EY736446

Overview
NameEY736446
Unique NameEY736446
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length787
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK5_MOUSE (Nucleoside diphosphate kinase homolog 5 OS=Mus musculus GN=Nme5 PE=2 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.251e-16
Identity = 43/103 (41.75%), Postives = 67/103 (65.05%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAXISHPHRL 487
            EKTLA+IKPD +     +EI+ +IL SGF+I++ R + L  +    FY E   + FF +L  YM+SGP++AM+L +  AI+ W+ L+GP+++  A  +HP  L
Sbjct:   13 EKTLALIKPDVVDKE--EEIQDIILGSGFTIIQRRKLHLSPEHCSNFYVEQYGKMFFPNLTAYMSSGPLVAMILARHKAISYWKELMGPSNSLVAKETHPDSL 113          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_METS4 (Nucleoside diphosphate kinase OS=Methylobacterium sp. (strain 4-46) GN=ndk PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.634e-16
Identity = 40/95 (42.11%), Postives = 62/95 (65.26%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            E+T +++KPD  + N T  I  VI E+G  I+ +R +R+ E  AKTFY  H+ R F+  L+ +MTSGPV+  VLE +NA+  +R ++G T+  +A
Sbjct:    4 ERTFSILKPDATARNLTGAINAVIEEAGLRIVAQRRIRMSEAQAKTFYEVHAERPFYGELVSFMTSGPVVVQVLEGDNAVAKYREVMGATNPAQA 98          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK5_HUMAN (Nucleoside diphosphate kinase homolog 5 OS=Homo sapiens GN=NME5 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.634e-16
Identity = 44/103 (42.72%), Postives = 66/103 (64.08%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAXISHPHRL 487
            EKTLA+IKPD +     +EI+ +IL SGF+I++ R +RL  +    FY E   + FF +L  YM+SGP++AM+L +  AI+ W  L+GP ++  A  +HP  L
Sbjct:   13 EKTLAIIKPDIVDKE--EEIQDIILRSGFTIVQRRKLRLSPEQCSNFYVEKYGKMFFPNLTAYMSSGPLVAMILARHKAISYWLELLGPNNSLVAKETHPDSL 113          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: TXND3_ANTCR (Thioredoxin domain-containing protein 3 homolog OS=Anthocidaris crassispina GN=IC1 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.134e-16
Identity = 47/103 (45.63%), Postives = 63/103 (61.17%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAXISHPHRL 487
            EKTLA+I+P  L  ++ DE+ + I E+GF +  +++V+L ED AK FY E      F  LI+ MTSG VLA+ L KE+AI  WR  IGPT   +A    P  L
Sbjct:  356 EKTLALIRPSALK-DHKDEMLQKIQEAGFEVCLQKMVQLTEDQAKEFYKEQEGTPHFEDLIREMTSGEVLALGLAKESAIQSWREFIGPTTIDEAKEKAPDSL 457          

HSP 2 Score: 83.1889 bits (204), Expect = 1.807e-15
Identity = 44/107 (41.12%), Postives = 66/107 (61.68%), Query Frame = 2
Query:  176 KEKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAXISHPHRLYVL 496
            K+ TLA+IKPD  +G + + I + I E+GF+I  +R V L+++ A   Y EH  + F+ +LI +M+SG  + MVL +E+A+  WR L+GPTD   A    P  L  L
Sbjct:  490 KQTTLAVIKPDA-AGEHKEAIIEKIKEAGFNISLQRDVELNKELASKLYLEHEGKEFYENLIDHMSSGLSMVMVLSREDAVDGWRTLMGPTDPDYAREHAPESLRAL 595          

HSP 3 Score: 70.0922 bits (170), Expect = 1.583e-11
Identity = 40/110 (36.36%), Postives = 56/110 (50.91%), Query Frame = 2
Query:  170 VEKEKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEK----ENAITDWRALIGPTDAKKAXISHPHRL 487
            V KE T+ +IKPD ++  + D I   I E GF IL      L ED A+ FY +H     F  L+ +M SGP   +VL +    E  +++ R L+GP D + A    P  L
Sbjct:  199 VPKEVTVVLIKPDAVANGHVDSIIAKIEEHGFEILTTEDKTLTEDEAREFYKQHEEEEHFEVLVTFMASGPSKILVLTRGDTGEGVVSEVRNLLGPKDIEVAKEEAPDSL 308          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_PSYCK (Nucleoside diphosphate kinase OS=Psychrobacter cryohalolentis (strain K5) GN=ndk PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.134e-16
Identity = 43/95 (45.26%), Postives = 63/95 (66.32%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            E+TL++IKPD ++GN    I     +SG  I+  ++++LD+  A  FYAEH+ R F++ L+ +MTSGPVL  VLE ENAI   R ++G T+ K A
Sbjct:    4 ERTLSIIKPDAVAGNNIGAIYDRFEKSGLKIVAAKMMQLDDKKAGGFYAEHAERPFYNDLVSFMTSGPVLVSVLEGENAIATHRDIMGATNPKDA 98          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_PSYWF (Nucleoside diphosphate kinase OS=Psychrobacter sp. (strain PRwf-1) GN=ndk PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.788e-16
Identity = 41/95 (43.16%), Postives = 62/95 (65.26%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            E+TL++IKPD + GN+   I     E+G  I+  +++ LD++ A  FYAEH  R F++ L+ +MTSGPV+  VLE ENAI   R ++G T+  +A
Sbjct:    4 ERTLSIIKPDAVGGNHIGAIYSRFEEAGLKIVGAKMLHLDDEKAGGFYAEHKERPFYNDLVSFMTSGPVVVSVLEGENAIAKHREIMGATNPAEA 98          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_PSEAE (Nucleoside diphosphate kinase OS=Pseudomonas aeruginosa GN=ndk PE=3 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 2.788e-16
Identity = 44/95 (46.32%), Postives = 61/95 (64.21%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            ++TL++IKPD +S N   EI     ++G  ++  ++V+L E  A  FYAEH  R FF  L+ +MTSGPV+  VLE E+AI   R L+G TD KKA
Sbjct:    4 QRTLSIIKPDAVSKNVIGEILTRFEKAGLRVVAAKMVQLSEREAGGFYAEHKERPFFKDLVSFMTSGPVVVQVLEGEDAIAKNRELMGATDPKKA 98          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_PSEAB (Nucleoside diphosphate kinase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=ndk PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.788e-16
Identity = 44/95 (46.32%), Postives = 61/95 (64.21%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            ++TL++IKPD +S N   EI     ++G  ++  ++V+L E  A  FYAEH  R FF  L+ +MTSGPV+  VLE E+AI   R L+G TD KKA
Sbjct:    4 QRTLSIIKPDAVSKNVIGEILTRFEKAGLRVVAAKMVQLSEREAGGFYAEHKERPFFKDLVSFMTSGPVVVQVLEGEDAIAKNRELMGATDPKKA 98          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_PSEA8 (Nucleoside diphosphate kinase OS=Pseudomonas aeruginosa (strain LESB58) GN=ndk PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.788e-16
Identity = 44/95 (46.32%), Postives = 61/95 (64.21%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            ++TL++IKPD +S N   EI     ++G  ++  ++V+L E  A  FYAEH  R FF  L+ +MTSGPV+  VLE E+AI   R L+G TD KKA
Sbjct:    4 QRTLSIIKPDAVSKNVIGEILTRFEKAGLRVVAAKMVQLSEREAGGFYAEHKERPFFKDLVSFMTSGPVVVQVLEGEDAIAKNRELMGATDPKKA 98          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_PSEA7 (Nucleoside diphosphate kinase OS=Pseudomonas aeruginosa (strain PA7) GN=ndk PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.788e-16
Identity = 44/95 (46.32%), Postives = 61/95 (64.21%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            ++TL++IKPD +S N   EI     ++G  ++  ++V+L E  A  FYAEH  R FF  L+ +MTSGPV+  VLE E+AI   R L+G TD KKA
Sbjct:    4 QRTLSIIKPDAVSKNVIGEILTRFEKAGLRVVAAKMVQLSEREAGGFYAEHKERPFFKDLVSFMTSGPVVVQVLEGEDAIAKNRELMGATDPKKA 98          
The following BLAST results are available for this feature:
BLAST of EY736446 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK5_MOUSE1.251e-1641.75Nucleoside diphosphate kinase homolog 5 OS=Mus mus... [more]
NDK_METS41.634e-1642.11Nucleoside diphosphate kinase OS=Methylobacterium ... [more]
NDK5_HUMAN1.634e-1642.72Nucleoside diphosphate kinase homolog 5 OS=Homo sa... [more]
TXND3_ANTCR2.134e-1645.63Thioredoxin domain-containing protein 3 homolog OS... [more]
NDK_PSYCK2.134e-1645.26Nucleoside diphosphate kinase OS=Psychrobacter cry... [more]
NDK_PSYWF2.788e-1643.16Nucleoside diphosphate kinase OS=Psychrobacter sp.... [more]
NDK_PSEAE2.788e-1646.32Nucleoside diphosphate kinase OS=Pseudomonas aerug... [more]
NDK_PSEAB2.788e-1646.32Nucleoside diphosphate kinase OS=Pseudomonas aerug... [more]
NDK_PSEA82.788e-1646.32Nucleoside diphosphate kinase OS=Pseudomonas aerug... [more]
NDK_PSEA72.788e-1646.32Nucleoside diphosphate kinase OS=Pseudomonas aerug... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-016-D09-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736446 ID=EY736446; Name=EY736446; organism=Citrus sinensis; type=EST; length=787bp
TAGGTCACCACGCGTCCGCTCAAAATTTGGTTTTCATATTTATTTATTTC
TTCATTGCTTCTGTATTAAGGTTTCAACAGTGGGAACTTTTGAAATGATT
CTTCGTGTTGTTGGGCTCTTCATTTTGGCCTGCATCTCTTCTCCCTGCAG
GTCTTTGAGCAATGGAAGTGTGGAAAAGGAGAAAACATTGGCTATGATAA
AGCCTGATGGATTGTCTGGTAACTACACTGATGAAATCAAAAAGGTGATT
CTGGAGTCTGGTTTCAGTATTTTGAGGGAAAGAGTGGTTCGACTTGATGA
GGATGGGGCGAAAACCTTTTACGCTGAGCACTCTTCAAGGAGCTTTTTTT
CTAGTCTTATCAAGTACATGACGAGTGGTCCAGTTTTAGCTATGGTTTTG
GAGAAGGAAAATGCCATTACTGATTGGCGTGCTTTGATTGGACCAACTGA
TGCAAAAAAGGCTANAATTTCTCATCCACACAGGTTATATGTGCTCCCAT
TTGGATAAATGTGTACTTGGTTATTATATAAACAGTTTGTGAGATTGACT
TACCTTTGTCACTGTACTTTTCTTTTGTGGCTGGTGATTTCTTGTCCATG
TTCCCTTGAATACTTCCACCATTAGGGCCATGTTCGGCTTGGATTCAGAA
AACAATTGTGTTCATGGGTTCTGACTCTCCGTGAGCGGCCCGAGGAGAGA
TGTCTTTTTTCTCTCAAGAGGTGTCTGCCCATGAGGTGAGGTGAAACAAT
GACTGGTGGGTGGGAAGCCCTTGAAGAAGAGCATGGG
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