EY736345

Overview
NameEY736345
Unique NameEY736345
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736345 vs. ExPASy Swiss-Prot
Match: FADH2_SCHPO (Putative S-(hydroxymethyl)glutathione dehydrogenase 2 OS=Schizosaccharomyces pombe GN=SPCC13B11.04c PE=2 SV=2)

HSP 1 Score: 160.614 bits (405), Expect = 1.086e-38
Identity = 90/228 (39.47%), Postives = 121/228 (53.07%), Query Frame = 1
Query:  205 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSXGVGAAWRTANVEVGSTVVIFGLGFIGLPVAEGARLCGCSRIIGVDVISE 888
            TAGK I C+AA+A  P  PL I+ V V PP  HEVR++I+ + +CH+D      KD   +FP ILGHE                     I  +  +C  C  C+S K NLC          +  D TSRF    G T+ HF+  S+FSEYTV+    VV ++   P +  CLL CG++ G GAA  TA+++ G +V +FGLG +GL V +GA      RI G+DV  E
Sbjct:    6 TAGKIINCKAAVAWQPAAPLSIENVQVFPPRVHEVRIKIVNSGVCHTDAYTLSGKDPEGLFPVILGHEGAGIVESVGPQVTTVQVGDPVIALYTPECKTCKFCKSGKTNLCGRIRTTQGKGLMPDGTSRFS-CNGNTLLHFMGCSTFSEYTVVADISVVAIERLAPLDSVCLLGCGITTGYGAATITADIKEGDSVAVFGLGSVGLAVIQGAVKKRAGRIFGIDVNPE 232          
BLAST of EY736345 vs. ExPASy Swiss-Prot
Match: ADH1E_HORSE (Alcohol dehydrogenase E chain OS=Equus caballus PE=1 SV=2)

HSP 1 Score: 160.614 bits (405), Expect = 1.086e-38
Identity = 88/225 (39.11%), Postives = 119/225 (52.89%), Query Frame = 1
Query:  205 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSXGVGAAWRTANVEVGSTVVIFGLGFIGLPVAEGARLCGCSRIIGVDV 879
            TAGK I+C+AA+     +P  I+EV V PP +HEVR++++ T +C SD             P I GHEA                    IP F   C +C  C+  +GN C      +     +D TSRF   RG+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ CG S G G+A + A V  GST  +FGLG +GL V  G +  G +RIIGVD+
Sbjct:    3 TAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSD-DHVVSGTLVTPLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDI 225          
BLAST of EY736345 vs. ExPASy Swiss-Prot
Match: FADH_CANMA (S-(hydroxymethyl)glutathione dehydrogenase OS=Candida maltosa GN=FDH1 PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.418e-38
Identity = 89/228 (39.04%), Postives = 122/228 (53.51%), Query Frame = 1
Query:  196 SNKTAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSXGVGAAWRTANVEVGSTVVIFGLGFIGLPVAEGARLCGCSRIIGVDV 879
            S  T GKPI C+AA+A    +PL I++V V PP  HEVR+++  T +CH+D       D    FP ILGHE                     I  +  +C EC  C+S K NLC          +  D TSRF   +G+ I HF+  S+FS+YTV+    VV ++P    ++ACLL CG++ G GAA  TANV+ G  V +FG G +GL V +G    G ++II VD+
Sbjct:    2 SESTVGKPITCKAAVAWEAAKPLSIEDVTVAPPKRHEVRIKLYDTGVCHTDAYTLSGVDPEGAFPVILGHEGAGIVESIGEGVTNVKVGDHVIALYTPECGECKFCKSGKTNLCGKIRATQGKGVMPDGTSRFT-CKGKEILHFMGCSTFSQYTVVADISVVAINPKAEFDKACLLGCGITTGYGAATITANVQKGDNVAVFGGGIVGLSVIQGCAERGAAQIILVDI 228          
BLAST of EY736345 vs. ExPASy Swiss-Prot
Match: ADH1S_HORSE (Alcohol dehydrogenase S chain OS=Equus caballus PE=1 SV=3)

HSP 1 Score: 159.458 bits (402), Expect = 2.419e-38
Identity = 92/229 (40.17%), Postives = 123/229 (53.71%), Query Frame = 1
Query:  205 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPR----DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSXGVGAAWRTANVEVGSTVVIFGLGFIGLPVAEGARLCGCSRIIGVDV 879
            TAGK I+C+AA+     +P  I+EV V PP +HEVR++++   +C SD          A  P I GHEA                    IP F+  C +C  C+  +GNLC       +  MPR    D TSRF   RG+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ CG S G G+A + A V  GST  +FGLG +GL V  G +  G +RIIGVD+
Sbjct:    3 TAGKVIKCKAAVLWEQKKPFSIEEVEVAPPKAHEVRIKMVAAGICRSD-DHVVSGTLVAPLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLCLK-----NLSMPRGTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDI 224          
BLAST of EY736345 vs. ExPASy Swiss-Prot
Match: FRMA_SHISS (S-(hydroxymethyl)glutathione dehydrogenase OS=Shigella sonnei (strain Ss046) GN=frmA PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 4.126e-38
Identity = 86/219 (39.27%), Postives = 118/219 (53.88%), Query Frame = 1
Query:  220 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSXGVGAAWRTANVEVGSTVVIFGLGFIGLPVAEGARLCGCSRIIGVD 876
            ++ RAA+A APG+PL I E+ V PP   EV +++  T +CH+D       D   VFP +LGHE                     IP + A+C EC  CRS K NLC A        +  D T+RF    G+ ++H++  S+FSEYTV+    + K++P       CLL CGV+ G+GA   TA V+ G +V +FGLG IGL V +GAR     RII +D
Sbjct:    1 MKSRAAVAFAPGKPLEIVEIDVAPPKKGEVLIKVTHTGVCHTDAFTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKGLMPDGTTRFS-YNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAID 218          
BLAST of EY736345 vs. ExPASy Swiss-Prot
Match: FRMA_ECOUT (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli (strain UTI89 / UPEC) GN=frmA PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 4.126e-38
Identity = 86/219 (39.27%), Postives = 118/219 (53.88%), Query Frame = 1
Query:  220 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSXGVGAAWRTANVEVGSTVVIFGLGFIGLPVAEGARLCGCSRIIGVD 876
            ++ RAA+A APG+PL I E+ V PP   EV +++  T +CH+D       D   VFP +LGHE                     IP + A+C EC  CRS K NLC A        +  D T+RF    G+ ++H++  S+FSEYTV+    + K++P       CLL CGV+ G+GA   TA V+ G +V +FGLG IGL V +GAR     RII +D
Sbjct:    1 MKSRAAVAFAPGKPLEIVEIDVAPPKKGEVLIKVTHTGVCHTDAFTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKGLMPDGTTRFS-YNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAID 218          
BLAST of EY736345 vs. ExPASy Swiss-Prot
Match: FRMA_ECOLI (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli (strain K12) GN=frmA PE=1 SV=3)

HSP 1 Score: 158.688 bits (400), Expect = 4.126e-38
Identity = 86/219 (39.27%), Postives = 118/219 (53.88%), Query Frame = 1
Query:  220 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSXGVGAAWRTANVEVGSTVVIFGLGFIGLPVAEGARLCGCSRIIGVD 876
            ++ RAA+A APG+PL I E+ V PP   EV +++  T +CH+D       D   VFP +LGHE                     IP + A+C EC  CRS K NLC A        +  D T+RF    G+ ++H++  S+FSEYTV+    + K++P       CLL CGV+ G+GA   TA V+ G +V +FGLG IGL V +GAR     RII +D
Sbjct:    1 MKSRAAVAFAPGKPLEIVEIDVAPPKKGEVLIKVTHTGVCHTDAFTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKGLMPDGTTRFS-YNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAID 218          
BLAST of EY736345 vs. ExPASy Swiss-Prot
Match: FRMA_ECOLC (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=frmA PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 4.126e-38
Identity = 86/219 (39.27%), Postives = 118/219 (53.88%), Query Frame = 1
Query:  220 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSXGVGAAWRTANVEVGSTVVIFGLGFIGLPVAEGARLCGCSRIIGVD 876
            ++ RAA+A APG+PL I E+ V PP   EV +++  T +CH+D       D   VFP +LGHE                     IP + A+C EC  CRS K NLC A        +  D T+RF    G+ ++H++  S+FSEYTV+    + K++P       CLL CGV+ G+GA   TA V+ G +V +FGLG IGL V +GAR     RII +D
Sbjct:    1 MKSRAAVAFAPGKPLEIVEIDVAPPKKGEVLIKVTHTGVCHTDAFTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKGLMPDGTTRFS-YNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAID 218          
BLAST of EY736345 vs. ExPASy Swiss-Prot
Match: FRMA_ECOL5 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=frmA PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 4.126e-38
Identity = 86/219 (39.27%), Postives = 118/219 (53.88%), Query Frame = 1
Query:  220 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSXGVGAAWRTANVEVGSTVVIFGLGFIGLPVAEGARLCGCSRIIGVD 876
            ++ RAA+A APG+PL I E+ V PP   EV +++  T +CH+D       D   VFP +LGHE                     IP + A+C EC  CRS K NLC A        +  D T+RF    G+ ++H++  S+FSEYTV+    + K++P       CLL CGV+ G+GA   TA V+ G +V +FGLG IGL V +GAR     RII +D
Sbjct:    1 MKSRAAVAFAPGKPLEIVEIDVAPPKKGEVLIKVTHTGVCHTDAFTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKGLMPDGTTRFS-YNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAID 218          
BLAST of EY736345 vs. ExPASy Swiss-Prot
Match: FRMA_ECOK1 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O1:K1 / APEC GN=frmA PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 4.126e-38
Identity = 86/219 (39.27%), Postives = 118/219 (53.88%), Query Frame = 1
Query:  220 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSXGVGAAWRTANVEVGSTVVIFGLGFIGLPVAEGARLCGCSRIIGVD 876
            ++ RAA+A APG+PL I E+ V PP   EV +++  T +CH+D       D   VFP +LGHE                     IP + A+C EC  CRS K NLC A        +  D T+RF    G+ ++H++  S+FSEYTV+    + K++P       CLL CGV+ G+GA   TA V+ G +V +FGLG IGL V +GAR     RII +D
Sbjct:    1 MKSRAAVAFAPGKPLEIVEIDVAPPKKGEVLIKVTHTGVCHTDAFTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKGLMPDGTTRFS-YNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAID 218          
The following BLAST results are available for this feature:
BLAST of EY736345 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
FADH2_SCHPO1.086e-3839.47Putative S-(hydroxymethyl)glutathione dehydrogenas... [more]
ADH1E_HORSE1.086e-3839.11Alcohol dehydrogenase E chain OS=Equus caballus PE... [more]
FADH_CANMA1.418e-3839.04S-(hydroxymethyl)glutathione dehydrogenase OS=Cand... [more]
ADH1S_HORSE2.419e-3840.17Alcohol dehydrogenase S chain OS=Equus caballus PE... [more]
FRMA_SHISS4.126e-3839.27S-(hydroxymethyl)glutathione dehydrogenase OS=Shig... [more]
FRMA_ECOUT4.126e-3839.27S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_ECOLI4.126e-3839.27S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_ECOLC4.126e-3839.27S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_ECOL54.126e-3839.27S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_ECOK14.126e-3839.27S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-015-B10-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736345 ID=EY736345; Name=EY736345; organism=Citrus sinensis; type=EST; length=888bp
CCACGCGTCCGTTTAAGTTTAATTTTTTTTTTTAAAAGACTCTTCAGTCT
TCACAATATATTAAAGGACTCACCAATGATGCCGAGTCAGTTGGTCTCAG
TTACTGCACCAGCCACCCTCTACTCACTCACTTTTCTTACAGGAAAAAGC
CAAAACAACTCTTAAACTATCTCCGGCATGGACATTGAGAAACCGTCGAA
TAAAACCGCCGGGAAACCAATTCAATGCAGAGCCGCAATCGCTACAGCTC
CAGGAGAGCCTCTGGTTATAGACGAGGTTATCGTCGACCCTCCAAATTCC
CACGAAGTTCGGGTTCGGATAATCTGTACTAGTCTCTGTCACAGTGACGT
CACCTTCTGGAAAATGAAGGATTTTCCAGCCGTGTTTCCAAGAATTCTCG
GTCACGAGGCTATCGGAGTTGTGGAGAGTGTTGGGGAGAATGTANATGGA
GTGGTTGAAGGAGACGTTGTCATCCCGCACTTTCTGGCAGATTGTACAGA
ATGTGTAGGTTGTAGATCAAAGAAGGGCAACCTATGTTCAGCATTTCCTT
TCAAGATCTCTCCTTGGATGCCAAGGGATCAGACAAGCAGATTCAAAGAC
CTCAGAGGAGAGACTATACACCATTTTGTCTCTGTTTCAAGTTTTTCTGA
GTATACTGTTCTAGATATTGCCCATGTAGTCAAAGTTGATCCTACAGTCC
CTCCAAATAGGGCTTGCCTTCTAAGCTGTGGAGTATCANCAGGCGTGGGA
GCTGCTTGGAGAACAGCAAATGTAGAGGTTGGATCAACTGTTGTTATATT
TGGGCTTGGGTTCATTGGATTACCGGTTGCAGAGGGAGCGAGATTATGTG
GGTGCTCAAGGATTATAGGCGTGGATGTGATCTCGGAA
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