EY736345

Overview
NameEY736345
Unique NameEY736345
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736345 vs. ExPASy Swiss-Prot
Match: ADHB_MYCTU (Alcohol dehydrogenase B OS=Mycobacterium tuberculosis GN=adhB PE=3 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 2.057e-21
Identity = 63/222 (28.38%), Postives = 106/222 (47.75%), Query Frame = 1
Query:  220 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSXGVGAAWRTANVEVGSTVVIFGLGFIGLPVAEGARLCGCSRIIGVDVI 882
            ++ + A+     +P  ++E+ +  P   EV++++    +C SD       D P A FP + GHE                     +  F+  C +C  C++   NLC      ++     D + R +  RG+ ++    + +FS Y V+  + VVK+DP+VP   ACL+ CGV+ G G+A RTA+V  G  V I GLG +G+   +GA   G   +  V+ +
Sbjct:    1 MKTKGALIWEFNQPWSVEEIEIGDPRKDEVKIQMEAAGMCRSDHHL-VTGDIPMAGFPVLGGHEGAGIVTEVGPGVDDFAPGDHVVLAFIPSCGKCPSCQAGMRNLCDLGAGLLAGESVTDGSFRIQ-ARGQNVYPMTLLGTFSPYMVVHRSSVVKIDPSVPFEVACLVGCGVTTGYGSAVRTADVRPGDDVAIVGLGGVGMAALQGAVSAGARYVFAVEPV 220          
BLAST of EY736345 vs. ExPASy Swiss-Prot
Match: ADHB_MYCBO (Alcohol dehydrogenase B OS=Mycobacterium bovis GN=adhB PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.057e-21
Identity = 63/222 (28.38%), Postives = 106/222 (47.75%), Query Frame = 1
Query:  220 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSXGVGAAWRTANVEVGSTVVIFGLGFIGLPVAEGARLCGCSRIIGVDVI 882
            ++ + A+     +P  ++E+ +  P   EV++++    +C SD       D P A FP + GHE                     +  F+  C +C  C++   NLC      ++     D + R +  RG+ ++    + +FS Y V+  + VVK+DP+VP   ACL+ CGV+ G G+A RTA+V  G  V I GLG +G+   +GA   G   +  V+ +
Sbjct:    1 MKTKGALIWEFNQPWSVEEIEIGDPRKDEVKIQMEAAGMCRSDHHL-VTGDIPMAGFPVLGGHEGAGIVTEVGPGVDDFAPGDHVVLAFIPSCGKCPSCQAGMRNLCDLGAGLLAGESVTDGSFRIQ-ARGQNVYPMTLLGTFSPYMVVHRSSVVKIDPSVPFEVACLVGCGVTTGYGSAVRTADVRPGDDVAIVGLGGVGMAALQGAVSAGARYVFAVEPV 220          
BLAST of EY736345 vs. ExPASy Swiss-Prot
Match: FADH_AMYME (NAD/mycothiol-dependent formaldehyde dehydrogenase OS=Amycolatopsis methanolica PE=1 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 1.021e-20
Identity = 64/221 (28.96%), Postives = 100/221 (45.25%), Query Frame = 1
Query:  217 PIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLC-SAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSXGVGAAWRTANVEVGSTVVIFGLGFIGLPVAEGARLCGCSRIIGVD 876
            P   R  IA + G P+ + ++++  P   EV   I   ++CH+D+T+ +       FP +LGHEA                    + ++ A C +C  C+  +   C S F          + T +     G  +   + + +F++ T++      KVDP   P  A LL CGV  G+GAA  T  V  G +V + G G +G  V  GARL G ++II VD
Sbjct:    1 PQTVRGVIARSKGAPVELTDIVIPDPGPSEVTALIATCAVCHTDLTY-REGGINDEFPFLLGHEAAGTVESVGEGVDSVQPGDYVVLNWRAVCGQCRACKRGRPQYCFSTF----------NATQKMTLTDGTELTPALGIGAFADKTLVHAGQCTKVDPAADPAVAGLLGCGVMAGLGAAVNTGAVSRGDSVAVIGCGAVGDAVIAGARLAGANKIIAVD 210          
BLAST of EY736345 vs. ExPASy Swiss-Prot
Match: XYLB_PSEPU (Aryl-alcohol dehydrogenase OS=Pseudomonas putida GN=xylB PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.945e-17
Identity = 63/224 (28.12%), Postives = 94/224 (41.96%), Query Frame = 1
Query:  220 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP-WMPRDQTSR--FKDLRGETIH-HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSXGVGAAWRTANVEVGSTVVIFGLGFIGLPVAEGARLCGCSRIIGVDV 879
            ++ +AAI      P +++ V ++ P   +V VR++ T LCH+D+   + + +P   P + GHE                     +  F   C  C  C S     C+       P +M R  T      D +G  +   F   SSF+ Y +    + VKV   VP      L CG+  G G+     N   GS + IFG G +GL     A + GC+ II VDV
Sbjct:    1 MEIKAAIVRQKNGPFLLEHVALNEPAEDQVLVRLVATGLCHTDLVC-RDQHYPVPLPMVFGHEGAGVVERVGSAVKKVQPGDHVVLTFYT-CGSCDACLSGDPTSCAN---SFGPNFMGRSVTGECTIHDHQGAEVGASFFGQSSFATYALSYERNTVKVTKDVPLELLGPLGCGIQTGAGSVLNALNPPAGSAIAIFGAGAVGLSAVMAAVVAGCTTIIAVDV 219          
The following BLAST results are available for this feature:
BLAST of EY736345 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
ADHB_MYCTU2.057e-2128.38Alcohol dehydrogenase B OS=Mycobacterium tuberculo... [more]
ADHB_MYCBO2.057e-2128.38Alcohol dehydrogenase B OS=Mycobacterium bovis GN=... [more]
FADH_AMYME1.021e-2028.96NAD/mycothiol-dependent formaldehyde dehydrogenase... [more]
XYLB_PSEPU8.945e-1728.13Aryl-alcohol dehydrogenase OS=Pseudomonas putida G... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-015-B10-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736345 ID=EY736345; Name=EY736345; organism=Citrus sinensis; type=EST; length=888bp
CCACGCGTCCGTTTAAGTTTAATTTTTTTTTTTAAAAGACTCTTCAGTCT
TCACAATATATTAAAGGACTCACCAATGATGCCGAGTCAGTTGGTCTCAG
TTACTGCACCAGCCACCCTCTACTCACTCACTTTTCTTACAGGAAAAAGC
CAAAACAACTCTTAAACTATCTCCGGCATGGACATTGAGAAACCGTCGAA
TAAAACCGCCGGGAAACCAATTCAATGCAGAGCCGCAATCGCTACAGCTC
CAGGAGAGCCTCTGGTTATAGACGAGGTTATCGTCGACCCTCCAAATTCC
CACGAAGTTCGGGTTCGGATAATCTGTACTAGTCTCTGTCACAGTGACGT
CACCTTCTGGAAAATGAAGGATTTTCCAGCCGTGTTTCCAAGAATTCTCG
GTCACGAGGCTATCGGAGTTGTGGAGAGTGTTGGGGAGAATGTANATGGA
GTGGTTGAAGGAGACGTTGTCATCCCGCACTTTCTGGCAGATTGTACAGA
ATGTGTAGGTTGTAGATCAAAGAAGGGCAACCTATGTTCAGCATTTCCTT
TCAAGATCTCTCCTTGGATGCCAAGGGATCAGACAAGCAGATTCAAAGAC
CTCAGAGGAGAGACTATACACCATTTTGTCTCTGTTTCAAGTTTTTCTGA
GTATACTGTTCTAGATATTGCCCATGTAGTCAAAGTTGATCCTACAGTCC
CTCCAAATAGGGCTTGCCTTCTAAGCTGTGGAGTATCANCAGGCGTGGGA
GCTGCTTGGAGAACAGCAAATGTAGAGGTTGGATCAACTGTTGTTATATT
TGGGCTTGGGTTCATTGGATTACCGGTTGCAGAGGGAGCGAGATTATGTG
GGTGCTCAAGGATTATAGGCGTGGATGTGATCTCGGAA
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