EY736294

Overview
NameEY736294
Unique NameEY736294
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length859
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736294 vs. ExPASy Swiss-Prot
Match: TPSD3_ABIGR (Pinene synthase, chloroplastic OS=Abies grandis GN=ag3 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.953e-17
Identity = 67/251 (26.69%), Postives = 117/251 (46.61%), Query Frame = 1
Query:   25 TTSVYPMSSCINPSTLATSVNGFKCLPLPTNRAAIRIMAKNKPVQCLVSAKYDNLTVD----RRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVMTTIKDVT-----------EPLDQLELIDNLQRLGLAYHFETEIRNIL---HXXXXXXXXXXWRKE---NLYATSLEFRLLRQHGYPVSQDVFNGFKDDKGGFICN-------DFKGIISLHEAXXXXXXXXXXXXXXXXFTR*HLKEVM 693
            +T+     SC++ S L +S +  K L       A+ +  + K +   +S     +  D    RR  ++  ++WD D +QSL + Y +++Y  RAE+L G+V      ++           + + +L ++D+L+RLG+  HF+ EI++ L   +           R+    +L +T+L  R LR HGYPVS DVF  FK   G F C+       + +G+++L  A                F+  +LKE +
Sbjct:    5 STAPLASKSCLHKS-LISSTHELKALSRTI--PALGMSRRGKSITPSISMSSTTVVTDDGVRRRMGDFHSNLWDDDVIQSLPTAYEEKSYLERAEKLIGEVKNMFNSMSLEDGELMSPLNDLIQRLWIVDSLERLGIHRHFKDEIKSALDYVYSYWGENGIGCGRESVVTDLNSTALGLRTLRLHGYPVSSDVFKAFKGQNGQFSCSENIQTDEEIRGVLNLFRASLIAFPGEKIMDEAEIFSTKYLKEAL 252          
BLAST of EY736294 vs. ExPASy Swiss-Prot
Match: DCS3_GOSAR ((+)-delta-cadinene synthase isozyme A OS=Gossypium arboreum GN=CAD1-A PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.468e-17
Identity = 55/147 (37.41%), Postives = 84/147 (57.14%), Query Frame = 1
Query:  196 DRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVMTTIKDVTEPLD----QLELIDNLQRLGLAYHFETEIRNILHXXXXXXXXXXWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDDKGGF---ICNDFKGIISLHEA 615
            +R  A++ P IW   F+   +++  D   + + EELK +V    K + EP+D    +L  ID +QRLG++YHFE EI + L               +LY T+L FRLLR+HG+ +S D FN FKD+ G F   + +D +G++ L+EA
Sbjct:   20 NRPKADFHPGIWGDMFIICPDTDI-DAATELQYEELKAQVR---KMIMEPVDDSNQKLPFIDAVQRLGVSYHFEKEIEDELENIYRDTNNND-ADTDLYTTALRFRLLREHGFDISCDAFNKFKDEAGNFKASLTSDVQGLLELYEA 161          
BLAST of EY736294 vs. ExPASy Swiss-Prot
Match: TPSD9_ABIGR (Terpinolene synthase, chloroplastic OS=Abies grandis GN=ag9 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.103e-16
Identity = 60/210 (28.57%), Postives = 103/210 (49.05%), Query Frame = 1
Query:  163 LVSAKYDNLTVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEEL--------------KGKVMTTIKDVTEPLDQLELIDNLQRLGLAYHFETEIRNILHXXXXXXXXXXWRKE-----------NLYATSLEFRLLRQHGYPVSQDVFNGFKD--DKGGFICN------DFKGIISLHEAXXXXXXXXXXXXXXXXFTR*HLKEVM 693
            L +A  D+  V RR   +  ++WD DF+QSL++ Y   +Y+ RA+ L               G+++T + D+   + +L ++DN++RLG+  HF+ EI+  L           W ++           +L +T+L FR+LR HGY VS DV   FK+  +KG F+C+      + K +++L  A                F++ +LKE +
Sbjct:   53 LSTAVSDDHGVQRRIVEFHSNLWDDDFIQSLSTPYGAPSYRERADRLIVEVKGIFTSISAEDGELITPLNDL---IQRLLMVDNVERLGIDRHFKNEIKAAL-----DYVYSYWNEKGIGSGSDSGVADLNSTALGFRILRLHGYSVSSDVLEHFKEEKEKGQFVCSAIQTEEEIKSVLNLFRASLIAFPGEKVMEEAEIFSKIYLKEAL 254          
BLAST of EY736294 vs. ExPASy Swiss-Prot
Match: TPSDA_ABIGR (Limonene synthase, chloroplastic OS=Abies grandis GN=ag10 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.882e-16
Identity = 62/200 (31.00%), Postives = 98/200 (49.00%), Query Frame = 1
Query:   67 TLATSVNGFKCLPLPTNRAAIRIMAKNKPVQC-----LVSAKYDNL--TVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVMTTIKDV----------TEPLDQLELIDNLQRLGLAYHFETEIRNILHXXXXXXXXXXWRKE------------NLYATSLEFRLLRQHGYPVSQDVFNGFKDDKGGFIC 579
            +L +S N  K L + T    +R+  + K +        VS + DN    + RR A++ P++W+ DF+QSL+S Y   +Y  RAE +  +V      +           + L +L ++D+++RLG+  HF+ EIR  L           W+++            +L +T+L  R LR HGY VS DV   FKD+KG F C
Sbjct:   19 SLISSSNVQKALCISTAVPTLRMRRRQKALVINMKLTTVSHRDDNGGGVLQRRIADHHPNLWEDDFIQSLSSPYGGSSYSERAETVVEEVKEMFNSIPNNRELFGSQNDLLTRLWMVDSIERLGIDRHFQNEIRVALDYVYSY-----WKEKEGIGCGRDSTFPDLNSTALALRTLRLHGYNVSSDVLEYFKDEKGHFAC 213          
BLAST of EY736294 vs. ExPASy Swiss-Prot
Match: CASS_RICCO (Casbene synthase, chloroplastic OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.210e-16
Identity = 61/163 (37.42%), Postives = 89/163 (54.60%), Query Frame = 1
Query:  148 KPVQ-CLVSAKYDNLTVDRRSANYQPSIWDHDFLQSLNSNYTD-ETYKRRAEELKGKVMTT-IKDVTEPLDQLELIDNLQRLGLAYHFETEIRNILHXXXXXXXXXXWRKE-NLYATSLEFRLLRQHGYPVSQDVFNGFKDDKGGF---ICNDFKGIISLHEA 615
            KP Q CL S  +  +   R  A + P++W + F  SL  N ++ E+Y  R   LK KV    I   ++ ++ + LID L RLG++YHFE +I  +L             KE +LY  ++ FR+ RQHG+ +S DVF+ FKD  G F   +  D KG++SL EA
Sbjct:   49 KPTQACLSSTTHQEV---RPLAYFPPTVWGNRFA-SLTFNPSEFESYDERVIVLKKKVKDILISSTSDSVETVILIDLLCRLGVSYHFENDIEELLSKIFNSQPDLVDEKECDLYTAAIVFRVFRQHGFKMSSDVFSKFKDSDGKFKESLRGDAKGMLSLFEA 207          
BLAST of EY736294 vs. ExPASy Swiss-Prot
Match: TPSDB_ABIGR (Limonene/alpha-pinene synthase, chloroplastic OS=Abies grandis GN=ag11 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.152e-16
Identity = 68/245 (27.76%), Postives = 111/245 (45.31%), Query Frame = 1
Query:   67 TLATSVNGFKCLPLPTNRAAIRIMAKNKPVQC-----LVSAKYDNL--TVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVMTTIKDV----------TEPLDQLELIDNLQRLGLAYHFETEIRNILHXXXXXXXXXXWRKE------------NLYATSLEFRLLRQHGYPVSQDVFNGFKDDKGGFICNDF-------KGIISLHEAXXXXXXXXXXXXXXXXFTR*HLKEVM 693
            +L +S N  K L + T    +R+  + K +        VS + DN    + RR A++ P++W+ DF+QSL+S Y   +Y  RA  +  +V      +           + L +L ++D+++RLG+  HF+ EIR  L           W+++            +L +T+L  R LR HGY VS DV   FKD KG F C          + +++L+ A                F+  +LKEV+
Sbjct:   19 SLISSSNVQKALCISTAVPTLRMRRRQKALVINMKLTTVSHRDDNGGGVLQRRIADHHPNLWEDDFIQSLSSPYGGSSYSERAVTVVEEVKEMFNSIPNNRELFGSQNDLLTRLWMVDSIERLGIDRHFQNEIRVALDYVYSY-----WKEKEGIGCGRDSTFPDLNSTALALRTLRLHGYNVSSDVLEYFKDQKGHFACPAILTEGQITRSVLNLYRASLVAFPGEKVMEEAEIFSASYLKEVL 258          
BLAST of EY736294 vs. ExPASy Swiss-Prot
Match: TPSD6_ABIGR (Camphene synthase, chloroplastic OS=Abies grandis GN=ag6 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.718e-15
Identity = 64/204 (31.37%), Postives = 96/204 (47.06%), Query Frame = 1
Query:  160 CLVSAKYDNLTVDRRSANYQPSIWDHDFLQSLNSN-YTDETYKRRAEELKGKV---MTTIKDVTEP----LDQLELIDNLQRLGLAYHFETEIRNILHXXXXXXXXXXWRKE-----------NLYATSLEFRLLRQHGYPVSQDVFNGFKDDKGGF-------ICNDFKGIISLHEAXXXXXXXXXXXXXXXXFTR*HLKEVM 693
            CL S    + +V RR  NY  ++WD DF+QSL S  Y    Y+ RA+ L G+V   M   K + +     L +L L+D+++RLG+  HF+ EI+  L           W ++           +L +T+L  R LR HGY VS DV N FKD  G F       I  + +G+++L  A                F+  +L+E +
Sbjct:   47 CLTSVASTD-SVQRRVGNYHSNLWDDDFIQSLISTPYGAPDYRERADRLIGEVKDIMFNFKSLEDGGNDLLQRLLLVDDVERLGIDRHFKKEIKTALDYVNSY-----WNEKGIGCGRESVVTDLNSTALGLRTLRLHGYTVSSDVLNVFKDKNGQFSSTANIQIEGEIRGVLNLFRASLVAFPGEKVMDEAETFSTKYLREAL 244          
BLAST of EY736294 vs. ExPASy Swiss-Prot
Match: TPSD8_ABIGR (Beta-phellandrene synthase, chloroplastic OS=Abies grandis GN=ag8 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.054e-15
Identity = 60/245 (24.49%), Postives = 116/245 (47.35%), Query Frame = 1
Query:   49 SCINPSTLATSVNGFKCL--PLPTNRAAIRIMAKNKPVQCLVSAKYDNLTVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVM-----------TTIKDVTEPLDQLELIDNLQRLGLAYHFETEIRNILHXXXXXXXXXXWRKE-----------NLYATSLEFRLLRQHGYPVSQDVFNGFKDDKGGFICN------DFKGIISLHEAXXXXXXXXXXXXXXXXFTR*HLKEVM 693
            SC++ S + ++ +  K L   +PT     R  +    V   ++    +  + RR  +Y  ++WD DF+QSL++ Y + +Y+ RAE+L G+V             ++  + + +++L ++D+++RLG+  HF+ EI++ L           W ++           ++ +T+  FR LR HGY VS +V   F+D  G F  +      D + +++L+ A                F+  +LKE +
Sbjct:   10 SCLHKSLIRSTHHELKPLRRTIPTLGMCRRGKSFTPSVSMSLTTAVSDDGLQRRIGDYHSNLWDDDFIQSLSTPYGEPSYRERAEKLIGEVKEMFNSMPSEDGESMSPLNDLIERLWMVDSVERLGIDRHFKKEIKSAL-----DYVYSYWNEKGIGCGRDSVFPDVNSTASGFRTLRLHGYSVSSEVLKVFQDQNGQFAFSPSTKERDIRTVLNLYRASFIAFPGEKVMEEAEIFSSRYLKEAV 249          
BLAST of EY736294 vs. ExPASy Swiss-Prot
Match: TPSD4_ABIGR (Delta-selinene synthase OS=Abies grandis GN=ag4 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.907e-15
Identity = 64/233 (27.47%), Postives = 102/233 (43.78%), Query Frame = 1
Query:  172 AKYDNLTVDRRSANYQPSIWDHDFLQSLNSNYTDETY----KRRAEELKGKVMTTIK---DVTEPLDQLELIDNLQRLGLAYHFETEIRNILHXXXXXXXXXXWRKE------------NLYATSLEFRLLRQHGYPVSQDVFNGFKDDKGGFICN----------DFKGIISLHEAXXXXXXXXXXXXXXXXFTR*HLKEVMISKSKQGDV--XVTEQTKRALELPLLWKVP 777
            A+    ++ RR+ N+  ++WD D + SLNS Y    Y    ++  +E+K  ++T ++      + + +L+++D L+ LG+  HFE EI+              W ++            +L AT+L FR LR H Y VS  V   FKD+ G F CN            + ++SL  A                FTR +L +V+       DV   +  + K ALE P    VP
Sbjct:    2 AEISESSIPRRTGNHHGNVWDDDLIHSLNSPYGAPAYYELLQKLIQEIKHLLLTEMEMDDGDHDLIKRLQIVDTLECLGIDRHFEHEIQTAA----LDYVYRWWNEKGIGEGSRDSFSKDLNATALGFRALRLHRYNVSSGVLKNFKDENGKFFCNFTGEEGRGDKQVRSMLSLLRASEISFPGEKVMEEAKAFTREYLNQVLAGHGDVTDVDQSLLREVKYALEFPWHCSVP 230          
BLAST of EY736294 vs. ExPASy Swiss-Prot
Match: HUMS_ARATH (Alpha-humulene/(-)-(E)-beta-caryophyllene synthase OS=Arabidopsis thaliana GN=TPS21 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.349e-14
Identity = 56/196 (28.57%), Postives = 92/196 (46.94%), Query Frame = 1
Query:  193 VDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVMTT-IKDVTEPLDQLELIDNLQRLGLAYHFETEIRNILHXXXXXXXXXXWRKE---NLYATSLEFRLLRQHGYPVSQDVFNGFKDDKG---GFICNDFKGIISLHEAXXXXXXXXXXXXXXXXFTR*HLKEVMISKSKQGDVXVTEQTKRALELP 759
            V+R  A++  +IW+        S+   ET+K +   LK  V    +     P++ ++ ID L RLG++YHFE +I   L             ++   +LY   + F++ RQ G+ +S DVF  FKD+ G   G +  D  G++SL+EA                F+R HL+E+    S +    +  + K AL+ P
Sbjct:    5 VNRPLADFPANIWEDPLTSFSKSDLGTETFKEKHSTLKEAVKEAFMSSKANPIENIKFIDALCRLGVSYHFEKDIVEQLDKSFDCLDFPQMVRQEGCDLYTVGIIFQVFRQFGFKLSADVFEKFKDENGKFKGHLVTDAYGMLSLYEAAQWGTHGEDIIDEALAFSRSHLEEI----SSRSSPHLAIRIKNALKHP 196          
The following BLAST results are available for this feature:
BLAST of EY736294 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
TPSD3_ABIGR4.953e-1726.69Pinene synthase, chloroplastic OS=Abies grandis GN... [more]
DCS3_GOSAR6.468e-1737.41(+)-delta-cadinene synthase isozyme A OS=Gossypium... [more]
TPSD9_ABIGR1.103e-1628.57Terpinolene synthase, chloroplastic OS=Abies grand... [more]
TPSDA_ABIGR1.882e-1631.00Limonene synthase, chloroplastic OS=Abies grandis ... [more]
CASS_RICCO3.210e-1637.42Casbene synthase, chloroplastic OS=Ricinus communi... [more]
TPSDB_ABIGR7.152e-1627.76Limonene/alpha-pinene synthase, chloroplastic OS=A... [more]
TPSD6_ABIGR2.718e-1531.37Camphene synthase, chloroplastic OS=Abies grandis ... [more]
TPSD8_ABIGR6.054e-1524.49Beta-phellandrene synthase, chloroplastic OS=Abies... [more]
TPSD4_ABIGR7.907e-1527.47Delta-selinene synthase OS=Abies grandis GN=ag4 PE... [more]
HUMS_ARATH1.349e-1428.57Alpha-humulene/(-)-(E)-beta-caryophyllene synthase... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-014-D08-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736294 ID=EY736294; Name=EY736294; organism=Citrus sinensis; type=EST; length=859bp
CACGCGTCCGGTAAGCTAGCTTACACTACATCTGTATATCCAATGTCTTC
TTGCATTAATCCCTCAACCTTGGCTACCTCTGTAAATGGTTTCAAATGTC
TTCCTCTTCCAACAAATAGAGCAGCCATCAGAATCATGGCAAAAAATAAG
CCAGTCCAATGCCTTGTCAGCGCCAAATATGATAATTTGACAGTTGATAG
GAGATCAGCAAACTACCAACCTTCAATTTGGGACCATGATTTTTTGCAGT
CACTGAATAGCAACTATACGGATGAAACATACAAAAGACGAGCAGAAGAG
CTGAAGGGAAAAGTAATGACAACAATTAAGGATGTAACCGAGCCTCTGGA
TCAGTTGGAGCTGATTGACAACTTGCAAAGACTTGGATTGGCTTATCATT
TTGAGACTGAGATTCGGAACATATTGCACAATAACTACAACAATAATAAA
GATTATAATTGGAGAAAAGAAAATCTGTATGCAACCTCCCTCGAGTTTAG
ACTACTTAGACAACATGGCTATCCTGTTTCTCAAGACGTTTTCAATGGTT
TTAAAGACGACAAGGGGGGCTTCATTTGTAATGATTTCAAGGGAATAATA
AGCTTGCATGAAGCCTCGTATTACAGCTTGGAAGGAGAAAGCTCATGGGA
GGAGGGCTGNNCATTCACCAGGTAACATCTAAAAGAAGTGATGATCAGCA
AGAGCAAGCAAGGGGATGTCTTNGTAACAGAACAAACCAAGCGTGCACTG
GAGCTTCCTCTGCTTTGGAAAGTTCCATGTTAGAGGCAAGGTGGGTCCTA
CACCGTTATGAGAAAAGAAGAGACAAGAACCACTTTTAATTGAGCTCGCT
AAGTTGGAA
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