EY736446

Overview
NameEY736446
Unique NameEY736446
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length787
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_METS5 (Nucleoside diphosphate kinase OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=ndk PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.025e-15
Identity = 41/95 (43.16%), Postives = 57/95 (60.00%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            +KT  MIKPDG+      EI   I   G  I   ++V++D + A   Y EH  +SFF+ L+ Y+TSGPV+ MV+E + A+   R LIG TD K+A
Sbjct:    4 QKTFVMIKPDGVRRKLIGEIVGRIERKGLRIAAMKMVKIDRETANKLYEEHIGKSFFNELVSYITSGPVVCMVVEGDEAVRVMRTLIGATDPKEA 98          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_JANMA (Nucleoside diphosphate kinase OS=Janthinobacterium sp. (strain Marseille) GN=ndk PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.025e-15
Identity = 43/95 (45.26%), Postives = 59/95 (62.11%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            E+TL++IKPD ++ N   +I      +G  I+  R+ +L    A+ FYA HS+R FF  L+ +M SGPV+  VLE ENAI   R L+G TD KKA
Sbjct:    4 ERTLSIIKPDAVAKNVIGQIYSRFEGAGLKIVAARMTQLSRAEAEGFYAVHSARPFFKDLVDFMISGPVIIQVLEGENAIIKHRDLMGATDPKKA 98          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_HAHCH (Nucleoside diphosphate kinase OS=Hahella chejuensis (strain KCTC 2396) GN=ndk PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.025e-15
Identity = 41/95 (43.16%), Postives = 61/95 (64.21%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            E+TL++IKPD ++ N   EI     ++G  I+  +++ L ++ A+ FYAEH  R FF  L+ +MTSGPV+   LE ENAI   R L+G T+ K+A
Sbjct:    4 ERTLSIIKPDAVAKNVIGEIYSRFEKAGLRIVAAKMLHLSQEQAEGFYAEHKERGFFPDLVAFMTSGPVVVQALEGENAIALNRQLMGATNPKEA 98          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_BURXL (Nucleoside diphosphate kinase OS=Burkholderia xenovorans (strain LB400) GN=ndk PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.025e-15
Identity = 42/95 (44.21%), Postives = 58/95 (61.05%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            E+TL++IKPD ++ N   +I      +G  I+  R+V L    A+ FYA H++R FF  L+ +M SGPV+   LE ENAI   R L+G TD KKA
Sbjct:    4 ERTLSIIKPDAVAKNVIGQIYTRFENAGLKIVASRMVHLSRADAEKFYAVHAARPFFKDLVDFMISGPVVVQALEGENAILKHRDLMGATDPKKA 98          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_WOLWR (Nucleoside diphosphate kinase OS=Wolbachia sp. subsp. Drosophila simulans (strain wRi) GN=ndk PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.257e-15
Identity = 38/95 (40.00%), Postives = 61/95 (64.21%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            EKTL+++KPD +  N T +I   I  SG  I+ ++++ L +  A+ FY  H  R FF  L+++MTSG V+  VL  ENA++ +R ++G T+ K+A
Sbjct:    4 EKTLSILKPDAVKNNITGKINSYIESSGLKIIAQKMMLLTKKQAELFYEIHKDRPFFGELVEFMTSGSVIVQVLVGENAVSKYRQIMGATNPKQA 98          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_VEREI (Nucleoside diphosphate kinase OS=Verminephrobacter eiseniae (strain EF01-2) GN=ndk PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.257e-15
Identity = 42/95 (44.21%), Postives = 58/95 (61.05%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            E+TL++IKPD ++ N   +I      +G  I+  R+V L    A+ FYA H  R FF  L+++M SGPV+  VLE ENA+   R L+G TD KKA
Sbjct:    4 ERTLSIIKPDAVAKNVIGQIYARFEAAGLKIVAARMVHLARPEAERFYAVHKERPFFKDLVEFMISGPVMVQVLEGENAVLKNRELMGATDPKKA 98          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_SULTO (Nucleoside diphosphate kinase OS=Sulfolobus tokodaii GN=ndk PE=3 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 5.257e-15
Identity = 40/95 (42.11%), Postives = 59/95 (62.11%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            ++T  MIKPDG+  N   EI     + G  I+  ++V++D   A+  Y EH  +SFF  LI Y+TSGPV+ MV+E + A++  R +IG TD K+A
Sbjct:    4 QRTFVMIKPDGVRRNLIGEIISRFEKRGLKIIGLKMVKIDRPTAERLYEEHKGKSFFEELISYITSGPVVCMVIEGDEAVSVVRKMIGNTDPKEA 98          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_SHELP (Nucleoside diphosphate kinase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=ndk PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.257e-15
Identity = 38/95 (40.00%), Postives = 62/95 (65.26%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            E+T ++IKPD ++ N+   I      +G  I+  ++V L ++ A+ FYAEHS R FF +L+++MTSGP++  VLE ENA+   R ++G T+  +A
Sbjct:    4 ERTFSIIKPDAVAKNHIGAIYNRFETAGLKIIASKMVHLSKEQAEGFYAEHSERPFFGALVEFMTSGPIMVQVLEGENAVLANREIMGATNPAEA 98          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_RHOP2 (Nucleoside diphosphate kinase OS=Rhodopseudomonas palustris (strain HaA2) GN=ndk PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.257e-15
Identity = 40/109 (36.70%), Postives = 62/109 (56.88%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAXISHPHRLYVLPFG 505
            ++T +++KPD    N T  I  +I ++G  I+ ++ + +    A+TFYA H  R FF  L+ +MTSGPV+  VLE E AI  +R ++G TD  KA      +L+    G
Sbjct:    4 QRTFSILKPDATERNITGAINALIEKAGLRIVAQKRIHMTRGQAETFYAVHKERPFFGELVDFMTSGPVVVQVLEGEGAIAKYRDVMGATDPSKAADGTIRKLHAKSIG 112          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_PSEPW (Nucleoside diphosphate kinase OS=Pseudomonas putida (strain W619) GN=ndk PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.257e-15
Identity = 41/95 (43.16%), Postives = 61/95 (64.21%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            ++T ++IKPD ++ N   +I     E+G  I+  ++ +L +  A+ FYAEHS R FF  L+ +MTSGPV+  VLE ENAI   R L+G T+ K+A
Sbjct:    4 QRTFSIIKPDAVAKNVIGKITTRFEEAGLKIVASKIKQLSKAEAEGFYAEHSERGFFGDLVAFMTSGPVVVQVLEGENAIALNRELMGATNPKEA 98          
The following BLAST results are available for this feature:
BLAST of EY736446 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK_METS54.025e-1543.16Nucleoside diphosphate kinase OS=Metallosphaera se... [more]
NDK_JANMA4.025e-1545.26Nucleoside diphosphate kinase OS=Janthinobacterium... [more]
NDK_HAHCH4.025e-1543.16Nucleoside diphosphate kinase OS=Hahella chejuensi... [more]
NDK_BURXL4.025e-1544.21Nucleoside diphosphate kinase OS=Burkholderia xeno... [more]
NDK_WOLWR5.257e-1540.00Nucleoside diphosphate kinase OS=Wolbachia sp. sub... [more]
NDK_VEREI5.257e-1544.21Nucleoside diphosphate kinase OS=Verminephrobacter... [more]
NDK_SULTO5.257e-1542.11Nucleoside diphosphate kinase OS=Sulfolobus tokoda... [more]
NDK_SHELP5.257e-1540.00Nucleoside diphosphate kinase OS=Shewanella loihic... [more]
NDK_RHOP25.257e-1536.70Nucleoside diphosphate kinase OS=Rhodopseudomonas ... [more]
NDK_PSEPW5.257e-1543.16Nucleoside diphosphate kinase OS=Pseudomonas putid... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-016-D09-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736446 ID=EY736446; Name=EY736446; organism=Citrus sinensis; type=EST; length=787bp
TAGGTCACCACGCGTCCGCTCAAAATTTGGTTTTCATATTTATTTATTTC
TTCATTGCTTCTGTATTAAGGTTTCAACAGTGGGAACTTTTGAAATGATT
CTTCGTGTTGTTGGGCTCTTCATTTTGGCCTGCATCTCTTCTCCCTGCAG
GTCTTTGAGCAATGGAAGTGTGGAAAAGGAGAAAACATTGGCTATGATAA
AGCCTGATGGATTGTCTGGTAACTACACTGATGAAATCAAAAAGGTGATT
CTGGAGTCTGGTTTCAGTATTTTGAGGGAAAGAGTGGTTCGACTTGATGA
GGATGGGGCGAAAACCTTTTACGCTGAGCACTCTTCAAGGAGCTTTTTTT
CTAGTCTTATCAAGTACATGACGAGTGGTCCAGTTTTAGCTATGGTTTTG
GAGAAGGAAAATGCCATTACTGATTGGCGTGCTTTGATTGGACCAACTGA
TGCAAAAAAGGCTANAATTTCTCATCCACACAGGTTATATGTGCTCCCAT
TTGGATAAATGTGTACTTGGTTATTATATAAACAGTTTGTGAGATTGACT
TACCTTTGTCACTGTACTTTTCTTTTGTGGCTGGTGATTTCTTGTCCATG
TTCCCTTGAATACTTCCACCATTAGGGCCATGTTCGGCTTGGATTCAGAA
AACAATTGTGTTCATGGGTTCTGACTCTCCGTGAGCGGCCCGAGGAGAGA
TGTCTTTTTTCTCTCAAGAGGTGTCTGCCCATGAGGTGAGGTGAAACAAT
GACTGGTGGGTGGGAAGCCCTTGAAGAAGAGCATGGG
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