EY736446

Overview
NameEY736446
Unique NameEY736446
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length787
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_METSB (Nucleoside diphosphate kinase OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=ndk PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.257e-15
Identity = 43/109 (39.45%), Postives = 63/109 (57.80%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAXISHPHRLYVLPFG 505
            E+T ++IKPD    N T  I  +I ++G  I+ ++ V++    A+TFYA H  R FF +L+  M SGPV+  VLE ENAI  +R ++G TD  KA      + + L  G
Sbjct:    4 ERTFSIIKPDATRRNLTGAINALIEKAGLRIIAQKRVQITRPQAETFYAVHKERPFFGALVDTMISGPVVVQVLEGENAIKAYRDVLGATDPAKAAPGTIRKEFALSVG 112          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_IGNH4 (Nucleoside diphosphate kinase OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=ndk PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.257e-15
Identity = 41/95 (43.16%), Postives = 56/95 (58.95%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            E+   MIKPDG+      EI   I   G  I+  ++++LD + A+  Y EH  + FF  LI Y+TSGPV+AMV+E  NA+   R +IG TD  KA
Sbjct:    2 EREFVMIKPDGVKRGLVGEIISRIERKGLKIVAMKMLKLDREMAERLYEEHKGKPFFDDLISYVTSGPVVAMVVEGPNAVEVMRRMIGDTDGAKA 96          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_AZOSE (Nucleoside diphosphate kinase OS=Azoarcus sp. (strain EbN1) GN=ndk PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.257e-15
Identity = 42/95 (44.21%), Postives = 59/95 (62.11%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            E+TL++IKPD ++ N   +I +   ++G  I+  ++V L E  A  FYA H  R FF  L+ +M SGPV+  VLE E+AI   R L+G TD KKA
Sbjct:    4 ERTLSIIKPDAVAKNVIGKIYQRFEDAGLKIIASKMVHLSEREAGQFYAVHKERPFFKDLVSFMISGPVMIQVLEGESAIATNRDLMGATDPKKA 98          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_ALISL (Nucleoside diphosphate kinase OS=Aliivibrio salmonicida (strain LFI1238) GN=ndk PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.257e-15
Identity = 37/95 (38.95%), Postives = 63/95 (66.32%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            E+T +++KPD +  N    I + I ++G  ++  +++ L ++ A+ FYAEH  + FF +L++YMTSGPV+  VLE E+ IT +R L+G T+  +A
Sbjct:    4 ERTFSIVKPDAVKRNLIGAIYRRIEKTGMQVVAAKMLSLTKEQAQGFYAEHEGKEFFDALVEYMTSGPVMVQVLEGESVITRYRELMGKTNPDEA 98          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: TXND3_CIOIN (Thioredoxin domain-containing protein 3 homolog OS=Ciona intestinalis GN=CiIC3 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 5.639e-15
Identity = 43/112 (38.39%), Postives = 59/112 (52.68%), Query Frame = 2
Query:  164 GSVEKEKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEK----ENAITDWRALIGPTDAKKAXISHPHRL 487
            G V K+ T+A+IKPD +     DEI + I E+G  +L +    L  + A+ FY       +F  LI Y+TSGP   +VL K    E  +T WR +IGP DA  A   +P  L
Sbjct:  151 GVVSKQITVALIKPDVVQNGQVDEILQKISEAGIEVLADEERMLTVEEARDFYKNKEEEEYFDQLIDYVTSGPCRVLVLTKGESGEGVVTLWRDIIGPFDAAVAKEENPDSL 262          

HSP 2 Score: 25.409 bits (54), Expect = 5.639e-15
Identity = 8/20 (40.00%), Postives = 15/20 (75.00%), Query Frame = 3
Query:  609 NTSTIRAMFGLDSENNCVHG 668
            N  ++RA++G D+ +N +HG
Sbjct:  258 NPDSLRAIYGTDATSNALHG 277          

HSP 3 Score: 78.9518 bits (193), Expect = 3.408e-14
Identity = 39/103 (37.86%), Postives = 62/103 (60.19%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAXISHPHRL 487
            ++TLA+I+PD L   + D I + I E+GF I  ++ + L  + A++FY+EH    +F  L+K MT GPVLA+ L  ++A+  WR+++GP     A    P  L
Sbjct:  325 QRTLAIIRPDALQA-HKDSILQKIDEAGFKIAMQKEMVLTREQAESFYSEHKDTDYFEPLVKQMTCGPVLALCLAHDDAVDHWRSMLGPKVVADAVEEQPDSL 426          

HSP 4 Score: 73.9442 bits (180), Expect = 1.096e-12
Identity = 40/103 (38.83%), Postives = 59/103 (57.28%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAXISHPHRL 487
            E+TLA+IKPD +     ++I   + E+GF I  ++ + L ++ A   Y       ++  LI +MTSGP L MVL  ENA+   R ++GPTD + A  SHP  L
Sbjct:  460 EQTLAVIKPDAIDEK--EQIMGKLKEAGFMISCQKDMNLSKEIASEIYKSKEGSEYYDHLIDHMTSGPTLMMVLSAENAVEKLRDIMGPTDPEVAKESHPESL 560          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_WOLPM (Nucleoside diphosphate kinase OS=Wolbachia pipientis wMel GN=ndk PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.866e-15
Identity = 38/95 (40.00%), Postives = 60/95 (63.16%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            E+TL+++KPD +  N T  I   I +SG  I  ++++ L +  A+ FY  H  R FF  L+++MTSG V+  VL  ENA++ +R ++G TD K+A
Sbjct:    4 ERTLSILKPDAVKNNITGNINSYIEQSGLKITAQKMMLLTKKQAELFYEIHKDRPFFGELVEFMTSGSVVVQVLVGENAVSKYRQIMGATDPKQA 98          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_THICR (Nucleoside diphosphate kinase OS=Thiomicrospira crunogena (strain XCL-2) GN=ndk PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.866e-15
Identity = 39/106 (36.79%), Postives = 63/106 (59.43%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAXISHPHRLYVL 496
            E+T ++IKPD +  N   +I   + ++G  ++  ++V L    AK FYAEH  + FF +LIK MT+GP++  VLE ++AI   R ++GPTD + A      + Y +
Sbjct:    3 ERTFSIIKPDAVKRNLIGQIVSKLEQNGLKVIASKMVFLTVQEAKGFYAEHDGKPFFDTLIKNMTAGPIVVQVLEGDDAIAKNREIMGPTDPENAPAGSIRKEYAI 108          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_SALRD (Nucleoside diphosphate kinase OS=Salinibacter ruber (strain DSM 13855) GN=ndk PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.866e-15
Identity = 39/95 (41.05%), Postives = 61/95 (64.21%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            E+TLA++KPD +      E+ + I ++GF +   +++ + +  A+ FYA H  + FF  L  +M+SGP + +VLEKENAI D+R LIG TD  +A
Sbjct:    4 ERTLAILKPDCVRKEKVGEVLRRIQDAGFQLCAMKMITMSKAEAEGFYAVHEDKPFFDDLTDFMSSGPCVPVVLEKENAIADFRELIGATDPDEA 98          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_PHOPR (Nucleoside diphosphate kinase OS=Photobacterium profundum GN=ndk PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.866e-15
Identity = 40/95 (42.11%), Postives = 60/95 (63.16%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            EKT ++IKPD +  N    I +    +G  I+  ++V LD   A+ FYAEH  + FF+ L+++MTSGPV+  VLE E+AI  +R L+G T+ + A
Sbjct:    4 EKTFSIIKPDAVKRNLIGAIYQRFENAGLKIVASKMVHLDATKAQGFYAEHEEKPFFNELVEFMTSGPVMVQVLEGEDAIHRYRELMGTTNPENA 98          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_DESVM (Nucleoside diphosphate kinase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=ndk PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.866e-15
Identity = 40/95 (42.11%), Postives = 59/95 (62.11%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            E+T ++IKPD +  N +  I K+I +SG  ++  +++ L    A+ FYA H  R FF SL+ YM SGPV+  VLE +NAI  +R L+G T+   A
Sbjct:    3 ERTFSIIKPDAVERNLSGAILKMIQDSGLKVVAMKMIHLTRSQAEGFYAVHRERPFFDSLVTYMCSGPVVCSVLEGDNAIQRYRDLMGATNPANA 97          
The following BLAST results are available for this feature:
BLAST of EY736446 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK_METSB5.257e-1539.45Nucleoside diphosphate kinase OS=Methylocella silv... [more]
NDK_IGNH45.257e-1543.16Nucleoside diphosphate kinase OS=Ignicoccus hospit... [more]
NDK_AZOSE5.257e-1544.21Nucleoside diphosphate kinase OS=Azoarcus sp. (str... [more]
NDK_ALISL5.257e-1538.95Nucleoside diphosphate kinase OS=Aliivibrio salmon... [more]
TXND3_CIOIN5.639e-1538.39Thioredoxin domain-containing protein 3 homolog OS... [more]
NDK_WOLPM6.866e-1540.00Nucleoside diphosphate kinase OS=Wolbachia pipient... [more]
NDK_THICR6.866e-1536.79Nucleoside diphosphate kinase OS=Thiomicrospira cr... [more]
NDK_SALRD6.866e-1541.05Nucleoside diphosphate kinase OS=Salinibacter rube... [more]
NDK_PHOPR6.866e-1542.11Nucleoside diphosphate kinase OS=Photobacterium pr... [more]
NDK_DESVM6.866e-1542.11Nucleoside diphosphate kinase OS=Desulfovibrio vul... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-016-D09-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736446 ID=EY736446; Name=EY736446; organism=Citrus sinensis; type=EST; length=787bp
TAGGTCACCACGCGTCCGCTCAAAATTTGGTTTTCATATTTATTTATTTC
TTCATTGCTTCTGTATTAAGGTTTCAACAGTGGGAACTTTTGAAATGATT
CTTCGTGTTGTTGGGCTCTTCATTTTGGCCTGCATCTCTTCTCCCTGCAG
GTCTTTGAGCAATGGAAGTGTGGAAAAGGAGAAAACATTGGCTATGATAA
AGCCTGATGGATTGTCTGGTAACTACACTGATGAAATCAAAAAGGTGATT
CTGGAGTCTGGTTTCAGTATTTTGAGGGAAAGAGTGGTTCGACTTGATGA
GGATGGGGCGAAAACCTTTTACGCTGAGCACTCTTCAAGGAGCTTTTTTT
CTAGTCTTATCAAGTACATGACGAGTGGTCCAGTTTTAGCTATGGTTTTG
GAGAAGGAAAATGCCATTACTGATTGGCGTGCTTTGATTGGACCAACTGA
TGCAAAAAAGGCTANAATTTCTCATCCACACAGGTTATATGTGCTCCCAT
TTGGATAAATGTGTACTTGGTTATTATATAAACAGTTTGTGAGATTGACT
TACCTTTGTCACTGTACTTTTCTTTTGTGGCTGGTGATTTCTTGTCCATG
TTCCCTTGAATACTTCCACCATTAGGGCCATGTTCGGCTTGGATTCAGAA
AACAATTGTGTTCATGGGTTCTGACTCTCCGTGAGCGGCCCGAGGAGAGA
TGTCTTTTTTCTCTCAAGAGGTGTCTGCCCATGAGGTGAGGTGAAACAAT
GACTGGTGGGTGGGAAGCCCTTGAAGAAGAGCATGGG
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