EY736446

Overview
NameEY736446
Unique NameEY736446
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length787
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_HAEI8 (Nucleoside diphosphate kinase OS=Haemophilus influenzae (strain 86-028NP) GN=ndk PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.755e-16
Identity = 40/95 (42.11%), Postives = 61/95 (64.21%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            E+T ++IK D +  N    I     ++GF I+  ++VRL  + A+ FYAEH  + FF+ L++YM S P++  VLEKENA+ D+R LIG T+ + A
Sbjct:    4 ERTFSIIKSDAVKRNLIGAILTRFEQNGFKIIASKMVRLTREQAEGFYAEHQGKEFFAPLVEYMMSSPIVVSVLEKENAVKDYRTLIGTTNPETA 98          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_CHLTE (Nucleoside diphosphate kinase OS=Chlorobium tepidum GN=ndk PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.755e-16
Identity = 41/104 (39.42%), Postives = 63/104 (60.58%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAXISHPHRLY 490
            E+TL ++KPD +       +  +I  +GF I+  +  RL ++ A  FYA H  R F+  L+++M+SGP + M+LEKENA+ D+R LIG TD  +A      +LY
Sbjct:    2 ERTLTILKPDCVRKQLIGAVTNMIERAGFRIVAMKKTRLTKETAGAFYAVHKERPFYGELVEFMSSGPCVPMILEKENAVADFRTLIGATDPAQADEGTIRKLY 105          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_BRASO (Nucleoside diphosphate kinase OS=Bradyrhizobium sp. (strain ORS278) GN=ndk PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.755e-16
Identity = 41/95 (43.16%), Postives = 60/95 (63.16%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            E+T ++IKPD    N T  I  +I ++G  I+ ++ +R+  D A+TFYA H +R FF  L+ +M SGPV+  VLE E AI  +R ++G TD  KA
Sbjct:    4 ERTFSIIKPDATERNLTGAINALIEKAGLRIVAQKRIRMTRDQAETFYAVHKARPFFGELVDFMISGPVVVQVLEGEGAILKYRDVMGATDPSKA 98          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK7_RAT (Nucleoside diphosphate kinase 7 OS=Rattus norvegicus GN=Nme7 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.755e-16
Identity = 43/101 (42.57%), Postives = 69/101 (68.32%), Query Frame = 2
Query:  176 KEKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAXISHP 478
            KEKTLA+IKPD +S     EI ++I +SGF+I + R++ L    A  F+ +H SR F++ LI+++TSGPV+AM + +++AI +W+ L+GP ++  A    P
Sbjct:  110 KEKTLALIKPDAVSK--AGEIIEMINKSGFTITKLRMMTLSRKEAADFHVDHHSRPFYNELIQFITSGPVIAMEILRDDAICEWKRLLGPANSGIARSEAP 208          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_ACTPJ (Nucleoside diphosphate kinase OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=ndk PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 5.655e-16
Identity = 39/106 (36.79%), Postives = 67/106 (63.21%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAXISHPHRLYVL 496
            ++TL +IKPD    N   +I   + E+G +I   + V+L+++ A+ FYAEH  + FF+ L+++M S P++A+VLE ENAI+ +R L+G T+ ++        LY +
Sbjct:    3 QQTLCLIKPDATQRNLIGKILSHLEEAGLTIKALKKVQLNQEQAEGFYAEHQGKEFFAPLVEFMISAPIVAVVLEGENAISHYRELMGATNPEQRKAGTIRALYAI 108          

HSP 2 Score: 25.0238 bits (53), Expect = 5.655e-16
Identity = 11/33 (33.33%), Postives = 16/33 (48.48%), Query Frame = 3
Query:  618 TIRAMFGLDSENNCVHGF*LSVSGPRRDVFFLS 716
            TIRA++ +    N VHG     S  R   +F +
Sbjct:  101 TIRALYAISGRENSVHGSDSEQSAKREIAYFFT 133          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_ACTP7 (Nucleoside diphosphate kinase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=ndk PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 5.655e-16
Identity = 39/106 (36.79%), Postives = 67/106 (63.21%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAXISHPHRLYVL 496
            ++TL +IKPD    N   +I   + E+G +I   + V+L+++ A+ FYAEH  + FF+ L+++M S P++A+VLE ENAI+ +R L+G T+ ++        LY +
Sbjct:    3 QQTLCLIKPDATQRNLIGKILSHLEEAGLTIKALKKVQLNQEQAEGFYAEHQGKEFFAPLVEFMISAPIVAVVLEGENAISHYRELMGATNPEQRKAGTIRALYAI 108          

HSP 2 Score: 25.0238 bits (53), Expect = 5.655e-16
Identity = 11/33 (33.33%), Postives = 16/33 (48.48%), Query Frame = 3
Query:  618 TIRAMFGLDSENNCVHGF*LSVSGPRRDVFFLS 716
            TIRA++ +    N VHG     S  R   +F +
Sbjct:  101 TIRALYAISGRENSVHGSDSEQSAKREIAYFFT 133          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_RHOPB (Nucleoside diphosphate kinase OS=Rhodopseudomonas palustris (strain BisB18) GN=ndk PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.210e-16
Identity = 39/95 (41.05%), Postives = 60/95 (63.16%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            E+T +++KPD    N T  I  +I ++G  I+ ++ +R+  D A+TFYA H +R FF  L+ +M SGPV+  VLE E A+  +R ++G TD  KA
Sbjct:    4 ERTFSILKPDATKRNLTGAINALIEQAGLRIVAQKRIRMTRDQAETFYAVHKARPFFGELVDFMVSGPVVVQVLEGEGAVLKYRDVMGATDPSKA 98          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_DESDG (Nucleoside diphosphate kinase OS=Desulfovibrio desulfuricans (strain G20) GN=ndk PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.210e-16
Identity = 41/95 (43.16%), Postives = 60/95 (63.16%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            E+T A+IKPD    N    I  VI ++G  ++  + +RL  + A+ FY  H  R FF+SL  +MTSGP++AMVLE +NA+  WR L+G T+ + A
Sbjct:    3 ERTFAIIKPDATRRNLEGPILSVIQQNGLRVVAMKKMRLTREQAEGFYHVHKERPFFASLTDFMTSGPIVAMVLEGDNAVARWRELMGATNPENA 97          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_ACIBL (Nucleoside diphosphate kinase OS=Acidobacteria bacterium (strain Ellin345) GN=ndk PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.210e-16
Identity = 40/95 (42.11%), Postives = 64/95 (67.37%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            ++TL++IKPD +  N   +I  ++L + F IL  +++ L ++ A+ FYA H+++ FF SL  +M SGP++ M LEKENAI D+R L+G T+   A
Sbjct:    5 QRTLSIIKPDAVEKNAEGDIISILLNNNFRILGIKMLHLTKNQAEGFYAVHANKPFFHSLTDFMASGPIVVMCLEKENAIADYRKLMGATNPANA 99          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_ACTP2 (Nucleoside diphosphate kinase OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=ndk PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 7.351e-16
Identity = 39/106 (36.79%), Postives = 66/106 (62.26%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAXISHPHRLYVL 496
            ++TL +IKPD    N   +I   + E+G +I   + V+L+++ A+ FYAEH  + FF+ L+++M S P++A+VLE ENAI  +R L+G T+ ++        LY +
Sbjct:    3 QQTLCLIKPDATQRNLIGKILSHLEEAGLTIKALKKVQLNQEQAEGFYAEHQGKEFFAPLVEFMISAPIVAVVLEGENAIAHYRELMGATNPEQRKAGTIRALYAI 108          

HSP 2 Score: 25.0238 bits (53), Expect = 7.351e-16
Identity = 11/33 (33.33%), Postives = 16/33 (48.48%), Query Frame = 3
Query:  618 TIRAMFGLDSENNCVHGF*LSVSGPRRDVFFLS 716
            TIRA++ +    N VHG     S  R   +F +
Sbjct:  101 TIRALYAISGRENSVHGSDSEQSAKREIAYFFT 133          
The following BLAST results are available for this feature:
BLAST of EY736446 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK_HAEI84.755e-1642.11Nucleoside diphosphate kinase OS=Haemophilus influ... [more]
NDK_CHLTE4.755e-1639.42Nucleoside diphosphate kinase OS=Chlorobium tepidu... [more]
NDK_BRASO4.755e-1643.16Nucleoside diphosphate kinase OS=Bradyrhizobium sp... [more]
NDK7_RAT4.755e-1642.57Nucleoside diphosphate kinase 7 OS=Rattus norvegic... [more]
NDK_ACTPJ5.655e-1636.79Nucleoside diphosphate kinase OS=Actinobacillus pl... [more]
NDK_ACTP75.655e-1636.79Nucleoside diphosphate kinase OS=Actinobacillus pl... [more]
NDK_RHOPB6.210e-1641.05Nucleoside diphosphate kinase OS=Rhodopseudomonas ... [more]
NDK_DESDG6.210e-1643.16Nucleoside diphosphate kinase OS=Desulfovibrio des... [more]
NDK_ACIBL6.210e-1642.11Nucleoside diphosphate kinase OS=Acidobacteria bac... [more]
NDK_ACTP27.351e-1636.79Nucleoside diphosphate kinase OS=Actinobacillus pl... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-016-D09-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736446 ID=EY736446; Name=EY736446; organism=Citrus sinensis; type=EST; length=787bp
TAGGTCACCACGCGTCCGCTCAAAATTTGGTTTTCATATTTATTTATTTC
TTCATTGCTTCTGTATTAAGGTTTCAACAGTGGGAACTTTTGAAATGATT
CTTCGTGTTGTTGGGCTCTTCATTTTGGCCTGCATCTCTTCTCCCTGCAG
GTCTTTGAGCAATGGAAGTGTGGAAAAGGAGAAAACATTGGCTATGATAA
AGCCTGATGGATTGTCTGGTAACTACACTGATGAAATCAAAAAGGTGATT
CTGGAGTCTGGTTTCAGTATTTTGAGGGAAAGAGTGGTTCGACTTGATGA
GGATGGGGCGAAAACCTTTTACGCTGAGCACTCTTCAAGGAGCTTTTTTT
CTAGTCTTATCAAGTACATGACGAGTGGTCCAGTTTTAGCTATGGTTTTG
GAGAAGGAAAATGCCATTACTGATTGGCGTGCTTTGATTGGACCAACTGA
TGCAAAAAAGGCTANAATTTCTCATCCACACAGGTTATATGTGCTCCCAT
TTGGATAAATGTGTACTTGGTTATTATATAAACAGTTTGTGAGATTGACT
TACCTTTGTCACTGTACTTTTCTTTTGTGGCTGGTGATTTCTTGTCCATG
TTCCCTTGAATACTTCCACCATTAGGGCCATGTTCGGCTTGGATTCAGAA
AACAATTGTGTTCATGGGTTCTGACTCTCCGTGAGCGGCCCGAGGAGAGA
TGTCTTTTTTCTCTCAAGAGGTGTCTGCCCATGAGGTGAGGTGAAACAAT
GACTGGTGGGTGGGAAGCCCTTGAAGAAGAGCATGGG
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