EY736315

Overview
NameEY736315
Unique NameEY736315
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length754
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736315 vs. ExPASy Swiss-Prot
Match: VATA_ARCFU (V-type ATP synthase alpha chain OS=Archaeoglobus fulgidus GN=atpA PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.354e-25
Identity = 61/136 (44.85%), Postives = 85/136 (62.50%), Query Frame = 2
Query:   47 IVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVKKGAGMD 451
            IV+VFW LD KLA R+HFP++NWL SYS Y   L+ ++ E    ++  +R  A EVLQ E +L EIVQLVG DAL E  ++ LE A+++RE YL Q A+ P D +C   K   M++ I    +   QA++ G  +D
Sbjct:  408 IVKVFWALDAKLAARRHFPAINWLQSYSLYVDTLKDWFAENVSEEWNELRRWAMEVLQEEANLQEIVQLVGSDALPESQRVLLEVARIIREVYLIQYAYHPVDTYCSVQKQYDMLKAIKQINDWFYQALEAGKTID 543          
BLAST of EY736315 vs. ExPASy Swiss-Prot
Match: VATA3_METHJ (V-type ATP synthase alpha chain 3 OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=atpA3 PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.354e-25
Identity = 57/132 (43.18%), Postives = 88/132 (66.67%), Query Frame = 2
Query:   47 IVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ-FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVKKG 439
            IV+VFW LD  LA ++HFP++NWL+SYS YS     ++E+   P+FI ++ +  E+LQRE++L EI++LVG + L E D++ L  A++LRE YL Q AF  +D F    K   M++ I  F++ A +A++ G
Sbjct:  410 IVKVFWALDADLAYQRHFPAINWLMSYSLYSPIAGIWWEEHIGPEFIRMKQEMMEILQRENELEEIIRLVGPETLPESDRLLLLKAEILRESYLMQYAFDEFDTFTGPKKQYRMLKAIFTFFSQAERALETG 541          
BLAST of EY736315 vs. ExPASy Swiss-Prot
Match: VATA_THEP3 (V-type ATP synthase alpha chain OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=atpA PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.075e-25
Identity = 58/132 (43.94%), Postives = 86/132 (65.15%), Query Frame = 2
Query:   47 IVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ-FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVKKG 439
            +V+VFW LD +LA  +HFP++NWL SYS YS  +E +  +    D+  +R++A  +LQ E  L EIV+LVG DAL+  D++ LE A+ +RED+L QNAF   D +    K   M++ I+ FY  A +A++KG
Sbjct:  408 VVKVFWALDSELAYARHFPAINWLTSYSLYSDVVEDYMNKNVSSDWGELRSEAMRLLQEEASLQEIVRLVGIDALSTRDRLVLEVARSIREDFLHQNAFHEVDTYSSMEKQYRMLKLIMIFYQEAQKALEKG 539          
BLAST of EY736315 vs. ExPASy Swiss-Prot
Match: VATA_AERPE (V-type ATP synthase alpha chain OS=Aeropyrum pernix GN=atpA PE=3 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 4.016e-25
Identity = 61/163 (37.42%), Postives = 96/163 (58.90%), Query Frame = 2
Query:   50 VQVFWGLDKKLAQRKHFPSVNWLISYSKY-STALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVKKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDP 535
            ++VFW LD KLA  +H+P++NWL+SYS Y     + ++E  D  +   R +A ++L RE +L EIV+LVG + L E DK+ LETA+L+++ +L QNAF P D F    K   +++ I+  +  + + ++KG       +T   I   LG L+  +V  KF  P
Sbjct:  418 IRVFWALDTKLAYSRHYPAINWLMSYSAYVDLVTQWWHENVDKRWREYRDEAMDILLRESELQEIVRLVGTEGLDEKDKMVLETARLIKDGFLKQNAFDPIDAFATPQKQFRLLKMIMDIHRKSLELIEKG-------VTTQQILQALGRLYIDIVKAKFTIP 573          
BLAST of EY736315 vs. ExPASy Swiss-Prot
Match: VATA_HALWD (V-type ATP synthase alpha chain OS=Haloquadratum walsbyi (strain DSM 16790) GN=atpA PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.245e-25
Identity = 63/136 (46.32%), Postives = 83/136 (61.03%), Query Frame = 2
Query:   47 IVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALES-FYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVKKGAGMD 451
            IV+ FW LD  LA+R+HFPS+NW  SYS Y   L+  F E  + D+   R  A +VL  E +L EIVQLVGKDAL +  ++TLE A+ LRE YL QNAF P D +C   K+   +  I  F + A +A+  G  +D
Sbjct:  411 IVKTFWALDADLAERRHFPSINWDESYSLYKEQLDPWFQENVEDDWPEERQWAVDVLDEESELQEIVQLVGKDALPDDQQLTLEVARYLRESYLQQNAFHPVDTYCSPEKTYLTVTAIHQFNDEAFEALDAGVPVD 546          
BLAST of EY736315 vs. ExPASy Swiss-Prot
Match: VATA_THEPX (V-type ATP synthase alpha chain OS=Thermoanaerobacter sp. (strain X514) GN=atpA PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.946e-25
Identity = 57/132 (43.18%), Postives = 85/132 (64.39%), Query Frame = 2
Query:   47 IVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ-FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVKKG 439
            +V+VFW LD +LA  +HFP++NWL SYS YS  +E +  +    D+  +R++A  +LQ E  L EIV+LVG D L+  D++ LE A+ +RED+L QNAF   D +    K   M++ I+ FY  A +A++KG
Sbjct:  408 VVKVFWALDSELAYARHFPAINWLTSYSLYSDVVEDYMNKNVSSDWGELRSEAMRLLQEEASLQEIVRLVGIDVLSTRDRLVLEVARSIREDFLHQNAFHEVDTYSSMEKQYRMLKLIMIFYQEAQKALEKG 539          
BLAST of EY736315 vs. ExPASy Swiss-Prot
Match: VATA_HALVO (V-type ATP synthase alpha chain OS=Halobacterium volcanii GN=atpA PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.946e-25
Identity = 62/136 (45.59%), Postives = 86/136 (63.24%), Query Frame = 2
Query:   47 IVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALES-FYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVKKGAGMD 451
            IV+ FW LD  LA+R+HFP++NW  SYS Y   L+  F E  + D+   R  A +VL  E++L EIVQLVGKDAL E  ++TLE A+ LRE YL QNAF P D +C   K+  ++  I  F + A +A++ G  ++
Sbjct:  412 IVKTFWALDADLAERRHFPAINWNESYSLYQEQLDPWFVENVEDDWAEERQWAVDVLDEENELQEIVQLVGKDALPEDQQLTLEIARYLREAYLQQNAFHPTDTYCSPEKTYGILTAIHAFNDEAFKALEAGVPVE 547          
BLAST of EY736315 vs. ExPASy Swiss-Prot
Match: VATA_DEIRA (V-type ATP synthase alpha chain OS=Deinococcus radiodurans GN=atpA PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.946e-25
Identity = 55/136 (40.44%), Postives = 85/136 (62.50%), Query Frame = 2
Query:   47 IVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVKKGAGMD 451
            I   FW LD  LA+R+HFP++NW  SYS ++  L+ +Y E   PDF  +R +   +LQ+E  L E+VQLVG DAL + +++ +ET ++LR+D+L QN F P D      K+  +M+  + FY+ A  A++ G  +D
Sbjct:  405 ITGAFWRLDAGLARRRHFPAINWNGSYSLFTPILDKWYRENVGPDFPELRQRIGSLLQQEAALQEVVQLVGPDALQDNERLIIETGRMLRQDFLQQNGFDPVDASASMPKNYGLMKMFLKFYDEAEAALRNGLTID 540          
BLAST of EY736315 vs. ExPASy Swiss-Prot
Match: VATA_NITMS (V-type ATP synthase alpha chain OS=Nitrosopumilus maritimus (strain SCM1) GN=atpA PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.168e-24
Identity = 57/151 (37.75%), Postives = 94/151 (62.25%), Query Frame = 2
Query:   50 VQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVKKG---AGMDGQKITYTLIKHRL 490
            ++ FW LD KLA  +H+PS+NW+ SYS Y   +  ++ E  + D++++R++   VLQRED L EIV+L+G +AL + +K+ LE A++++   L QN+F   D +C   K   +M+ ++ FY    QA+K+G   A +   K   TL+K R+
Sbjct:  411 IKTFWALDAKLAYSRHYPSINWMNSYSGYLADIAKWWGENINEDWLSLRSEVYGVLQREDTLKEIVRLLGPEALPDEEKLILEVARMVKIGLLQQNSFDDVDTYCSPEKQYKLMKLLVDFYKKGQQAIKEGTPLADIRAMKSITTLLKARM 561          
BLAST of EY736315 vs. ExPASy Swiss-Prot
Match: VATA_HALOH (V-type ATP synthase alpha chain OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=atpA PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.168e-24
Identity = 56/129 (43.41%), Postives = 81/129 (62.79%), Query Frame = 2
Query:   50 VQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVK 433
            V+ FW LDK LA  +HFP+VNWL SYS+Y   L  +  E  + D+I +R  A E+L+ ED L EIV+LVG+D L +  ++ LE A+L++  +L QNAF+  D+F    K  WM++ I+  Y  A   +K
Sbjct:  410 VRCFWALDKSLASARHFPAVNWLESYSEYLEDLSGWLKENINEDWIKLRNMAMELLKEEDRLQEIVKLVGEDVLPDNQRLILEVARLIKIGFLQQNAFSKVDRFATPEKQYWMLKIIMFLYEKARPLIK 538          
The following BLAST results are available for this feature:
BLAST of EY736315 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 150
Match NameE-valueIdentityDescription
VATA_ARCFU2.354e-2544.85V-type ATP synthase alpha chain OS=Archaeoglobus f... [more]
VATA3_METHJ2.354e-2543.18V-type ATP synthase alpha chain 3 OS=Methanospiril... [more]
VATA_THEP33.075e-2543.94V-type ATP synthase alpha chain OS=Thermoanaerobac... [more]
VATA_AERPE4.016e-2537.42V-type ATP synthase alpha chain OS=Aeropyrum perni... [more]
VATA_HALWD5.245e-2546.32V-type ATP synthase alpha chain OS=Haloquadratum w... [more]
VATA_THEPX8.946e-2543.18V-type ATP synthase alpha chain OS=Thermoanaerobac... [more]
VATA_HALVO8.946e-2545.59V-type ATP synthase alpha chain OS=Halobacterium v... [more]
VATA_DEIRA8.946e-2540.44V-type ATP synthase alpha chain OS=Deinococcus rad... [more]
VATA_NITMS1.168e-2437.75V-type ATP synthase alpha chain OS=Nitrosopumilus ... [more]
VATA_HALOH1.168e-2443.41V-type ATP synthase alpha chain OS=Halothermothrix... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-705-014-F10-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736315 ID=EY736315; Name=EY736315; organism=Citrus sinensis; type=EST; length=754bp
CCACGCGTCCGCCCACGCGTCCGCTGTAACATCTGCCACCCTCAGCATTG
TGCAGGTCTTCTGGGGTCTGGATAAGAAACTTGCGCAGAGAAAGCATTTT
CCTTCTGTAAACTGGCTTATTTCTTACTCGAAGTATTCAACAGCATTAGA
GTCTTTCTATGAGCAATTTGATCCGGATTTTATTAACATCAGGACAAAGG
CTAGAGAGGTGCTGCAGAGAGAAGATGACCTGAATGAAATTGTGCAACTT
GTCGGAAAGGATGCTTTGGCTGAAGGAGATAAGATTACGCTAGAGACTGC
TAAGCTTTTGAGGGAGGACTATCTTGCTCAGAACGCATTTACTCCATATG
ACAAGTTCTGCCCTTTCTACAAGTCTGTTTGGATGATGCGTAACATTATC
CATTTCTATAACTTGGCCAATCAGGCCGTAAAGAAAGGAGCTGGTATGGA
TGGTCAGAAGATAACTTACACCCTTATCAAGCATCGGCTGGGAGATCTAT
TTTACAGATTAGTATCACAGAAGTTTGAGGACCCAGCAGAAGGAGAACAN
CTCTGGTTGCTAAATTCAAAAAGCTGCACGAGGATCTGACCGCTGGTTTC
CGCGCCCTCGAGGATGAAACTCGATGATTGAAAGTGTCAAGTTAGATTCT
TTGTGATCCCATCGGCGGCTCGGGATCTTCCGGTGACCGCAGGGGGCTGG
TCACTGTCCCATCGGACTGGACGAAGCGGATGTGGGTGGGGGCGTGGTCG
GCCC
back to top