EY736415

Overview
NameEY736415
Unique NameEY736415
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length880
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY736415 vs. ExPASy Swiss-Prot
Match: HLDE_PSEHT (Bifunctional protein hldE OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=hldE PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.479e-11
Identity = 40/97 (41.24%), Postives = 59/97 (60.82%), Query Frame = 1 
Query:  289 VYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDAEIIANKGP--PVTPLHERMIMVNAVKWVDEVISDAPYAITKDFMKKLFDEYNIDYIIHGDD 573
            V+ +GCFD++H GH   L QA+A GD+LVVG+ +DA I   KG   P+ PL ER ++++A+  VD VI     A   D   KL ++ + D ++ G D
Sbjct:  345 VFTNGCFDILHAGHVRYLAQAKARGDRLVVGLNNDASISRLKGADRPINPLDERAMVLSALSSVDWVIPFGS-ADENDTPAKLIEQISPDILVKGGD 440
The following BLAST results are available for this feature:
BLAST of EY736415 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
HLDE_PSEHT2.479e-1141.24Bifunctional protein hldE OS=Pseudoalteromonas hal... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-016-A09-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736415 ID=EY736415; Name=EY736415; organism=Citrus sinensis; type=EST; length=880bp
CACGCGTCCGGGGGAAGACAAAAGAAGGGCATCCGATATTAGTGGAAAGC
AAAAGAAACCACGGAATGGGAATTGGAATGGAATAGAAGTGATTGATATT
TTGCAGTTGGATTTCATAAAGGAAAAAAAATGATATCGGAGGGAAAGGAA
CAGTCAGCACGGATATTGGCGACGTGCTTAATTGCCGGAGCCGTGATGGT
GGCCGGATTTTCGTTGTTAACTCTCTACTTAGCAGCTCCAAATGACAGGT
GGTTACAATGGACTAGAAAGAAGAAGAAGCCGGTACGGGTTTACATGGAC
GGTTGCTTCGACATGATGCACTACGGCCATTGCAACGCGCTCCGTCAGGC
GCGTGCCCTTGGGGATCAGTTGGTGGTGGGTGTTGTTAGCGATGCCGAAA
TCATCGCCAACAAGGGGCCACCCGTGACCCCTCTTCACGAGAGGATGATT
ATGGTGAATGCTGTCAAATGGGTCGATGAGGTCATCTCCGATGCGCCTTA
TGCCATAACCAAAGATTTTATGAAGAAACTGTTTGATGAGTACAACATCG
ATTACATTATTCACGGGGACGATCCTTGTGTGCTTCCTGATGGAACTGAT
GGCTACGAACTTGACCAAGAAGGGTGGTCGCTACGAGCAGATGAAGCGTC
CCCGAAGGTGTCTCCAGCCCGGATATTGTTGGTCGGATGCGTCTCTGCGT
CGCAAACAGATCCATTTCCCCCCGGCCCGATCACGCCCTCGTGCAGGAGC
GAGGCAGCCGCGGGCGCACCAGAAACTGTAAGAACCCCGATCGTGGGGGA
CGCGGTTCGCCCGAGGGCCGCGGGGTCGCGAGCAACGGTCCACGCCGCGA
TGTGGAGGGGACTGGGAGCGGTGCCGGGAC
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