EY736446

Overview
NameEY736446
Unique NameEY736446
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length787
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_ACIB3 (Nucleoside diphosphate kinase OS=Acinetobacter baumannii (strain AB307-0294) GN=ndk PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.807e-15
Identity = 40/95 (42.11%), Postives = 61/95 (64.21%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            E+TL+++KPD +S N+  EI     ++G  I+  ++  L +  A+ FYAEH  R FF  L+ +MTSGPV+  VLE ENA+   R ++G T+ K+A
Sbjct:    4 ERTLSIVKPDAVSKNHIGEIFARFEKAGLKIVATKMKHLSQADAEGFYAEHKERGFFGDLVAFMTSGPVVVSVLEGENAVLAHREILGATNPKEA 98          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK7_HUMAN (Nucleoside diphosphate kinase 7 OS=Homo sapiens GN=NME7 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.807e-15
Identity = 38/93 (40.86%), Postives = 67/93 (72.04%), Query Frame = 2
Query:  176 KEKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDA 454
            KEKTLA+IKPD +S     EI ++I ++GF+I + +++ L    A  F+ +H SR FF+ LI+++T+GP++AM + +++AI +W+ L+GP ++
Sbjct:   91 KEKTLALIKPDAISK--AGEIIEIINKAGFTITKLKMMMLSRKEALDFHVDHQSRPFFNELIQFITTGPIIAMEILRDDAICEWKRLLGPANS 181          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_VIBFM (Nucleoside diphosphate kinase OS=Vibrio fischeri (strain MJ11) GN=ndk PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.360e-15
Identity = 38/95 (40.00%), Postives = 62/95 (65.26%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            E+T +++KPD +  N    I + I ++G  I+  +++RL ++ A+ FYAEH  + FF  L+ YM SGPV+  VLE ENA+  +R L+G T+ ++A
Sbjct:    4 ERTFSIVKPDAVKRNLIGAIYRRIEKTGMQIVAAKMLRLTKEQAEGFYAEHEGKEFFDELVAYMMSGPVMVQVLEGENAVVRYRELMGKTNPEEA 98          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_VIBF1 (Nucleoside diphosphate kinase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=ndk PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.360e-15
Identity = 38/95 (40.00%), Postives = 62/95 (65.26%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            E+T +++KPD +  N    I + I ++G  I+  +++RL ++ A+ FYAEH  + FF  L+ YM SGPV+  VLE ENA+  +R L+G T+ ++A
Sbjct:    4 ERTFSIVKPDAVKRNLIGAIYRRIEKTGMQIVAAKMLRLTKEQAEGFYAEHEGKEFFDELVAYMMSGPVMVQVLEGENAVVRYRELMGKTNPEEA 98          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_SHEFN (Nucleoside diphosphate kinase OS=Shewanella frigidimarina (strain NCIMB 400) GN=ndk PE=3 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 2.360e-15
Identity = 39/95 (41.05%), Postives = 63/95 (66.32%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            E+T ++IKPD ++ N+   I      +G  I+  ++V+L ++ A+ FYAEHS+R FF +L+ +MTSGPV+  VLE ENA+   R ++G T+  +A
Sbjct:    4 ERTFSIIKPDAVAKNHIGAIYNRFESAGLKIIASKMVQLSKEQAEGFYAEHSARPFFGALVSFMTSGPVMVQVLEGENAVLANREIMGATNPAEA 98          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_PELPB (Nucleoside diphosphate kinase OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=ndk PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.360e-15
Identity = 39/104 (37.50%), Postives = 63/104 (60.58%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAXISHPHRLY 490
            E+TL ++KPD +       +   I  +GF ++  + +RL ++ A  FYA H  R F+  L+++M+SGP + ++LEKENA+ D+R LIG TD  +A      +LY
Sbjct:    2 ERTLTILKPDCVRKQLIGAVIDQIERAGFRVVAMKKIRLTQETAGEFYAVHRERPFYGELVEFMSSGPCVPIILEKENAVADFRTLIGATDPAQADAGTVRKLY 105          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_HERAR (Nucleoside diphosphate kinase OS=Herminiimonas arsenicoxydans GN=ndk PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.360e-15
Identity = 43/95 (45.26%), Postives = 59/95 (62.11%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            E+TL++IKPD ++ N   +I      +G  I+  R+ +L    A+ FYA HS+R FF  L+ +M SGPV+  VLE ENAI   R L+G TD KKA
Sbjct:    4 ERTLSIIKPDAVAKNVIGQIYSRFEGAGLKIIAARMAQLSRAEAEGFYAVHSARPFFKDLVDFMISGPVMIQVLEGENAIAKHRDLMGATDPKKA 98          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_FLAPJ (Nucleoside diphosphate kinase OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=ndk PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.360e-15
Identity = 39/108 (36.11%), Postives = 63/108 (58.33%), Query Frame = 2
Query:  182 KTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKAXISHPHRLYVLPFG 505
            +T  MIKPDG+   +   I  +I E+GF I+  ++ +L    A+ FY  H++R F+  L+ +M+ GP++A +LEK+NA+ D+R LIG T+   A      + Y    G
Sbjct:    5 RTFTMIKPDGVQNGHIGGIVNMITEAGFKIVSMKLTQLTVADAQKFYEVHAARPFYGELVAFMSRGPIVAAILEKDNAVEDFRTLIGATNPADAAEGTIRKKYATSIG 112          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_EHRCR (Nucleoside diphosphate kinase OS=Ehrlichia chaffeensis (strain Arkansas) GN=ndk PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.360e-15
Identity = 41/95 (43.16%), Postives = 61/95 (64.21%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            EKTL+++KPD +  N T ++   I  SG  I+ +++  L    A+ FYA H S+ FF  LI +M SGP++  VL+ ENAI+ +R ++G TD KKA
Sbjct:    3 EKTLSILKPDVIKRNITGQVNSYIENSGLKIIIQKMCLLTRCQAEEFYAIHKSQHFFVPLIDFMVSGPIIVQVLQGENAISLYREIMGATDPKKA 97          
BLAST of EY736446 vs. ExPASy Swiss-Prot
Match: NDK_CAMC5 (Nucleoside diphosphate kinase OS=Campylobacter curvus (strain 525.92) GN=ndk PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.360e-15
Identity = 42/95 (44.21%), Postives = 61/95 (64.21%), Query Frame = 2
Query:  179 EKTLAMIKPDGLSGNYTDEIKKVILESGFSILRERVVRLDEDGAKTFYAEHSSRSFFSSLIKYMTSGPVLAMVLEKENAITDWRALIGPTDAKKA 463
            ++TL++IKPD +  N   +I      +G  I   + V+L +  AK FYA HS R FF+ L+++MTSGPV+ MVLE ENA+   R L+G T+ K+A
Sbjct:    2 QRTLSIIKPDAVKKNVVGKIIDRFESNGLRIAAAKKVKLSKCDAKAFYAVHSERPFFNDLVEFMTSGPVVVMVLEGENAVAKNRELMGATNPKEA 96          
The following BLAST results are available for this feature:
BLAST of EY736446 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK_ACIB31.807e-1542.11Nucleoside diphosphate kinase OS=Acinetobacter bau... [more]
NDK7_HUMAN1.807e-1540.86Nucleoside diphosphate kinase 7 OS=Homo sapiens GN... [more]
NDK_VIBFM2.360e-1540.00Nucleoside diphosphate kinase OS=Vibrio fischeri (... [more]
NDK_VIBF12.360e-1540.00Nucleoside diphosphate kinase OS=Vibrio fischeri (... [more]
NDK_SHEFN2.360e-1541.05Nucleoside diphosphate kinase OS=Shewanella frigid... [more]
NDK_PELPB2.360e-1537.50Nucleoside diphosphate kinase OS=Pelodictyon phaeo... [more]
NDK_HERAR2.360e-1545.26Nucleoside diphosphate kinase OS=Herminiimonas ars... [more]
NDK_FLAPJ2.360e-1536.11Nucleoside diphosphate kinase OS=Flavobacterium ps... [more]
NDK_EHRCR2.360e-1543.16Nucleoside diphosphate kinase OS=Ehrlichia chaffee... [more]
NDK_CAMC52.360e-1544.21Nucleoside diphosphate kinase OS=Campylobacter cur... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-016-D09-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736446 ID=EY736446; Name=EY736446; organism=Citrus sinensis; type=EST; length=787bp
TAGGTCACCACGCGTCCGCTCAAAATTTGGTTTTCATATTTATTTATTTC
TTCATTGCTTCTGTATTAAGGTTTCAACAGTGGGAACTTTTGAAATGATT
CTTCGTGTTGTTGGGCTCTTCATTTTGGCCTGCATCTCTTCTCCCTGCAG
GTCTTTGAGCAATGGAAGTGTGGAAAAGGAGAAAACATTGGCTATGATAA
AGCCTGATGGATTGTCTGGTAACTACACTGATGAAATCAAAAAGGTGATT
CTGGAGTCTGGTTTCAGTATTTTGAGGGAAAGAGTGGTTCGACTTGATGA
GGATGGGGCGAAAACCTTTTACGCTGAGCACTCTTCAAGGAGCTTTTTTT
CTAGTCTTATCAAGTACATGACGAGTGGTCCAGTTTTAGCTATGGTTTTG
GAGAAGGAAAATGCCATTACTGATTGGCGTGCTTTGATTGGACCAACTGA
TGCAAAAAAGGCTANAATTTCTCATCCACACAGGTTATATGTGCTCCCAT
TTGGATAAATGTGTACTTGGTTATTATATAAACAGTTTGTGAGATTGACT
TACCTTTGTCACTGTACTTTTCTTTTGTGGCTGGTGATTTCTTGTCCATG
TTCCCTTGAATACTTCCACCATTAGGGCCATGTTCGGCTTGGATTCAGAA
AACAATTGTGTTCATGGGTTCTGACTCTCCGTGAGCGGCCCGAGGAGAGA
TGTCTTTTTTCTCTCAAGAGGTGTCTGCCCATGAGGTGAGGTGAAACAAT
GACTGGTGGGTGGGAAGCCCTTGAAGAAGAGCATGGG
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