EY736337

Overview
NameEY736337
Unique NameEY736337
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length860
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY736337 vs. ExPASy Swiss-Prot
Match: HIS1_RALEH (ATP phosphoribosyltransferase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=hisG PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.295e-22
Identity = 54/70 (77.14%), Postives = 62/70 (88.57%), Query Frame = 1 
Query:    1 IIKLYGSMELAPLVGLADCIVDLVSTGGTLRANDLVAVEDIMPISSRLIVNQAALKTRGERLQPLLDAFE 210
            +IKLYGSMEL PLVGL+D IVDLVSTG TLRAN+LV VE+I+ ISSRL+VNQAALK + ERL P+LDAFE
Sbjct:  148 LIKLYGSMELGPLVGLSDAIVDLVSTGSTLRANNLVEVEEIVQISSRLVVNQAALKLKRERLAPILDAFE 217
[Close]
BLAST of EY736337 vs. ExPASy Swiss-Prot
Match: HIS1_CUPTR (ATP phosphoribosyltransferase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=hisG PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.295e-22
Identity = 54/70 (77.14%), Postives = 62/70 (88.57%), Query Frame = 1 
Query:    1 IIKLYGSMELAPLVGLADCIVDLVSTGGTLRANDLVAVEDIMPISSRLIVNQAALKTRGERLQPLLDAFE 210
            +IKLYGSMEL PLVGL+D IVDLVSTG TLRAN+LV VE+I+ ISSRL+VNQAALK + ERL P+LDAFE
Sbjct:  148 LIKLYGSMELGPLVGLSDAIVDLVSTGSTLRANNLVEVEEIVQISSRLVVNQAALKLKRERLAPILDAFE 217
[Close]
BLAST of EY736337 vs. ExPASy Swiss-Prot
Match: HIS1_BURS3 (ATP phosphoribosyltransferase OS=Burkholderia sp. (strain 383) GN=hisG PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.295e-22
Identity = 54/70 (77.14%), Postives = 63/70 (90.00%), Query Frame = 1 
Query:    1 IIKLYGSMELAPLVGLADCIVDLVSTGGTLRANDLVAVEDIMPISSRLIVNQAALKTRGERLQPLLDAFE 210
            +IKLYGSMELAPLVGLAD IVDLVS+GGTL+AN+LV VE+IM ISSRL+VNQAALK +   L+P+LDAFE
Sbjct:  141 LIKLYGSMELAPLVGLADAIVDLVSSGGTLKANNLVEVEEIMAISSRLVVNQAALKLKRTALKPILDAFE 210
[Close]
BLAST of EY736337 vs. ExPASy Swiss-Prot
Match: HIS1_BURCM (ATP phosphoribosyltransferase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=hisG PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.295e-22
Identity = 54/70 (77.14%), Postives = 63/70 (90.00%), Query Frame = 1 
Query:    1 IIKLYGSMELAPLVGLADCIVDLVSTGGTLRANDLVAVEDIMPISSRLIVNQAALKTRGERLQPLLDAFE 210
            +IKLYGSMELAPLVGLAD IVDLVS+GGTL+AN+LV VE+IM ISSRL+VNQAALK +   L+P+LDAFE
Sbjct:  141 LIKLYGSMELAPLVGLADAIVDLVSSGGTLKANNLVEVEEIMAISSRLVVNQAALKLKRAALKPILDAFE 210
[Close]
BLAST of EY736337 vs. ExPASy Swiss-Prot
Match: HIS1_BURCJ (ATP phosphoribosyltransferase OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=hisG PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.295e-22
Identity = 54/70 (77.14%), Postives = 63/70 (90.00%), Query Frame = 1 
Query:    1 IIKLYGSMELAPLVGLADCIVDLVSTGGTLRANDLVAVEDIMPISSRLIVNQAALKTRGERLQPLLDAFE 210
            +IKLYGSMELAPLVGLAD IVDLVS+GGTL+AN+LV VE+IM ISSRL+VNQAALK +   L+P+LDAFE
Sbjct:  141 LIKLYGSMELAPLVGLADAIVDLVSSGGTLKANNLVEVEEIMAISSRLVVNQAALKLKRAALKPILDAFE 210
[Close]
BLAST of EY736337 vs. ExPASy Swiss-Prot
Match: HIS1_BURCH (ATP phosphoribosyltransferase OS=Burkholderia cenocepacia (strain HI2424) GN=hisG PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.295e-22
Identity = 54/70 (77.14%), Postives = 63/70 (90.00%), Query Frame = 1 
Query:    1 IIKLYGSMELAPLVGLADCIVDLVSTGGTLRANDLVAVEDIMPISSRLIVNQAALKTRGERLQPLLDAFE 210
            +IKLYGSMELAPLVGLAD IVDLVS+GGTL+AN+LV VE+IM ISSRL+VNQAALK +   L+P+LDAFE
Sbjct:  141 LIKLYGSMELAPLVGLADAIVDLVSSGGTLKANNLVEVEEIMAISSRLVVNQAALKLKRAALKPILDAFE 210
[Close]
BLAST of EY736337 vs. ExPASy Swiss-Prot
Match: HIS1_BURCC (ATP phosphoribosyltransferase OS=Burkholderia cenocepacia (strain MC0-3) GN=hisG PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.295e-22
Identity = 54/70 (77.14%), Postives = 63/70 (90.00%), Query Frame = 1 
Query:    1 IIKLYGSMELAPLVGLADCIVDLVSTGGTLRANDLVAVEDIMPISSRLIVNQAALKTRGERLQPLLDAFE 210
            +IKLYGSMELAPLVGLAD IVDLVS+GGTL+AN+LV VE+IM ISSRL+VNQAALK +   L+P+LDAFE
Sbjct:  141 LIKLYGSMELAPLVGLADAIVDLVSSGGTLKANNLVEVEEIMAISSRLVVNQAALKLKRAALKPILDAFE 210
[Close]
BLAST of EY736337 vs. ExPASy Swiss-Prot
Match: HIS1_BURCA (ATP phosphoribosyltransferase OS=Burkholderia cenocepacia (strain AU 1054) GN=hisG PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.295e-22
Identity = 54/70 (77.14%), Postives = 63/70 (90.00%), Query Frame = 1 
Query:    1 IIKLYGSMELAPLVGLADCIVDLVSTGGTLRANDLVAVEDIMPISSRLIVNQAALKTRGERLQPLLDAFE 210
            +IKLYGSMELAPLVGLAD IVDLVS+GGTL+AN+LV VE+IM ISSRL+VNQAALK +   L+P+LDAFE
Sbjct:  141 LIKLYGSMELAPLVGLADAIVDLVSSGGTLKANNLVEVEEIMAISSRLVVNQAALKLKRAALKPILDAFE 210
[Close]
BLAST of EY736337 vs. ExPASy Swiss-Prot
Match: HIS1_BURA4 (ATP phosphoribosyltransferase OS=Burkholderia ambifaria (strain MC40-6) GN=hisG PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.295e-22
Identity = 54/70 (77.14%), Postives = 63/70 (90.00%), Query Frame = 1 
Query:    1 IIKLYGSMELAPLVGLADCIVDLVSTGGTLRANDLVAVEDIMPISSRLIVNQAALKTRGERLQPLLDAFE 210
            +IKLYGSMELAPLVGLAD IVDLVS+GGTL+AN+LV VE+IM ISSRL+VNQAALK +   L+P+LDAFE
Sbjct:  141 LIKLYGSMELAPLVGLADAIVDLVSSGGTLKANNLVEVEEIMAISSRLVVNQAALKLKRAALKPILDAFE 210
[Close]
BLAST of EY736337 vs. ExPASy Swiss-Prot
Match: HIS1_AZOSB (ATP phosphoribosyltransferase OS=Azoarcus sp. (strain BH72) GN=hisG PE=3 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 2.295e-22
Identity = 55/69 (79.71%), Postives = 61/69 (88.41%), Query Frame = 1 
Query:    1 IIKLYGSMELAPLVGLADCIVDLVSTGGTLRANDLVAVEDIMPISSRLIVNQAALKTRGERLQPLLDAF 207
            +IKLYGSMELAPLVGLAD IVDLVSTG TLRAN+L  VEDI PISSRLIVNQA+LK + E +QP+LDAF
Sbjct:  140 LIKLYGSMELAPLVGLADAIVDLVSTGSTLRANNLEEVEDIAPISSRLIVNQASLKLKRELIQPVLDAF 208
The following BLAST results are available for this feature:
BLAST of EY736337 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 199
Match NameE-valueIdentityDescription
HIS1_RALEH2.295e-2277.14ATP phosphoribosyltransferase OS=Ralstonia eutroph... [more]
HIS1_CUPTR2.295e-2277.14ATP phosphoribosyltransferase OS=Cupriavidus taiwa... [more]
HIS1_BURS32.295e-2277.14ATP phosphoribosyltransferase OS=Burkholderia sp. ... [more]
HIS1_BURCM2.295e-2277.14ATP phosphoribosyltransferase OS=Burkholderia ambi... [more]
HIS1_BURCJ2.295e-2277.14ATP phosphoribosyltransferase OS=Burkholderia cepa... [more]
HIS1_BURCH2.295e-2277.14ATP phosphoribosyltransferase OS=Burkholderia ceno... [more]
HIS1_BURCC2.295e-2277.14ATP phosphoribosyltransferase OS=Burkholderia ceno... [more]
HIS1_BURCA2.295e-2277.14ATP phosphoribosyltransferase OS=Burkholderia ceno... [more]
HIS1_BURA42.295e-2277.14ATP phosphoribosyltransferase OS=Burkholderia ambi... [more]
HIS1_AZOSB2.295e-2279.71ATP phosphoribosyltransferase OS=Azoarcus sp. (str... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-705-015-A05-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736337 ID=EY736337; Name=EY736337; organism=Citrus sinensis; type=EST; length=860bp
ATCATCAAGCTGTATGGTTCGATGGAACTGGCGCCGCTGGTGGGCCTGGC
CGACTGCATCGTGGACCTGGTGTCCACCGGCGGCACGCTGCGCGCCAACG
ACCTGGTCGCGGTCGAGGACATCATGCCGATCTCCTCGCGCCTGATCGTC
AACCAGGCCGCGCTGAAGACCCGCGGCGAACGCCTGCAACCGCTGCTGGA
CGCTTTCGAGCGCGCCGCCTCCCGCAACGCCTGACCCAGGCCGCCGCCCC
GCGCGGCGTCCGCCACCCGCCTGAACGCCATGGCCCTGATCAATCGTCTC
GACTCCCGCGATCCCGGATTCGCATCCGCCCTGTCCAAGCTGCTGGCCTT
CGAGGCCACCGAGGACGAGTCCATCGACCGCGCCGCCGCCGGCATCCTGG
CCGACGTGCGGGCCCGCGGCGACGCCGCGCTGGTGGAATACACCCAGCGC
TTCGACCGCATGCCGCATGCGTCAGCGGACACGCTCGAAATCCCCAAGGC
CGACTGGCATGCGGCCCTGGTCGCGCTGGCGGCCGCCCAGCGCGACGCGC
TGCATGCCGCCGACGAGCGCGTGCGCCGCTACCAGGAGCGGCAGCGCTCC
GAGACCTGGACCTAGCCCGAAGGCCAAGGCCCGCTGCGGGGTCGGGGGGT
GAAGCCGGGTGTGCGGGTGGGGCCTGGAGGGGGGGGGGGGCGGGGGAGCT
TGGGGGCGGCCCGGGCGGCGGGGGCGGGGCCCCCGGTAACGGGCCCCGTG
CGCGCCAGCACCGCGCCCGGCCCCCCCCGCCCGGCGCGCGGCGCGCGGCC
GCCCGCCCCGCGCGGCGCCGGATTGCCCCCACTGCGTCGCCGTGGGGGGG
CGGGGGGGGG
back to top