EY736446

Overview
NameEY736446
Unique NameEY736446
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length787
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_HAES2 (Nucleoside diphosphate kinase OS=Haemophilus somnus (strain 2336) GN=ndk PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.478e-17
Identity = 40/95 (42.11%), Postives = 67/95 (70.53%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            E+TLA+IKPD +  N    I   + + GF I+  +++ L+++ A+ FYAEH +++FF+ L+KYMTS P++ +VL+KENA+ D+R  +G T+ + A
Sbjct:    4 EQTLAIIKPDAVERNLIGNIISRLEDKGFQIIAMKMLHLNQEQAEGFYAEHRNKAFFTELVKYMTSAPIVVLVLQKENAVKDYRTFMGTTNPEIA 98          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_LEPIN (Nucleoside diphosphate kinase OS=Leptospira interrogans GN=ndk PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.521e-17
Identity = 43/103 (41.75%), Postives = 62/103 (60.19%), Query Frame = 2
Query:  182 KTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAXISHPHRLY 490
            +T  MIKPDG+   +   I   I + GF IL  + ++L  + AK FY  HS+R F++ L  YM+SGP++A  LE++NA+  WR +IG TD K+A       LY
Sbjct:    3 RTFIMIKPDGVKNKHVGNILSRIEKEGFKILGLKYLKLSLEDAKQFYKVHSARPFYNDLCNYMSSGPIVAAALERDNAVLHWREVIGATDPKEAAAGTIRALY 105          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_LEPIC (Nucleoside diphosphate kinase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=ndk PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.521e-17
Identity = 43/103 (41.75%), Postives = 62/103 (60.19%), Query Frame = 2
Query:  182 KTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAXISHPHRLY 490
            +T  MIKPDG+   +   I   I + GF IL  + ++L  + AK FY  HS+R F++ L  YM+SGP++A  LE++NA+  WR +IG TD K+A       LY
Sbjct:    3 RTFIMIKPDGVKNKHVGNILSRIEKEGFKILGLKYLKLSLEDAKQFYKVHSARPFYNDLCNYMSSGPIVAAALERDNAVLHWREVIGATDPKEAAAGTIRALY 105          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_HAES1 (Nucleoside diphosphate kinase OS=Haemophilus somnus (strain 129Pt) GN=ndk PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.521e-17
Identity = 40/95 (42.11%), Postives = 66/95 (69.47%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            E+TLA+IKPD +  N    I   + + GF I+  +++ L+++ A+ FY EHS ++FF+ LI+YMTS P++ +VL+KENA+ D+R  +G T+ + A
Sbjct:    4 EQTLAIIKPDAVERNLIGNIISRLEDKGFQIIAMKMLHLNQEQAEGFYTEHSDKAFFAELIRYMTSAPIVVLVLQKENAVKDYRTFMGTTNPEIA 98          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_METNO (Nucleoside diphosphate kinase OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=ndk PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.301e-17
Identity = 43/109 (39.45%), Postives = 66/109 (60.55%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAXISHPHRLYVLPFG 505
            E+T +++KPD  + N T  I  VI E+G  I+ +R +R+ E  AKTFY  H+ R F+  L+ +MTSGPV+  VLE ENA+  +R ++G T+  +A      + + L  G
Sbjct:    4 ERTFSILKPDATARNLTGAINAVIEEAGLRIVAQRRIRMSEAQAKTFYEVHAERPFYGELVSFMTSGPVVVQVLEGENAVAKYREVMGATNPAQAAEGTIRKKFALSVG 112          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_LEPBP (Nucleoside diphosphate kinase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=ndk PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.617e-17
Identity = 40/95 (42.11%), Postives = 62/95 (65.26%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            E+T  M+KPD +   +  +I + I + GF IL  + ++L  + AK FYA H++R F++ L  YM SGP++A  LE++NA+  WR +IG TD K+A
Sbjct:    2 ERTFIMLKPDAVKNKHIGDILQRIEKEGFKILGMKFLKLSLEDAKQFYAVHAARPFYNDLCTYMASGPIVACALERDNAVAHWRDVIGATDPKEA 96          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_LEPBA (Nucleoside diphosphate kinase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=ndk PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.617e-17
Identity = 40/95 (42.11%), Postives = 62/95 (65.26%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            E+T  M+KPD +   +  +I + I + GF IL  + ++L  + AK FYA H++R F++ L  YM SGP++A  LE++NA+  WR +IG TD K+A
Sbjct:    2 ERTFIMLKPDAVKNKHIGDILQRIEKEGFKILGMKFLKLSLEDAKQFYAVHAARPFYNDLCTYMASGPIVACALERDNAVAHWRDVIGATDPKEA 96          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_HAEIG (Nucleoside diphosphate kinase OS=Haemophilus influenzae (strain PittGG) GN=ndk PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.617e-17
Identity = 41/95 (43.16%), Postives = 62/95 (65.26%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            E+T ++IKPD +  N    I     ++GF I+  ++VRL  + A+ FYAEH  + FF+ L++YM S P++  VLEKENA+ D+R LIG T+ + A
Sbjct:    3 ERTFSIIKPDAVKRNLIGAILTRFEQNGFKIIASKMVRLTREQAEGFYAEHQGKEFFAPLVEYMMSSPIVVSVLEKENAVKDYRTLIGTTNPETA 97          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_HAEIE (Nucleoside diphosphate kinase OS=Haemophilus influenzae (strain PittEE) GN=ndk PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.617e-17
Identity = 41/95 (43.16%), Postives = 62/95 (65.26%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            E+T ++IKPD +  N    I     ++GF I+  ++VRL  + A+ FYAEH  + FF+ L++YM S P++  VLEKENA+ D+R LIG T+ + A
Sbjct:    3 ERTFSIIKPDAVKRNLIGAILTRFEQNGFKIIASKMVRLTREQAEGFYAEHQGKEFFAPLVEYMMSSPIVVSVLEKENAVKDYRTLIGTTNPETA 97          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_AZOVD (Nucleoside diphosphate kinase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=ndk PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 9.581e-17
Identity = 45/95 (47.37%), Postives = 61/95 (64.21%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            E+TL++IKPD ++ N   EI     ++G S++  ++V+L E  A  FYAEH  R FF  L+ +MTSGPV+  VLE E AI   R L+G TD KKA
Sbjct:    4 ERTLSIIKPDAVAKNVIGEILTRFEKAGLSVVAAKMVQLSEREAGGFYAEHKERPFFKDLVSFMTSGPVVVQVLEGEGAIAKNRELMGATDPKKA 98          
The following BLAST results are available for this feature:
BLAST of EY736446 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK_HAES21.478e-1742.11Nucleoside diphosphate kinase OS=Haemophilus somnu... [more]
NDK_LEPIN2.521e-1741.75Nucleoside diphosphate kinase OS=Leptospira interr... [more]
NDK_LEPIC2.521e-1741.75Nucleoside diphosphate kinase OS=Leptospira interr... [more]
NDK_HAES12.521e-1742.11Nucleoside diphosphate kinase OS=Haemophilus somnu... [more]
NDK_METNO4.301e-1739.45Nucleoside diphosphate kinase OS=Methylobacterium ... [more]
NDK_LEPBP5.617e-1742.11Nucleoside diphosphate kinase OS=Leptospira biflex... [more]
NDK_LEPBA5.617e-1742.11Nucleoside diphosphate kinase OS=Leptospira biflex... [more]
NDK_HAEIG5.617e-1743.16Nucleoside diphosphate kinase OS=Haemophilus influ... [more]
NDK_HAEIE5.617e-1743.16Nucleoside diphosphate kinase OS=Haemophilus influ... [more]
NDK_AZOVD9.581e-1747.37Nucleoside diphosphate kinase OS=Azotobacter vinel... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-016-D09-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736446 ID=EY736446; Name=EY736446; organism=Citrus sinensis; type=EST; length=787bp
TAGGTCACCACGCGTCCGCTCAAAATTTGGTTTTCATATTTATTTATTTC
TTCATTGCTTCTGTATTAAGGTTTCAACAGTGGGAACTTTTGAAATGATT
CTTCGTGTTGTTGGGCTCTTCATTTTGGCCTGCATCTCTTCTCCCTGCAG
GTCTTTGAGCAATGGAAGTGTGGAAAAGGAGAAAACATTGGCTATGATAA
AGCCTGATGGATTGTCTGGTAACTACACTGATGAAATCAAAAAGGTGATT
CTGGAGTCTGGTTTCAGTATTTTGAGGGAAAGAGTGGTTCGACTTGATGA
GGATGGGGCGAAAACCTTTTACGCTGAGCACTCTTCAAGGAGCTTTTTTT
CTAGTCTTATCAAGTACATGACGAGTGGTCCAGTTTTAGCTATGGTTTTG
GAGAAGGAAAATGCCATTACTGATTGGCGTGCTTTGATTGGACCAACTGA
TGCAAAAAAGGCTANAATTTCTCATCCACACAGGTTATATGTGCTCCCAT
TTGGATAAATGTGTACTTGGTTATTATATAAACAGTTTGTGAGATTGACT
TACCTTTGTCACTGTACTTTTCTTTTGTGGCTGGTGATTTCTTGTCCATG
TTCCCTTGAATACTTCCACCATTAGGGCCATGTTCGGCTTGGATTCAGAA
AACAATTGTGTTCATGGGTTCTGACTCTCCGTGAGCGGCCCGAGGAGAGA
TGTCTTTTTTCTCTCAAGAGGTGTCTGCCCATGAGGTGAGGTGAAACAAT
GACTGGTGGGTGGGAAGCCCTTGAAGAAGAGCATGGG
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