EY736258
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY736258 vs. ExPASy Swiss-Prot
Match: RL6_IGNH4 (50S ribosomal protein L6P OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=rpl6p PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 4.459e-34 Identity = 73/179 (40.78%), Postives = 115/179 (64.25%), Query Frame = 2 Query: 26 MDIPDGVKIKINAKIVEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLINGVTKGYRYKMRFVYAHFPINASIGNANKSIEIRNFLGEKKVRKVDMLDGVTVVRSEKVKD-ELILDGNDIELVSRSAALINQKCHVKNNDMRKFLDGIYVSER 559 +D+P+GV++++ V+V GP+G+L RDF H + EE GK+++ ++ +F +RK A + T +H+ N+I GVTKG+RYKM+ V++HFPI+ + +EI NF+GEK R +L GVTV KV+ ++I++G DIE V+++AA I Q + D R F+DGIY+ R Sbjct: 11 VDVPEGVEVEVEGSKVKVRGPKGELERDFSHAK-GIRIRVVEEEGKKQVLVETFFANRKRKALVNTVAAHIKNMITGVTKGWRYKMKIVFSHFPISVKV--VGDRVEIHNFIGEKAPRVAKVLPGVTV----KVQGRDVIIEGTDIEKVAQTAANIEQATKITEFDRRVFMDGIYIYAR 182
BLAST of EY736258 vs. ExPASy Swiss-Prot
Match: RL9_HAECO (60S ribosomal protein L9 (Fragment) OS=Haemonchus contortus PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.775e-33 Identity = 66/125 (52.80%), Postives = 89/125 (71.20%), Query Frame = 2 Query: 17 SETMDIPDGVKIKINAKIVEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLINGVTKGYRYKMRFVYAHFPINASIGNANKSIEIRNFLGEKKVRKVDM 391 ++T+D PDGV + ++V V GPRG L RDF+HL+++ E GK +L++ WFG RK AAIRT SH+ N+I GVTKG+RYKMR VYAHFPIN ++ + +++EIRNFLGEK VR V + Sbjct: 7 NDTVDFPDGVTFTVKNRVVHVTGPRGTLKRDFRHLHMEM-----ERVGKNQLRVRKWFGVRKEIAAIRTVCSHIQNMIKGVTKGFRYKMRSVYAHFPINVTLQDGGRTVEIRNFLGEKIVRPVPL 126
BLAST of EY736258 vs. ExPASy Swiss-Prot
Match: RL6_STAMF (50S ribosomal protein L6P OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rpl6p PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 6.026e-31 Identity = 70/184 (38.04%), Postives = 113/184 (61.41%), Query Frame = 2 Query: 20 ETMDIPDGVKIKINAKIVEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLINGVTKGYRYKMRFVYAHFPINASIGNANKSIEIRNFLGEK--KVRKVDMLDGVTVVRSEKVKDELILDGNDIELVSRSAALINQKCHVKNNDMRKFLDGIYVSERGQ 565 E +DIP+ V ++IN V+V GP+G + RDF H+ +++ +E K + ++ +F R+ A + T SH+ N+I GV KGYRYK++ +Y+HFPI + + N+ + I+NFLGEK ++ K+ D V+ E ++I++G DIE V ++AA I VK+ D R F DGIY+ + G+ Sbjct: 9 EEIDIPENVTVEINGLKVKVNGPKGSIERDFSHVR---NIILRKENSK--IIVETFFADRRKKALVGTIASHIENMIKGVLKGYRYKLKIIYSHFPITVEVDDRNRIVRIKNFLGEKSDRIAKIIGEDVKVTVKGE----DIIVEGIDIEHVGQTAANIELATKVKDKDRRVFADGIYIYDWGE 183
BLAST of EY736258 vs. ExPASy Swiss-Prot
Match: RL6_DESK1 (50S ribosomal protein L6P OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=rpl6p PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.991e-30 Identity = 68/185 (36.76%), Postives = 111/185 (60.00%), Query Frame = 2 Query: 17 SETMDIPDGVKIKINAKIVEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLINGVTKGYRYKMRFVYAHFPINASIGNANKSIEIRNFLGEKKVRKVDMLDGVTVVRSEKVKDELILDGNDIELVSRSAALINQKCHVKNNDMRKFLDGIYVSERGQYL 571 +E ++IP+ V ++++ V V+GP+G ++RDF H F + D R + ++ + RK A + T +H+ N+I GV +GYRYK++ +++HFPI S+ NK + IRNF+GEK R + V V S +++I++G DIE V +AA I + V + D R F+DGIY+ E+G+ L Sbjct: 8 AEKVEIPENVAVEVDGLRVTVKGPKGIITRDFSHARGVFIRLED-----RVVIVETFVADRKQKALVGTIAAHIRNMITGVVRGYRYKLKIIFSHFPITVSVDEKNKVVRIRNFMGEKSDRIAKIYGNVKVKVS---GEDIIIEGVDIEEVGLTAASIERATRVTDRDRRVFMDGIYIYEKGEAL 184
BLAST of EY736258 vs. ExPASy Swiss-Prot
Match: RL6_AERPE (50S ribosomal protein L6P OS=Aeropyrum pernix GN=rpl6p PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.536e-26 Identity = 67/181 (37.02%), Postives = 109/181 (60.22%), Query Frame = 2 Query: 20 ETMDIPDGVKIKINAKIVEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLINGVTKGYRYKMRFVYAHFPINASIGNANKSIEIRNFLGEKKVRKVDMLDGVTVVRSEKVK-DELILDGNDIELVSRSAALINQKCHVKNNDMRKFLDGIYVSER 559 E +++P+GV + I+ V+V GP+G++ RDF H + D + ++++F + A + H+ N+I GV G+RYK++ +Y+HFPIN + +K I I NFLGEK +R ++ GV V +VK ++I++G D+E V+++AA I VK+ D RKF+DGIY+ ER Sbjct: 9 ERVEVPEGVTVSIDGMRVKVSGPKGEVERDFSHARGVLIRLEDNS-----VVVESFFAKARQRALVGAIAGHIRNMIKGVQGGFRYKLKIMYSHFPINVKV-EGDKFI-ISNFLGEKGLRIARIMPGVKV----QVKGSDVIVEGIDVEKVAQTAANIELATKVKDKDRRKFMDGIYIYER 178
BLAST of EY736258 vs. ExPASy Swiss-Prot
Match: RL6_THEON (50S ribosomal protein L6P OS=Thermococcus onnurineus (strain NA1) GN=rpl6p PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.006e-26 Identity = 67/180 (37.22%), Postives = 104/180 (57.78%), Query Frame = 2 Query: 20 ETMDIPDGVKIKINAKIVEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLINGVTKGYRYKMRFVYAHFPINASIGNANKSIEIRNFLGEKKVRKVDMLDGVTVVRSEKVKDELILDGNDIELVSRSAALINQKCHVKNNDMRKFLDGIYVSER 559 E ++IP+GV++ I +V+V GP+G+L R+ K+ + T K+ I F +K A RT +H+ N+I GVT+G+ YK++ VY+HFP+ + + I NFLGEK R+ +L GVTV + + E+I++G D E V ++AA I Q + D R F DGIY+ E+ Sbjct: 9 EEVEIPEGVEVTIERNVVKVRGPKGELERELKYPGVQIF------TEDGKVVIYKEFPRKKDIAIARTFKAHIANMIKGVTEGFTYKLKVVYSHFPMTVKV--QGDEVVIENFLGEKNPRRAKILPGVTV---KVMGSEVIVEGIDKEAVGQTAANIEQATRITKWDRRVFQDGIYIVEK 177
BLAST of EY736258 vs. ExPASy Swiss-Prot
Match: RL6_SULTO (50S ribosomal protein L6P OS=Sulfolobus tokodaii GN=rpl6p PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.006e-26 Identity = 57/181 (31.49%), Postives = 107/181 (59.12%), Query Frame = 2 Query: 20 ETMDIPDGVKIKINAKIVEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLINGVTKGYRYKMRFVYAHFPINASIGNANKSIEIRNFLGEKKVRKVDMLDGVTVVRSEKVK-DELILDGNDIELVSRSAALINQKCHVKNNDMRKFLDGIYVSER 559 E ++IP G+ + I ++V+GP+G++ +DF H++ + ++ K+ ++ F R+ A + ++H+ N+ GVTKGYRY ++ +Y HFP+ + + ++I+N +GEK +R+ ++ GV V VK +++I++G DIE V ++AA I + D R F DGIY+ ++ Sbjct: 8 EEIEIPQGINVNIEGMKIKVKGPKGEIEKDFSHIS-GIEIRKEDN----KIVVETTFADRRKKAQFYSIIAHIENMFTGVTKGYRYYLKIIYTHFPVTVKV--SGNEVQIQNLIGEKNIRRAKIMTGVKV----NVKGEDIIVEGQDIEKVGQTAANIELASKITGYDRRVFADGIYIYKK 177
BLAST of EY736258 vs. ExPASy Swiss-Prot
Match: RL6_PYRKO (50S ribosomal protein L6P OS=Pyrococcus kodakaraensis GN=rpl6p PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.422e-26 Identity = 67/181 (37.02%), Postives = 106/181 (58.56%), Query Frame = 2 Query: 20 ETMDIPDGVKIKINAKIVEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLINGVTKGYRYKMRFVYAHFPINASIGNANKSIEIRNFLGEKKVRKVDMLDGVTVVRSEKVK-DELILDGNDIELVSRSAALINQKCHVKNNDMRKFLDGIYVSER 559 E ++IP+GV++ + V+V+GP+G+L R+ K+ + T K+ I F +K A +RT +H+ N+I GVT+G++Y+++ VY+HFP+ + + I NFLGEK R+ +L GVTV KVK E+ ++G D E V ++AA I Q + D R F DGIY+ E+ Sbjct: 9 EEIEIPEGVEVTVEGNTVKVKGPKGELQRELKYPGVQIF------TEDGKVVIYKEFPRKKDVAIVRTFKAHINNMIKGVTEGFKYRLKVVYSHFPMTVKV--QGDEVVIENFLGEKNPRRAKILPGVTV----KVKGSEIEVEGIDKEAVGQTAANIEQATRITKWDRRVFQDGIYIVEK 177
BLAST of EY736258 vs. ExPASy Swiss-Prot
Match: RL6_PYRAB (50S ribosomal protein L6P OS=Pyrococcus abyssi GN=rpl6p PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 7.623e-26 Identity = 70/181 (38.67%), Postives = 106/181 (58.56%), Query Frame = 2 Query: 20 ETMDIPDGVKIKINAKIVEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLINGVTKGYRYKMRFVYAHFPINASIGNANKSIEIRNFLGEKKVRKVDMLDGVTVVRSEKVK-DELILDGNDIELVSRSAALINQKCHVKNNDMRKFLDGIYVSER 559 E ++IP+GV++ + V+V+GP+G++ R+ + + E GK + D F RK A +RT +H+ N+I GVT+G+ YK++ VY+HFPI + + I NFLGEK R+ +L GVTV KVK E+I++G D E V ++AA I Q + D R F DGIY+ E+ Sbjct: 9 EEIEIPEGVEVSVQGNTVKVKGPKGEVERELFWPGVKIFV----EGGKVVIYKD--FPRRKDVAIVRTFKAHINNMIKGVTEGFTYKLKVVYSHFPITVKV--QGDEVIIENFLGEKAPRRAKILPGVTV----KVKGQEIIVEGIDKEAVGQTAANIEQATRITKWDRRVFQDGIYIVEK 177
BLAST of EY736258 vs. ExPASy Swiss-Prot
Match: RL6_THEGJ (50S ribosomal protein L6P OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rpl6p PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.300e-25 Identity = 66/181 (36.46%), Postives = 105/181 (58.01%), Query Frame = 2 Query: 20 ETMDIPDGVKIKINAKIVEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLINGVTKGYRYKMRFVYAHFPINASIGNANKSIEIRNFLGEKKVRKVDMLDGVTVVRSEKVK-DELILDGNDIELVSRSAALINQKCHVKNNDMRKFLDGIYVSER 559 E ++IP+GV++ + +V+V+GP+G+L R+ K+ + T K+ + F +K A RT +H+ N+I GVT+G+ YK++ VY+HFP+ + + I NFLGEK R+ +L GVTV KV+ E+ ++G D E V ++AA I Q + D R F DGIY+ E+ Sbjct: 9 EEVEIPEGVEVTVENNVVKVKGPKGELERELKYPGVKIF------TEDGKVVVYKEFPRKKDIAIARTFKAHINNMIKGVTEGFTYKLKVVYSHFPVTVKV--QGDEVIIENFLGEKNPRRAKILPGVTV----KVRGQEITVEGIDKEKVGQTAANIEQATRITKWDRRVFQDGIYIVEK 177 The following BLAST results are available for this feature:
BLAST of EY736258 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >EY736258 ID=EY736258; Name=EY736258; organism=Citrus sinensis; type=EST; length=859bpback to top |