EY736446

Overview
NameEY736446
Unique NameEY736446
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length787
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_DEIRA (Nucleoside diphosphate kinase OS=Deinococcus radiodurans GN=ndk PE=3 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 6.866e-15
Identity = 39/95 (41.05%), Postives = 57/95 (60.00%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            E+T AMIKPDG+    T EI   I   G+ ++  + + +  + A+  Y EH  R FF  L+ ++T GPV+A+ LE ENAI  WRA++G T+   A
Sbjct:    2 ERTFAMIKPDGVRRGLTPEILARIHNKGYRVVGLKQMMMPRETAEQHYGEHRERPFFGELVDFITGGPVVAIALEGENAIAGWRAMMGATNPANA 96          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_DEIDV (Nucleoside diphosphate kinase OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=ndk PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.866e-15
Identity = 39/95 (41.05%), Postives = 57/95 (60.00%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            E+T AMIKPDG+    T EI   I   G+ ++  + + +  + A+  Y EH  R FF  L+ ++T GPV+A+ LE ENAI  WRA++G T+   A
Sbjct:    2 ERTFAMIKPDGVRRGLTPEILARIARKGYRVVGLKQMVIARETAENHYGEHRERPFFGELVDFITGGPVVAIALEGENAIAGWRAMMGATNPANA 96          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_CAMHC (Nucleoside diphosphate kinase OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=ndk PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.866e-15
Identity = 42/95 (44.21%), Postives = 58/95 (61.05%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            ++TL++IKPD +      +I      +G  I   + ++L +  A  FYA H  RSFF+ L+ YMTSGPV+ MVLE ENA+   R L+G TD KKA
Sbjct:    2 QQTLSIIKPDAVEKGVIGKIIDRFESAGLRIAAAKKIKLSKCDASQFYAIHKERSFFNDLVDYMTSGPVVVMVLEGENAVAKNRELMGATDPKKA 96          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_BART1 (Nucleoside diphosphate kinase OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=ndk PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.866e-15
Identity = 42/108 (38.89%), Postives = 65/108 (60.19%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIG---PTDAKKAXISHPHRLYV 493
            E+T +MIKPD    N T  I K++ ++G  ++  + V + +  A+ FYA H  R FFS L+++M+SGP +  VLE ENAI   R ++G   P+DA++  I   H L +
Sbjct:    4 ERTFSMIKPDATRRNLTGAITKMLEDAGLRVIASKRVWMSKREAEKFYAVHKERPFFSELVEFMSSGPTVVQVLEGENAIAKNREVMGATNPSDAEEGTIRKVHALSI 111          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_BARQU (Nucleoside diphosphate kinase OS=Bartonella quintana GN=ndk PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.866e-15
Identity = 43/108 (39.81%), Postives = 64/108 (59.26%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIG---PTDAKKAXISHPHRLYV 493
            E+T +MIKPD    N T  I K++ ++G  ++  + V ++   A+ FYA H  R FFS L+++M+SGP L  VLE ENAI   R ++G   P DA++  I   H L +
Sbjct:    4 ERTFSMIKPDATRRNLTGAITKMLEDAGLRVVASKRVWMNRREAERFYAVHRERPFFSELVEFMSSGPTLVQVLEGENAIAKNREVMGATNPADAQEGTIRKVHALSI 111          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_VIBHB (Nucleoside diphosphate kinase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=ndk PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.968e-15
Identity = 39/95 (41.05%), Postives = 62/95 (65.26%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            E+T +++KPD +  N   EI   I ++G  I+  ++V L E+ A  FYAEH  + FF +L ++MTSGP++  VLE E+AI  +R L+G T+ ++A
Sbjct:    4 ERTFSIVKPDAVERNLIGEIYHRIEKAGLRIVAAKMVHLTEEQASGFYAEHEGKPFFPALKEFMTSGPIMVQVLEGEDAIARYRELMGKTNPEEA 98          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_TERTT (Nucleoside diphosphate kinase OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=ndk PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.968e-15
Identity = 39/95 (41.05%), Postives = 61/95 (64.21%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            EKTL+++KP+ +  N   +I     ++G  I+  ++ +LD+D A  FY EH +R FF  L+++MTSGPVL  VLE ENA+   R ++G T+ + A
Sbjct:    4 EKTLSIVKPNAVKKNVIGDIYSRFEKAGLKIVAAKMTQLDDDRAGGFYEEHKARPFFGELVEFMTSGPVLIQVLEGENAVALNREIMGATNPENA 98          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_SORC5 (Nucleoside diphosphate kinase OS=Sorangium cellulosum (strain So ce56) GN=ndk PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.968e-15
Identity = 39/104 (37.50%), Postives = 60/104 (57.69%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAXISHPHRLY 490
            E+TL++IKPD +  N    I   + + GF++   + + L    A+ FYAEH  R FF  L+ +M+  P+L M LE+E+A+  +R +IG TD  KA      +LY
Sbjct:    4 ERTLSIIKPDAMEKNTAGAIVARLEQEGFTVKAMKRIHLTRAEAEGFYAEHRGRGFFDELVTFMSRSPILVMALEREDAVAKYREVIGATDPAKAAAGTIRKLY 107          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_SHEPW (Nucleoside diphosphate kinase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=ndk PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.968e-15
Identity = 37/95 (38.95%), Postives = 60/95 (63.16%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            E+T ++IKPD ++ N+   I      +G  I+  ++V L ++ A+ FYAEHS R FF +L+ +MTSGP++   LE ENA+   R ++G T+  +A
Sbjct:    4 ERTFSIIKPDAVAKNHIGAIYNRFETAGLKIIASKMVHLSQEQAEGFYAEHSERPFFGALVAFMTSGPIMVQTLEGENAVLAHREILGATNPAEA 98          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_SHEHH (Nucleoside diphosphate kinase OS=Shewanella halifaxensis (strain HAW-EB4) GN=ndk PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.968e-15
Identity = 37/95 (38.95%), Postives = 60/95 (63.16%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            E+T ++IKPD ++ N+   I      +G  I+  ++V L ++ A+ FYAEHS R FF +L+ +MTSGP++   LE ENA+   R ++G T+  +A
Sbjct:    4 ERTFSIIKPDAVAKNHIGAIYNRFETAGLKIIASKMVHLSQEQAEGFYAEHSERPFFGALVAFMTSGPIMVQTLEGENAVLAHREILGATNPAEA 98          
The following BLAST results are available for this feature:
BLAST of EY736446 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK_DEIRA6.866e-1541.05Nucleoside diphosphate kinase OS=Deinococcus radio... [more]
NDK_DEIDV6.866e-1541.05Nucleoside diphosphate kinase OS=Deinococcus deser... [more]
NDK_CAMHC6.866e-1544.21Nucleoside diphosphate kinase OS=Campylobacter hom... [more]
NDK_BART16.866e-1538.89Nucleoside diphosphate kinase OS=Bartonella triboc... [more]
NDK_BARQU6.866e-1539.81Nucleoside diphosphate kinase OS=Bartonella quinta... [more]
NDK_VIBHB8.968e-1541.05Nucleoside diphosphate kinase OS=Vibrio harveyi (s... [more]
NDK_TERTT8.968e-1541.05Nucleoside diphosphate kinase OS=Teredinibacter tu... [more]
NDK_SORC58.968e-1537.50Nucleoside diphosphate kinase OS=Sorangium cellulo... [more]
NDK_SHEPW8.968e-1538.95Nucleoside diphosphate kinase OS=Shewanella piezot... [more]
NDK_SHEHH8.968e-1538.95Nucleoside diphosphate kinase OS=Shewanella halifa... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-016-D09-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736446 ID=EY736446; Name=EY736446; organism=Citrus sinensis; type=EST; length=787bp
TAGGTCACCACGCGTCCGCTCAAAATTTGGTTTTCATATTTATTTATTTC
TTCATTGCTTCTGTATTAAGGTTTCAACAGTGGGAACTTTTGAAATGATT
CTTCGTGTTGTTGGGCTCTTCATTTTGGCCTGCATCTCTTCTCCCTGCAG
GTCTTTGAGCAATGGAAGTGTGGAAAAGGAGAAAACATTGGCTATGATAA
AGCCTGATGGATTGTCTGGTAACTACACTGATGAAATCAAAAAGGTGATT
CTGGAGTCTGGTTTCAGTATTTTGAGGGAAAGAGTGGTTCGACTTGATGA
GGATGGGGCGAAAACCTTTTACGCTGAGCACTCTTCAAGGAGCTTTTTTT
CTAGTCTTATCAAGTACATGACGAGTGGTCCAGTTTTAGCTATGGTTTTG
GAGAAGGAAAATGCCATTACTGATTGGCGTGCTTTGATTGGACCAACTGA
TGCAAAAAAGGCTANAATTTCTCATCCACACAGGTTATATGTGCTCCCAT
TTGGATAAATGTGTACTTGGTTATTATATAAACAGTTTGTGAGATTGACT
TACCTTTGTCACTGTACTTTTCTTTTGTGGCTGGTGATTTCTTGTCCATG
TTCCCTTGAATACTTCCACCATTAGGGCCATGTTCGGCTTGGATTCAGAA
AACAATTGTGTTCATGGGTTCTGACTCTCCGTGAGCGGCCCGAGGAGAGA
TGTCTTTTTTCTCTCAAGAGGTGTCTGCCCATGAGGTGAGGTGAAACAAT
GACTGGTGGGTGGGAAGCCCTTGAAGAAGAGCATGGG
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