EY736294

Overview
NameEY736294
Unique NameEY736294
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length859
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY736294 vs. ExPASy Swiss-Prot
Match: TPSD5_ABIGR (Gamma-humulene synthase OS=Abies grandis GN=ag5 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.812e-12
Identity = 58/215 (26.98%), Postives = 97/215 (45.12%), Query Frame = 1 
Query:  205 SANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKV-MTTIKDVTEP--------LDQLELIDNLQRLGLAYHFETEIRNIL-------HXXXXXXXXXXWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDDKGGFICND-------------FKGIISLHEAXXXXXXXXXXXXXXXXFTR*HLKEVMISK-SKQGDVXVTEQTKRALELP 759
            ++N   ++W+ D +QSLNS Y    Y+ R+E+L  ++ +  + D+ +         + +LE++D ++ LG+  HF+ EI+  L       +            K++L AT+L FR LR H Y VS  V   F+DD G F C                + ++SL  A                FT  +LK+V+  + +   D  +  + K ALE P
Sbjct:   22 TSNRHGNMWEDDRIQSLNSPYGAPAYQERSEKLIEEIKLLFLSDMDDSCNDSDRDLIKRLEIVDTVECLGIDRHFQPEIKLALDYVYRCWNERGIGEGSRDSLKKDLNATALGFRALRLHRYNVSSGVLENFRDDNGQFFCGSTVEEEGAEAYNKHVRCMLSLSRASNILFPGEKVMEEAKAFTTNYLKKVLAGREATHVDESLLGEVKYALEFP 236
The following BLAST results are available for this feature:
BLAST of EY736294 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
TPSD5_ABIGR2.812e-1226.98Gamma-humulene synthase OS=Abies grandis GN=ag5 PE... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-014-D08-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736294 ID=EY736294; Name=EY736294; organism=Citrus sinensis; type=EST; length=859bp
CACGCGTCCGGTAAGCTAGCTTACACTACATCTGTATATCCAATGTCTTC
TTGCATTAATCCCTCAACCTTGGCTACCTCTGTAAATGGTTTCAAATGTC
TTCCTCTTCCAACAAATAGAGCAGCCATCAGAATCATGGCAAAAAATAAG
CCAGTCCAATGCCTTGTCAGCGCCAAATATGATAATTTGACAGTTGATAG
GAGATCAGCAAACTACCAACCTTCAATTTGGGACCATGATTTTTTGCAGT
CACTGAATAGCAACTATACGGATGAAACATACAAAAGACGAGCAGAAGAG
CTGAAGGGAAAAGTAATGACAACAATTAAGGATGTAACCGAGCCTCTGGA
TCAGTTGGAGCTGATTGACAACTTGCAAAGACTTGGATTGGCTTATCATT
TTGAGACTGAGATTCGGAACATATTGCACAATAACTACAACAATAATAAA
GATTATAATTGGAGAAAAGAAAATCTGTATGCAACCTCCCTCGAGTTTAG
ACTACTTAGACAACATGGCTATCCTGTTTCTCAAGACGTTTTCAATGGTT
TTAAAGACGACAAGGGGGGCTTCATTTGTAATGATTTCAAGGGAATAATA
AGCTTGCATGAAGCCTCGTATTACAGCTTGGAAGGAGAAAGCTCATGGGA
GGAGGGCTGNNCATTCACCAGGTAACATCTAAAAGAAGTGATGATCAGCA
AGAGCAAGCAAGGGGATGTCTTNGTAACAGAACAAACCAAGCGTGCACTG
GAGCTTCCTCTGCTTTGGAAAGTTCCATGTTAGAGGCAAGGTGGGTCCTA
CACCGTTATGAGAAAAGAAGAGACAAGAACCACTTTTAATTGAGCTCGCT
AAGTTGGAA
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