EY736446

Overview
NameEY736446
Unique NameEY736446
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length787
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_AZOSB (Nucleoside diphosphate kinase OS=Azoarcus sp. (strain BH72) GN=ndk PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.384e-15
Identity = 42/95 (44.21%), Postives = 59/95 (62.11%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            E+TL++IKPD ++ N   +I +   ++G  I+  ++V L E  A  FYA H  R F+  L+ +MTSGPV+   LE ENAI   R L+G TD KKA
Sbjct:    4 ERTLSIIKPDAVAKNVIGKIYQRFEDAGLKIIAAKMVHLSEQEAGQFYAVHKERPFYKDLVSFMTSGPVMIQCLEGENAIAKNRELMGATDPKKA 98          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_PSYA2 (Nucleoside diphosphate kinase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=ndk PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.807e-15
Identity = 42/95 (44.21%), Postives = 62/95 (65.26%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            E+TL++IKPD ++GN    I     +SG  I+  ++++LD++ A  FYAEH+ R F++ L  +M SGPVL  VLE ENAI   R ++G T+ K A
Sbjct:    4 ERTLSIIKPDAVAGNNIGAIYDRFEKSGLKIVAAKMMQLDDEKAGGFYAEHAERPFYNDLKSFMMSGPVLVSVLEGENAIAKHREIMGATNPKDA 98          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_HALHL (Nucleoside diphosphate kinase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=ndk PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.807e-15
Identity = 42/95 (44.21%), Postives = 62/95 (65.26%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            E+TL++IKPD ++ N   EI      SG  ++  R+VRL  + A++FYA H  R FF+ L+ +MTSGPV+  VLE E+AI   R ++G T+ K+A
Sbjct:    4 ERTLSIIKPDAVAQNAIGEILARFERSGLRVVAARMVRLSTEQAESFYAVHKERPFFNDLVGFMTSGPVMVQVLEGEDAIRKNREIMGATNPKEA 98          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_EHRCJ (Nucleoside diphosphate kinase OS=Ehrlichia canis (strain Jake) GN=ndk PE=3 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.807e-15
Identity = 41/95 (43.16%), Postives = 61/95 (64.21%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            E+TL+++KPD +  N T ++   I  SG  I+ +++  L    A+ FYA H S+ FF  L+ +M SGP++  VLE ENAI+ +R L+G TD KKA
Sbjct:    3 ERTLSILKPDVVKRNITGQVNSYIENSGLKIVTQKMCLLTRFQAEEFYAIHKSQHFFIPLVDFMVSGPIIVQVLEGENAISLYRELMGATDPKKA 97          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_COLP3 (Nucleoside diphosphate kinase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=ndk PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.807e-15
Identity = 37/95 (38.95%), Postives = 63/95 (66.32%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            E+T +++KPD ++ N+  +I      +G  I+  +++ L ++ A+ FYAEHS R FF +L+++MTSGPV+  VLE ENA+   R ++G T+  +A
Sbjct:    4 ERTFSIVKPDAVAKNFIGQIYNRFETAGLKIVASKMIHLSQEKAEGFYAEHSERPFFGALVEFMTSGPVMVQVLEGENAVLKNREIMGATNPAEA 98          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_ACIBY (Nucleoside diphosphate kinase OS=Acinetobacter baumannii (strain AYE) GN=ndk PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.807e-15
Identity = 40/95 (42.11%), Postives = 61/95 (64.21%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            E+TL+++KPD +S N+  EI     ++G  I+  ++  L +  A+ FYAEH  R FF  L+ +MTSGPV+  VLE ENA+   R ++G T+ K+A
Sbjct:    4 ERTLSIVKPDAVSKNHIGEIFARFEKAGLKIVATKMKHLSQADAEGFYAEHKERGFFGDLVAFMTSGPVVVSVLEGENAVLAHREILGATNPKEA 98          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_ACIBT (Nucleoside diphosphate kinase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=ndk PE=3 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.807e-15
Identity = 40/95 (42.11%), Postives = 61/95 (64.21%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            E+TL+++KPD +S N+  EI     ++G  I+  ++  L +  A+ FYAEH  R FF  L+ +MTSGPV+  VLE ENA+   R ++G T+ K+A
Sbjct:    4 ERTLSIVKPDAVSKNHIGEIFARFEKAGLKIVATKMKHLSQADAEGFYAEHKERGFFGDLVAFMTSGPVVVSVLEGENAVLAHREILGATNPKEA 98          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_ACIBS (Nucleoside diphosphate kinase OS=Acinetobacter baumannii (strain SDF) GN=ndk PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.807e-15
Identity = 40/95 (42.11%), Postives = 61/95 (64.21%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            E+TL+++KPD +S N+  EI     ++G  I+  ++  L +  A+ FYAEH  R FF  L+ +MTSGPV+  VLE ENA+   R ++G T+ K+A
Sbjct:    4 ERTLSIVKPDAVSKNHIGEIFARFEKAGLKIVATKMKHLSQADAEGFYAEHKERGFFGDLVAFMTSGPVVVSVLEGENAVLAHREILGATNPKEA 98          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_ACIBC (Nucleoside diphosphate kinase OS=Acinetobacter baumannii (strain ACICU) GN=ndk PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.807e-15
Identity = 40/95 (42.11%), Postives = 61/95 (64.21%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            E+TL+++KPD +S N+  EI     ++G  I+  ++  L +  A+ FYAEH  R FF  L+ +MTSGPV+  VLE ENA+   R ++G T+ K+A
Sbjct:    4 ERTLSIVKPDAVSKNHIGEIFARFEKAGLKIVATKMKHLSQADAEGFYAEHKERGFFGDLVAFMTSGPVVVSVLEGENAVLAHREILGATNPKEA 98          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_ACIB5 (Nucleoside diphosphate kinase OS=Acinetobacter baumannii (strain AB0057) GN=ndk PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.807e-15
Identity = 40/95 (42.11%), Postives = 61/95 (64.21%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            E+TL+++KPD +S N+  EI     ++G  I+  ++  L +  A+ FYAEH  R FF  L+ +MTSGPV+  VLE ENA+   R ++G T+ K+A
Sbjct:    4 ERTLSIVKPDAVSKNHIGEIFARFEKAGLKIVATKMKHLSQADAEGFYAEHKERGFFGDLVAFMTSGPVVVSVLEGENAVLAHREILGATNPKEA 98          
The following BLAST results are available for this feature:
BLAST of EY736446 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK_AZOSB1.384e-1544.21Nucleoside diphosphate kinase OS=Azoarcus sp. (str... [more]
NDK_PSYA21.807e-1544.21Nucleoside diphosphate kinase OS=Psychrobacter arc... [more]
NDK_HALHL1.807e-1544.21Nucleoside diphosphate kinase OS=Halorhodospira ha... [more]
NDK_EHRCJ1.807e-1543.16Nucleoside diphosphate kinase OS=Ehrlichia canis (... [more]
NDK_COLP31.807e-1538.95Nucleoside diphosphate kinase OS=Colwellia psychre... [more]
NDK_ACIBY1.807e-1542.11Nucleoside diphosphate kinase OS=Acinetobacter bau... [more]
NDK_ACIBT1.807e-1542.11Nucleoside diphosphate kinase OS=Acinetobacter bau... [more]
NDK_ACIBS1.807e-1542.11Nucleoside diphosphate kinase OS=Acinetobacter bau... [more]
NDK_ACIBC1.807e-1542.11Nucleoside diphosphate kinase OS=Acinetobacter bau... [more]
NDK_ACIB51.807e-1542.11Nucleoside diphosphate kinase OS=Acinetobacter bau... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-016-D09-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736446 ID=EY736446; Name=EY736446; organism=Citrus sinensis; type=EST; length=787bp
TAGGTCACCACGCGTCCGCTCAAAATTTGGTTTTCATATTTATTTATTTC
TTCATTGCTTCTGTATTAAGGTTTCAACAGTGGGAACTTTTGAAATGATT
CTTCGTGTTGTTGGGCTCTTCATTTTGGCCTGCATCTCTTCTCCCTGCAG
GTCTTTGAGCAATGGAAGTGTGGAAAAGGAGAAAACATTGGCTATGATAA
AGCCTGATGGATTGTCTGGTAACTACACTGATGAAATCAAAAAGGTGATT
CTGGAGTCTGGTTTCAGTATTTTGAGGGAAAGAGTGGTTCGACTTGATGA
GGATGGGGCGAAAACCTTTTACGCTGAGCACTCTTCAAGGAGCTTTTTTT
CTAGTCTTATCAAGTACATGACGAGTGGTCCAGTTTTAGCTATGGTTTTG
GAGAAGGAAAATGCCATTACTGATTGGCGTGCTTTGATTGGACCAACTGA
TGCAAAAAAGGCTANAATTTCTCATCCACACAGGTTATATGTGCTCCCAT
TTGGATAAATGTGTACTTGGTTATTATATAAACAGTTTGTGAGATTGACT
TACCTTTGTCACTGTACTTTTCTTTTGTGGCTGGTGATTTCTTGTCCATG
TTCCCTTGAATACTTCCACCATTAGGGCCATGTTCGGCTTGGATTCAGAA
AACAATTGTGTTCATGGGTTCTGACTCTCCGTGAGCGGCCCGAGGAGAGA
TGTCTTTTTTCTCTCAAGAGGTGTCTGCCCATGAGGTGAGGTGAAACAAT
GACTGGTGGGTGGGAAGCCCTTGAAGAAGAGCATGGG
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