrophosphate carrier 1 OS=Aspergillus oryzae GN=tpc1 PE=3 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 8.390e-12
Identity = 30/83 (36.14%), Postives = 40/83 (48.19%), Query Frame = 1
Query:  175 CTIPLDTAKVRLQLQ----KKPVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTVCGQ 411
            C  PLD  K+RLQLQ      P +   +  P YKG L T+ +I REEG+  LWKG +P       +G ++   Y        Q
Sbjct:   31 CVAPLDVVKIRLQLQIHSLSDPTSHQNIKGPVYKGTLPTIRSIVREEGITGLWKGNIPAELMYVCYGAIQFAAYRTTTQALSQ 113          

HSP 2 Score: 31.187 bits (69), Expect = 8.390e-12
Identity = 21/89 (23.60%), Postives = 36/89 (40.45%), Query Frame = 2
Query:  431 PLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVK 697
            P ++  +AG T G L      P DL++ R  A+     G  R Y+    +   I + EG    + G    V +         A+Y+ ++
Sbjct:  121 PPAESFVAGATAGGLATASTYPLDLLRTRFAAQ-----GTERVYTSLYASVRDIAQNEGPKGFFRGCSAAVGQIVPYMGLFFATYESLR 204          
BLAST of EY739373 vs. ExPASy Swiss-Prot
Match: TPC1_ASPTN (Mitochondrial thiamine pyrophosphate carrier 1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=tpc1 PE=3 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 1.089e-11
Identity = 31/83 (37.35%), Postives = 41/83 (49.40%), Query Frame = 1
Query:  175 CTIPLDTAKVRLQLQ----KKPVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTVCGQ 411
            C  PLD  K+RLQLQ      P +   V+ P YKG + T+  I REEG+  LWKG +P       +GG++   Y        Q
Sbjct:   31 CVAPLDVVKIRLQLQIHSLSDPSSHRNVSGPIYKGTISTMRAIIREEGITGLWKGNIPAELMYVCYGGVQFTTYRTTTQALAQ 113          

HSP 2 Score: 31.9574 bits (71), Expect = 1.089e-11
Identity = 21/89 (23.60%), Postives = 38/89 (42.70%), Query Frame = 2
Query:  440 KKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVKQTI 706
            +  +AG + G L      P DL++ R  A+     G  R Y+  L +   I + EG A  + G    V +         A+Y+ ++ ++
Sbjct:  123 ESFVAGASAGGLATAATYPLDLLRTRFAAQ-----GTERVYTSLLASVRDIARIEGPAGFFRGCSAAVGQIVPYMGLFFATYESLRPSL 206          
BLAST of EY739373 vs. ExPASy Swiss-Prot
Match: TPC1_NEOFI (Mitochondrial thiamine pyrophosphate carrier 1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=tpc1 PE=3 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 1.414e-11
Identity = 31/83 (37.35%), Postives = 40/83 (48.19%), Query Frame = 1
Query:  175 CTIPLDTAKVRLQLQ----KKPVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGGLRIGLYEPVKTVCGQ 411
            C  PLD  K+RLQLQ      P +   V  P YKG L T+  I ++EG+  LWKG +P       +G L+   Y     V  Q
Sbjct:   31 CVAPLDVVKIRLQLQIHSLSDPASHRDVVGPIYKGTLSTMRAIIKQEGITGLWKGNIPAELMYVCYGALQFTAYRTTTQVLAQ 113          

HSP 2 Score: 32.7278 bits (73), Expect = 1.414e-11
Identity = 21/92 (22.83%), Postives = 37/92 (40.22%), Query Frame = 2
Query:  431 PLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVKQTI 706
            P  +  ++G   G L      P DL++ R  A+     G  R Y+  L +   I + EG A  + G    V +         A+Y+ ++  +
Sbjct:  121 PALESFVSGAVAGGLATASTYPLDLLRTRFAAQ-----GTERIYTSLLASVQDIARNEGPAGFFRGCSAAVGQIVPYMGLFFATYESLRPVL 207          
The following BLAST results are available for this feature:
BLAST of EY739373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
DIC1_CANGA9.881e-1431.78Mitochondrial dicarboxylate transporter OS=Candida... [more]
TPC1_ASPNC4.735e-1336.14Mitochondrial thiamine pyrophosphate carrier 1 OS=... [more]
TPC1_PHANO7.988e-1340.85Mitochondrial thiamine pyrophosphate carrier 1 OS=... [more]
OAC1_YEAST2.271e-1229.63Mitochondrial oxaloacetate transport protein OS=Sa... [more]
YIA6_YEAST3.812e-1243.64Uncharacterized mitochondrial carrier YIL006W OS=S... [more]
TPC1_ASPFU4.977e-1237.35Mitochondrial thiamine pyrophosphate carrier 1 OS=... [more]
TPC1_EMENI6.454e-1238.55Mitochondrial thiamine pyrophosphate carrier 1 OS=... [more]
TPC1_ASPOR8.390e-1236.14Mitochondrial thiamine pyrophosphate carrier 1 OS=... [more]
TPC1_ASPTN1.089e-1137.35Mitochondrial thiamine pyrophosphate carrier 1 OS=... [more]
TPC1_NEOFI1.414e-1137.35Mitochondrial thiamine pyrophosphate carrier 1 OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-056-E08-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY739373 ID=EY739373; Name=EY739373; organism=Citrus sinensis; type=EST; length=831bp
CACGCGTCCGCGGACGCGTGGGTAAAAATCTCAGCTTTCCTCTTTGTTTC
GCTATAAAGATTACGCTCGTTTCTTTGCCTTAAAAACATGGTGGCCGATT
CCAAGGCTAAATCTGACATCTCTTTAGCCGGAACTTTCGCCAGCAGCGCT
TTTGCCGCTTGCTTTGCCGAGATTTGTACTATTCCTTTGGACACTGCTAA
AGTTAGGCTTCAGCTGCAAAAGAAACCTGTCGCGGGGGATGGAGTGGCGT
TGCCAAAGTACAAGGGTATGTTGGGTACAGTTGCCACCATAGCTAGGGAA
GAAGGTATGGTGTCTCTCTGGAAAGGCATTGTTCCAGGATTACATCGTCA
ATGCTTATTTGGAGGGTTAAGGATTGGATTGTATGAGCCTGTGAAGACTG
TATGTGGGCAAGGACTTTGTTGGAGACGTTCCTTTAAGCAAGAAAATACT
TGCAGGACTTACAACTGGTGCTCTCGGGATCATGATCGCAAATCCAACTG
ATCTTGTGAAAGTCAGACTTCAAGCTGAAGGAAAATTGCCTCCTGGTGTA
CCGAGGCGATACAGTGGAGCGTTGAATGCTTATTCCACAATTGTGAAACA
GGAAGGATTTGCGGCTCTTTGGACTGGAGTTGGACCCAATGTTGCACGAA
ATGCTATCATAAATGCTGCTGAACTGGCTAGCTATGATCAAGTGAAGCAG
ACAATTTGGAAAATTCCAGGTTCACAGATAACGTCGTCACTCATCTCCTT
TCTGGTCTGGGAACCTGTTTTGGTCCGTGTTGTATTGGTCCCCCTGTGAT
GTGGGTCAATCCAAGAATAAGGGGGAGCCTG
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