EY736386

Overview
NameEY736386
Unique NameEY736386
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length870
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736386 vs. ExPASy Swiss-Prot
Match: E4PD_ERWCT (D-erythrose-4-phosphate dehydrogenase OS=Erwinia carotovora subsp. atroseptica GN=epd PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 1.967e-11
Identity = 46/138 (33.33%), Postives = 70/138 (50.72%), Query Frame = 1
Query:  358 KVGINGFGRIGR--LXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTIKVVDDSTLEINGKLIKVFSKRDPAEIPWGD*GVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSA---DAPMFVVGVN 756
            ++ INGFGRIGR  L                 +    A+ MA++ KYDS+HG F   ++   D  L +    I++  + +  ++PW +  VD V++ SGV+ +     AH+  GAKKV+ S P     DA + V GVN
Sbjct:    4 RIAINGFGRIGRSVLRALYESGRRAEITVVAINELASAEGMAHLLKYDSSHGRFSWDVRQECDQ-LYVGDDDIRLLHQVEIQQLPWRELSVDIVLDCSGVYGSREDGEAHLAAGAKKVLFSHPGTTDLDATV-VFGVN 139          

HSP 2 Score: 22.7126 bits (47), Expect = 1.967e-11
Identity = 8/19 (42.11%), Postives = 13/19 (68.42%), Query Frame = 3
Query:  765 IQANMNIVSNGKCTTNGLL 821
            +++   IVSN  CTTN ++
Sbjct:  143 LESGHRIVSNASCTTNCII 161          
BLAST of EY736386 vs. ExPASy Swiss-Prot
Match: E4PD_KLEP3 (D-erythrose-4-phosphate dehydrogenase OS=Klebsiella pneumoniae (strain 342) GN=epd PE=3 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 3.315e-11
Identity = 43/139 (30.94%), Postives = 71/139 (51.08%), Query Frame = 1
Query:  358 KVGINGFGRIGR--LXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTIKVVDDSTLEINGKLIKVFSKRDPAEIPWGD*GVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSA---DAPMFVVGVNE 759
            ++ INGFGRIGR  +                 +   DA  +A++ KYD++HG F   ++  +   L +    I++  +   A +PW +  VD V++ +GV+ +     AH++ GAKKV+ S P     DA + V GVN+
Sbjct:    4 RIAINGFGRIGRNVVRALYESGRRAEITVVAINELADAAGIAHLLKYDTSHGRFAWDVRQ-EREQLFVGDDAIRLLHEPTIAALPWRELAVDVVLDCTGVYGSREHGEAHLQAGAKKVLFSHPGGNDLDATV-VYGVNQ 140          

HSP 2 Score: 24.2534 bits (51), Expect = 3.315e-11
Identity = 9/20 (45.00%), Postives = 14/20 (70.00%), Query Frame = 3
Query:  762 DIQANMNIVSNGKCTTNGLL 821
            +++A   IVSN  CTTN ++
Sbjct:  142 ELRAEHRIVSNASCTTNCII 161          
BLAST of EY736386 vs. ExPASy Swiss-Prot
Match: E4PD_PSEA6 (D-erythrose-4-phosphate dehydrogenase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=epd PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.156e-11
Identity = 43/143 (30.07%), Postives = 73/143 (51.05%), Query Frame = 1
Query:  358 KVGINGFGRIGR--LXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTIKVVDDSTLEINGKLIKVFSKRDPAEIPWGD*GVDYVVESSGVFTTIAKASAHMKGGAKKVVIS---APSADAPMFVVGVNEKTYK 771
            +V INGFGR+GR  L                 +   + + +A++ KYD+ HG F+  + V+D+  L + G  I +  + +  ++PW    +D V+E +GV         H+  GAKKV+ S    P  DA + ++G+NE++ K
Sbjct:    3 RVAINGFGRVGRNVLRALYETGQNKQIQIVAINELAEPEGVAHLLKYDTAHGRFRFPV-VLDNQQLVVAGDHITLLQQENIRDLPWAQLDIDVVLECTGVNNERVHGEQHIAQGAKKVLFSQPCGPDVDATI-IMGINEESLK 143          
BLAST of EY736386 vs. ExPASy Swiss-Prot
Match: E4PD_KLEP7 (D-erythrose-4-phosphate dehydrogenase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=epd PE=3 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 4.303e-11
Identity = 43/139 (30.94%), Postives = 71/139 (51.08%), Query Frame = 1
Query:  358 KVGINGFGRIGR--LXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTIKVVDDSTLEINGKLIKVFSKRDPAEIPWGD*GVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSA---DAPMFVVGVNE 759
            ++ INGFGRIGR  +                 +   DA  +A++ KYD++HG F   ++  +   L +    I++  +   A +PW +  VD V++ +GV+ +     AH++ GAKKV+ S P     DA + V GVN+
Sbjct:    4 RIAINGFGRIGRNVVRALYESGRRAEITVVAINELADAAGIAHLLKYDTSHGRFAWDVRQ-EREQLFVGDDSIRLLHEPTIAALPWRELAVDVVLDCTGVYGSREHGEAHLQAGAKKVLFSHPGGNDLDATV-VYGVNQ 140          

HSP 2 Score: 24.2534 bits (51), Expect = 4.303e-11
Identity = 9/20 (45.00%), Postives = 14/20 (70.00%), Query Frame = 3
Query:  762 DIQANMNIVSNGKCTTNGLL 821
            +++A   IVSN  CTTN ++
Sbjct:  142 ELRAGHRIVSNASCTTNCII 161          
BLAST of EY736386 vs. ExPASy Swiss-Prot
Match: E4PD_VIBFM (D-erythrose-4-phosphate dehydrogenase OS=Vibrio fischeri (strain MJ11) GN=epd PE=3 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 4.304e-11
Identity = 47/148 (31.76%), Postives = 70/148 (47.30%), Query Frame = 1
Query:  358 KVGINGFGRIGR--LXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTIKVVDDSTLEI---NGKL--IKVFSKRDPAEIPWGD*GVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSAD--APMFVVGVNEKTYKP 774
            +V INGFGRIGR  L                 +     + MA++F+YDSTHG F+  +   D   L I   NG    +++  + D + +PW    VD +++ +GV+ + A    H+  GAKKV+ S P         + GVN  T  P
Sbjct:    3 RVAINGFGRIGRSVLRALYESDKRDKIEVVAVNELSQPEAMAHLFQYDSTHGRFQHKV-THDQEYLYIDLPNGSQDKVRILHQADLSLLPWQSLEVDLILDCTGVYGSKADGEKHINAGAKKVLFSHPGGSDLDNTIIYGVNHDTLLP 149          

HSP 2 Score: 23.8682 bits (50), Expect = 4.304e-11
Identity = 9/13 (69.23%), Postives = 11/13 (84.62%), Query Frame = 3
Query:  783 IVSNGKCTTNGLL 821
            IVSNG CTTN ++
Sbjct:  153 IVSNGSCTTNCII 165          
BLAST of EY736386 vs. ExPASy Swiss-Prot
Match: E4PD_VIBPA (D-erythrose-4-phosphate dehydrogenase OS=Vibrio parahaemolyticus GN=epd PE=3 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 7.247e-11
Identity = 47/147 (31.97%), Postives = 72/147 (48.98%), Query Frame = 1
Query:  358 KVGINGFGRIGR--LXXXXXXXXXXXXXXXXNDPFIDAKYMAYMFKYDSTHGVFKGTIKVVDDSTLEINGK-----LIKVFSKRDPAEIPWGD*GVDYVVESSGVFTTIAKASAHMKGGAKKVVISAPSAD--APMFVVGVNEKTYK 771
            KV INGFGRIGR  L                 +     + MA++ +YD++HG F   I   D   L ++ +      I++    +   +PW D  VD V++ +GV+ + A   AH++ GAKKV+ S P A+      + GVN +T K
Sbjct:    3 KVAINGFGRIGRNVLRAVYESGKHQQIKVVAVNELAQPEAMAHLLQYDTSHGRFGKKISH-DQEHLNVHHESGEYDAIRILHLSEIELLPWRDLEVDIVLDCTGVYGSKADGLAHIEAGAKKVLFSHPGANDLDNTIIYGVNHETLK 148          

HSP 2 Score: 23.0978 bits (48), Expect = 7.247e-11
Identity = 8/10 (80.00%), Postives = 9/10 (90.00%), Query Frame = 3
Query:  783 IVSNGKCTTN 812
            +VSNG CTTN
Sbjct:  153 VVSNGSCTTN 162          
The following BLAST results are available for this feature:
BLAST of EY736386 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 336
Match NameE-valueIdentityDescription
E4PD_ERWCT1.967e-1133.33D-erythrose-4-phosphate dehydrogenase OS=Erwinia c... [more]
E4PD_KLEP33.315e-1130.94D-erythrose-4-phosphate dehydrogenase OS=Klebsiell... [more]
E4PD_PSEA64.156e-1130.07D-erythrose-4-phosphate dehydrogenase OS=Pseudoalt... [more]
E4PD_KLEP74.303e-1130.94D-erythrose-4-phosphate dehydrogenase OS=Klebsiell... [more]
E4PD_VIBFM4.304e-1131.76D-erythrose-4-phosphate dehydrogenase OS=Vibrio fi... [more]
E4PD_VIBPA7.247e-1131.97D-erythrose-4-phosphate dehydrogenase OS=Vibrio pa... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-015-F11-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736386 ID=EY736386; Name=EY736386; organism=Citrus sinensis; type=EST; length=870bp
CACGCGTCCGCGAAAGCCGCAACAACCCAAACCTCGTTAGGGTTTTTGCG
AGAAGAGAGCTCGAAACAGTGTGCTTAAGCTCAACAAATGGCCTTCTCTT
CTCTCCTCAGATCTACGGCCTCCGCTTCTCTCGTCCGCGCCGACCTCACT
TCCTCGCCGTCCGATCGCGTCAAGGGATCATCGACTGCTGCTTTCAGTCG
CAACCTTAACACTTCGAGCATTTTCGGTACTTCAGTTCCAAGTGGTTCAT
CTTCTTCATCACTACAGACATGTGCTGCAAAGAGTATTCAACCCATCAGA
GCCACAGCTACTGAAATTCCTCCAACAATTCAAAAATCACGGAGTGATGG
AAACACAAAGGTCGGAATCAATGGTTTTGGTCGGATTGGAAGGTTGGTTT
TGCGAGTAGCAGCCTTCAGGGATGATGTTGACGTTGTGGCGGTCAATGAT
CCTTTTATTGATGCCAAATACATGGCTTACATGTTTAAGTATGATTCTAC
TCATGGAGTTTTCAAGGGAACCATCAAGGTCGTGGATGACTCCACCTTAG
AAATTAATGGGAAGCTGATTAAAGTTTTCAGCAAAAGGGACCCGGCAGAG
ATCCCTTGGGGTGACTAGGGGGTTGATTATGTTGTTGAATCTTCTGGAGT
CTTTACAACAATTGCGAAGGCTTCAGCTCACATGAAGGGTGGTGCAAAAA
AGGTGGTAATATCAGCTCCATCAGCTGATGCACCAATGTTTGTGGTAGGA
GTGAATGAAAAGACATACAAGCCAACATGAACATTGTTTCTAATGGCAAG
TGTACAACCAATGGCTTGCTCCTCCTTGCAAGGGGGTTCAGGAGGAGTTT
GGAATTCTGGAAGGCGTAAG
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