EY736337

Overview
NameEY736337
Unique NameEY736337
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length860
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736337 vs. ExPASy Swiss-Prot
Match: HIS12_GEOSL (ATP phosphoribosyltransferase 2 OS=Geobacter sulfurreducens GN=hisG2 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.340e-16
Identity = 44/70 (62.86%), Postives = 56/70 (80.00%), Query Frame = 1
Query:    1 IIKLYGSMELAPLVGLADCIVDLVSTGGTLRANDLVAVEDIMPISSRLIVNQAALKTRGERLQPLLDAFE 210
            IIKLYGS+ELAPLVGL++ IVDLVSTG TLR N LV VE I  I++RLIVN+A+LKT+  R+  +++  E
Sbjct:  140 IIKLYGSIELAPLVGLSERIVDLVSTGETLRQNGLVEVETIAEITTRLIVNRASLKTKHPRITEIIEGLE 209          
BLAST of EY736337 vs. ExPASy Swiss-Prot
Match: HISX_NITMU (Histidinol dehydrogenase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=hisD PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.220e-15
Identity = 47/111 (42.34%), Postives = 61/111 (54.95%), Query Frame = 1
Query:  280 MALINRLDSRDPGFASALSKLLAFEATEDESIDRAAAGILADVRARGDAALVEYTQRFDRMPHASADTLEIPKXXXXXXXXXXXXXXXXXXXXXXERVRRYQERQRSETWT 612
            M  I RL S D  F  ALS+LLAFE T+D  ++ A A ILA +R  GD AL+EYT RFDR+   SA  LE+P+                      ERVR Y E+Q +++W+
Sbjct:    1 MISIKRLSSADTEFDKALSELLAFENTQDAKLEAAVADILAKIRTEGDKALLEYTLRFDRVDAKSAADLELPRNRLQQALHNLPGEQRNALEQAAERVRVYHEKQLTQSWS 111          
BLAST of EY736337 vs. ExPASy Swiss-Prot
Match: HIS1_PELCD (ATP phosphoribosyltransferase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=hisG PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.220e-15
Identity = 44/70 (62.86%), Postives = 56/70 (80.00%), Query Frame = 1
Query:    1 IIKLYGSMELAPLVGLADCIVDLVSTGGTLRANDLVAVEDIMPISSRLIVNQAALKTRGERLQPLLDAFE 210
            +IKLYGS+ELAPLVGLA+ IVDLVSTG T+R N LV VE I  I+SRLIVN+A+LKT+ +R+  ++   E
Sbjct:  140 LIKLYGSIELAPLVGLAERIVDLVSTGATMRDNGLVEVETIGEITSRLIVNRASLKTKHQRITRIIQDLE 209          
BLAST of EY736337 vs. ExPASy Swiss-Prot
Match: HIS1_AZOVD (ATP phosphoribosyltransferase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=hisG PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.220e-15
Identity = 45/67 (67.16%), Postives = 53/67 (79.10%), Query Frame = 1
Query:    1 IIKLYGSMELAPLVGLADCIVDLVSTGGTLRANDLVAVEDIMPISSRLIVNQAALKTRGERLQPLLD 201
            IIKLYGSMELAPLVGLAD I+D+V TG TLRAN L   E I  ISSRLIVN+A++K +  R+Q L+D
Sbjct:  133 IIKLYGSMELAPLVGLADKIIDVVDTGNTLRANGLEPQELIATISSRLIVNKASMKMQHARIQTLID 199          
BLAST of EY736337 vs. ExPASy Swiss-Prot
Match: HIS1_ALHEH (ATP phosphoribosyltransferase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=hisG PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.593e-15
Identity = 43/66 (65.15%), Postives = 52/66 (78.79%), Query Frame = 1
Query:    1 IIKLYGSMELAPLVGLADCIVDLVSTGGTLRANDLVAVEDIMPISSRLIVNQAALKTRGERLQPLL 198
            +IKLYGSMELAPLVGL D IVDLV TG TLRAN L  +E I  ISSRL+VN+A++K +  R++ LL
Sbjct:  138 LIKLYGSMELAPLVGLGDVIVDLVDTGNTLRANGLEPLEHITDISSRLVVNKASMKMKHRRIKALL 203          
BLAST of EY736337 vs. ExPASy Swiss-Prot
Match: HISX_THIDA (Histidinol dehydrogenase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=hisD PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.081e-15
Identity = 45/111 (40.54%), Postives = 61/111 (54.95%), Query Frame = 1
Query:  280 MALINRLDSRDPGFASALSKLLAFEATEDESIDRAAAGILADVRARGDAALVEYTQRFDRMPHASADTLEIPKXXXXXXXXXXXXXXXXXXXXXXERVRRYQERQRSETWT 612
            M  + RLDS  P F + L++LL F+   D SI+ A A IL  V+ RGDAA++EYT+RFDR+P  SA +LE+                        +RVRRY E+Q   +WT
Sbjct:    1 MLTLTRLDSAQPDFQARLARLLQFDDATDASIEEAVATILHAVKTRGDAAVLEYTERFDRLPAPSAASLELGAAELAAALAGLPEDTRAALEAAADRVRRYHEKQLQGSWT 111          
BLAST of EY736337 vs. ExPASy Swiss-Prot
Match: HIS1_PSEU2 (ATP phosphoribosyltransferase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=hisG PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.081e-15
Identity = 43/67 (64.18%), Postives = 53/67 (79.10%), Query Frame = 1
Query:    1 IIKLYGSMELAPLVGLADCIVDLVSTGGTLRANDLVAVEDIMPISSRLIVNQAALKTRGERLQPLLD 201
            IIKLYGSMELAPL+GLAD I+D+V TG TLRAN L   E I  ISSRL+VN+A++K +  R+Q L+D
Sbjct:  133 IIKLYGSMELAPLIGLADKIIDVVDTGNTLRANGLEPQELIATISSRLVVNKASMKMQHARIQALID 199          
BLAST of EY736337 vs. ExPASy Swiss-Prot
Match: HIS1_PSESM (ATP phosphoribosyltransferase OS=Pseudomonas syringae pv. tomato GN=hisG PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.081e-15
Identity = 43/67 (64.18%), Postives = 53/67 (79.10%), Query Frame = 1
Query:    1 IIKLYGSMELAPLVGLADCIVDLVSTGGTLRANDLVAVEDIMPISSRLIVNQAALKTRGERLQPLLD 201
            IIKLYGSMELAPL+GLAD I+D+V TG TLRAN L   E I  ISSRL+VN+A++K +  R+Q L+D
Sbjct:  133 IIKLYGSMELAPLIGLADKIIDVVDTGNTLRANGLEPQELIATISSRLVVNKASMKMQHARIQALID 199          
BLAST of EY736337 vs. ExPASy Swiss-Prot
Match: HIS1_PSEPF (ATP phosphoribosyltransferase OS=Pseudomonas fluorescens (strain Pf0-1) GN=hisG PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.081e-15
Identity = 43/67 (64.18%), Postives = 53/67 (79.10%), Query Frame = 1
Query:    1 IIKLYGSMELAPLVGLADCIVDLVSTGGTLRANDLVAVEDIMPISSRLIVNQAALKTRGERLQPLLD 201
            IIKLYGSMELAPL+GLAD I+D+V TG TLRAN L   E I  ISSRL+VN+A++K +  R+Q L+D
Sbjct:  133 IIKLYGSMELAPLIGLADKIIDVVDTGNTLRANGLEPQELIATISSRLVVNKASMKMQHARIQALID 199          
BLAST of EY736337 vs. ExPASy Swiss-Prot
Match: HIS1_PSEF5 (ATP phosphoribosyltransferase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=hisG PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.081e-15
Identity = 43/67 (64.18%), Postives = 53/67 (79.10%), Query Frame = 1
Query:    1 IIKLYGSMELAPLVGLADCIVDLVSTGGTLRANDLVAVEDIMPISSRLIVNQAALKTRGERLQPLLD 201
            IIKLYGSMELAPL+GLAD I+D+V TG TLRAN L   E I  ISSRL+VN+A++K +  R+Q L+D
Sbjct:  133 IIKLYGSMELAPLIGLADKIIDVVDTGNTLRANGLEPQELIATISSRLVVNKASMKMQHARIQALID 199          
The following BLAST results are available for this feature:
BLAST of EY736337 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 199
Match NameE-valueIdentityDescription
HIS12_GEOSL9.340e-1662.86ATP phosphoribosyltransferase 2 OS=Geobacter sulfu... [more]
HISX_NITMU1.220e-1542.34Histidinol dehydrogenase OS=Nitrosospira multiform... [more]
HIS1_PELCD1.220e-1562.86ATP phosphoribosyltransferase OS=Pelobacter carbin... [more]
HIS1_AZOVD1.220e-1567.16ATP phosphoribosyltransferase OS=Azotobacter vinel... [more]
HIS1_ALHEH1.593e-1565.15ATP phosphoribosyltransferase OS=Alkalilimnicola e... [more]
HISX_THIDA2.081e-1540.54Histidinol dehydrogenase OS=Thiobacillus denitrifi... [more]
HIS1_PSEU22.081e-1564.18ATP phosphoribosyltransferase OS=Pseudomonas syrin... [more]
HIS1_PSESM2.081e-1564.18ATP phosphoribosyltransferase OS=Pseudomonas syrin... [more]
HIS1_PSEPF2.081e-1564.18ATP phosphoribosyltransferase OS=Pseudomonas fluor... [more]
HIS1_PSEF52.081e-1564.18ATP phosphoribosyltransferase OS=Pseudomonas fluor... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-705-015-A05-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736337 ID=EY736337; Name=EY736337; organism=Citrus sinensis; type=EST; length=860bp
ATCATCAAGCTGTATGGTTCGATGGAACTGGCGCCGCTGGTGGGCCTGGC
CGACTGCATCGTGGACCTGGTGTCCACCGGCGGCACGCTGCGCGCCAACG
ACCTGGTCGCGGTCGAGGACATCATGCCGATCTCCTCGCGCCTGATCGTC
AACCAGGCCGCGCTGAAGACCCGCGGCGAACGCCTGCAACCGCTGCTGGA
CGCTTTCGAGCGCGCCGCCTCCCGCAACGCCTGACCCAGGCCGCCGCCCC
GCGCGGCGTCCGCCACCCGCCTGAACGCCATGGCCCTGATCAATCGTCTC
GACTCCCGCGATCCCGGATTCGCATCCGCCCTGTCCAAGCTGCTGGCCTT
CGAGGCCACCGAGGACGAGTCCATCGACCGCGCCGCCGCCGGCATCCTGG
CCGACGTGCGGGCCCGCGGCGACGCCGCGCTGGTGGAATACACCCAGCGC
TTCGACCGCATGCCGCATGCGTCAGCGGACACGCTCGAAATCCCCAAGGC
CGACTGGCATGCGGCCCTGGTCGCGCTGGCGGCCGCCCAGCGCGACGCGC
TGCATGCCGCCGACGAGCGCGTGCGCCGCTACCAGGAGCGGCAGCGCTCC
GAGACCTGGACCTAGCCCGAAGGCCAAGGCCCGCTGCGGGGTCGGGGGGT
GAAGCCGGGTGTGCGGGTGGGGCCTGGAGGGGGGGGGGGGCGGGGGAGCT
TGGGGGCGGCCCGGGCGGCGGGGGCGGGGCCCCCGGTAACGGGCCCCGTG
CGCGCCAGCACCGCGCCCGGCCCCCCCCGCCCGGCGCGCGGCGCGCGGCC
GCCCGCCCCGCGCGGCGCCGGATTGCCCCCACTGCGTCGCCGTGGGGGGG
CGGGGGGGGG
back to top