EY736446

Overview
NameEY736446
Unique NameEY736446
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length787
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_METFK (Nucleoside diphosphate kinase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=ndk PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.788e-16
Identity = 42/95 (44.21%), Postives = 62/95 (65.26%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            E+TL++IKPD ++ N   +I     ++G  I+  ++V+L +  A+ FYA H  R FF+ L+K+M SGPV+  VLE ENA+   R L+G TD KKA
Sbjct:    4 ERTLSIIKPDAVAKNVIGKIYTRFEDAGLKIIASKMVQLSQADAEGFYAVHKERPFFNDLVKFMISGPVVVQVLEGENAVLKHRELMGATDPKKA 98          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_HAEIN (Nucleoside diphosphate kinase OS=Haemophilus influenzae GN=ndk PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.788e-16
Identity = 41/95 (43.16%), Postives = 61/95 (64.21%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            E+T ++IKPD +  N    I     ++GF I+  ++VRL  + A+ FYAEH  + FF  L++YM S P++  VLEKENA+ D+R LIG T+ + A
Sbjct:    4 ERTFSIIKPDVVKRNLIGAILTRFEQNGFKIIASKMVRLTREQAEGFYAEHQGKEFFVPLVEYMMSSPIVVSVLEKENAVKDYRTLIGTTNPETA 98          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_ACICJ (Nucleoside diphosphate kinase OS=Acidiphilium cryptum (strain JF-5) GN=ndk PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.788e-16
Identity = 41/95 (43.16%), Postives = 61/95 (64.21%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            E+TL++IKPD    N T  I     E+G  I+ ++ +RL +D A+ FY  H  R FF+ L+ +MTSGPV+  VLE ++A+   RA++G TD +KA
Sbjct:    4 ERTLSIIKPDATRRNLTGRINAKFEEAGLRIVAQKRIRLTKDQAEAFYGVHKERPFFAGLVSFMTSGPVVVQVLEGDDAVARNRAIMGATDPRKA 98          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK2_PARUW (Nucleoside diphosphate kinase 2 OS=Protochlamydia amoebophila (strain UWE25) GN=ndk2 PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.788e-16
Identity = 43/95 (45.26%), Postives = 61/95 (64.21%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            E+TL++IKPD +  N+  EI     ++G  I+  ++ +LD   A+ FYA H  R FF  L+ +MT+GPV+ MVLE ENAI   R ++G TD KKA
Sbjct:    4 ERTLSIIKPDAVGNNHIGEIIARFEKAGLRIVAAKMKQLDRKDAEGFYAVHKGRPFFEDLVGFMTTGPVMIMVLEGENAINKNREIMGATDPKKA 98          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_PASMU (Nucleoside diphosphate kinase OS=Pasteurella multocida GN=ndk PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.641e-16
Identity = 40/91 (43.96%), Postives = 61/91 (67.03%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTD 451
            E+TL++IKPD +  +    I     ++GF ++  +++ L +  A+ FYAEH  ++FF  L+ YM S PVLA+VLEKENA+ D+R LIG T+
Sbjct:    4 ERTLSLIKPDAVKRHLIGAILSRFEQAGFRVVAAKMLHLTQAQAEGFYAEHQDKAFFPELVAYMISAPVLALVLEKENAVKDYRTLIGATN 94          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_NITMU (Nucleoside diphosphate kinase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=ndk PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.641e-16
Identity = 44/95 (46.32%), Postives = 61/95 (64.21%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            E+TL++IKPD ++ N   EI      +G  I+  R+VRL +  A+ FYA H  R FF+ L+K+M SGPV+  VLE E+AI   R L+G TD +KA
Sbjct:    4 ERTLSIIKPDAVAKNIIGEIYSRFERNGLKIVASRMVRLSQADAEGFYAVHRERPFFNDLVKFMISGPVMVQVLEGEDAIRKNRDLMGATDPRKA 98          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_GRAFK (Nucleoside diphosphate kinase OS=Gramella forsetii (strain KT0803) GN=ndk PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.641e-16
Identity = 41/108 (37.96%), Postives = 64/108 (59.26%), Query Frame = 2
Query:  182 KTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAXISHPHRLYVLPFG 505
            +T  MIKPD +   +   I   I  SGF I+  ++ ++ +  A+TFYA H+ R FF  L+++MT GP++A +LEK+NA+ D+R LIG T+ + A      + Y    G
Sbjct:    5 RTFTMIKPDAVENGHIGGILDQITASGFRIVALKLTQMTQRDAETFYAVHNERPFFGELVEFMTRGPIVAAILEKDNAVEDFRTLIGATNPEDAAEGTIRKKYAKSIG 112          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_RHOPT (Nucleoside diphosphate kinase OS=Rhodopseudomonas palustris (strain TIE-1) GN=ndk PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.755e-16
Identity = 42/109 (38.53%), Postives = 63/109 (57.80%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAXISHPHRLYVLPFG 505
            E+T +++KPD    N T  I  +I ++G  I+ ++ +R+  D A+TFYA H  R FF  L+ +M SGPV+  VLE E AI  +R ++G TD  KA      +L+    G
Sbjct:    4 ERTFSILKPDATERNITGAINALIEKAGLRIVAQKRIRMTRDQAETFYAVHKERPFFGELVDFMISGPVVVQVLEGEGAIAKYRDVMGATDPSKAADGTIRKLHAKSIG 112          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_RHOPA (Nucleoside diphosphate kinase OS=Rhodopseudomonas palustris GN=ndk PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.755e-16
Identity = 42/109 (38.53%), Postives = 63/109 (57.80%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAXISHPHRLYVLPFG 505
            E+T +++KPD    N T  I  +I ++G  I+ ++ +R+  D A+TFYA H  R FF  L+ +M SGPV+  VLE E AI  +R ++G TD  KA      +L+    G
Sbjct:    4 ERTFSILKPDATERNITGAINALIEKAGLRIVAQKRIRMTRDQAETFYAVHKERPFFGELVDFMISGPVVVQVLEGEGAIAKYRDVMGATDPSKAADGTIRKLHAKSIG 112          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_NITHX (Nucleoside diphosphate kinase OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=ndk PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.755e-16
Identity = 41/109 (37.61%), Postives = 65/109 (59.63%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAXISHPHRLYVLPFG 505
            E+T +++KPD  + N T  I  +I ++G  I+ ++ +R+  + A+TFYA H +R FF  L+ +M SGPV+  VLE ENA+   R ++G TD  KA      +L+    G
Sbjct:    4 ERTFSILKPDATARNLTGAINALIEKAGLRIVAQKRIRMTREQAETFYAVHKARPFFGELVDFMISGPVVVQVLEGENAVLKHREIMGATDPSKAADGTIRKLHATSVG 112          
The following BLAST results are available for this feature:
BLAST of EY736446 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK_METFK2.788e-1644.21Nucleoside diphosphate kinase OS=Methylobacillus f... [more]
NDK_HAEIN2.788e-1643.16Nucleoside diphosphate kinase OS=Haemophilus influ... [more]
NDK_ACICJ2.788e-1643.16Nucleoside diphosphate kinase OS=Acidiphilium cryp... [more]
NDK2_PARUW2.788e-1645.26Nucleoside diphosphate kinase 2 OS=Protochlamydia ... [more]
NDK_PASMU3.641e-1643.96Nucleoside diphosphate kinase OS=Pasteurella multo... [more]
NDK_NITMU3.641e-1646.32Nucleoside diphosphate kinase OS=Nitrosospira mult... [more]
NDK_GRAFK3.641e-1637.96Nucleoside diphosphate kinase OS=Gramella forsetii... [more]
NDK_RHOPT4.755e-1638.53Nucleoside diphosphate kinase OS=Rhodopseudomonas ... [more]
NDK_RHOPA4.755e-1638.53Nucleoside diphosphate kinase OS=Rhodopseudomonas ... [more]
NDK_NITHX4.755e-1637.61Nucleoside diphosphate kinase OS=Nitrobacter hambu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-016-D09-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736446 ID=EY736446; Name=EY736446; organism=Citrus sinensis; type=EST; length=787bp
TAGGTCACCACGCGTCCGCTCAAAATTTGGTTTTCATATTTATTTATTTC
TTCATTGCTTCTGTATTAAGGTTTCAACAGTGGGAACTTTTGAAATGATT
CTTCGTGTTGTTGGGCTCTTCATTTTGGCCTGCATCTCTTCTCCCTGCAG
GTCTTTGAGCAATGGAAGTGTGGAAAAGGAGAAAACATTGGCTATGATAA
AGCCTGATGGATTGTCTGGTAACTACACTGATGAAATCAAAAAGGTGATT
CTGGAGTCTGGTTTCAGTATTTTGAGGGAAAGAGTGGTTCGACTTGATGA
GGATGGGGCGAAAACCTTTTACGCTGAGCACTCTTCAAGGAGCTTTTTTT
CTAGTCTTATCAAGTACATGACGAGTGGTCCAGTTTTAGCTATGGTTTTG
GAGAAGGAAAATGCCATTACTGATTGGCGTGCTTTGATTGGACCAACTGA
TGCAAAAAAGGCTANAATTTCTCATCCACACAGGTTATATGTGCTCCCAT
TTGGATAAATGTGTACTTGGTTATTATATAAACAGTTTGTGAGATTGACT
TACCTTTGTCACTGTACTTTTCTTTTGTGGCTGGTGATTTCTTGTCCATG
TTCCCTTGAATACTTCCACCATTAGGGCCATGTTCGGCTTGGATTCAGAA
AACAATTGTGTTCATGGGTTCTGACTCTCCGTGAGCGGCCCGAGGAGAGA
TGTCTTTTTTCTCTCAAGAGGTGTCTGCCCATGAGGTGAGGTGAAACAAT
GACTGGTGGGTGGGAAGCCCTTGAAGAAGAGCATGGG
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