EY736244

Overview
NameEY736244
Unique NameEY736244
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length510
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736244 vs. ExPASy Swiss-Prot
Match: CH605_SINMW (60 kDa chaperonin 5 OS=Sinorhizobium medicae (strain WSM419) GN=groL5 PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 4.715e-34
Identity = 69/104 (66.35%), Postives = 89/104 (85.58%), Query Frame = 2
Query:  197 AAKDIRFGVEARALMLKGVEELADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGTTCATVLTRAIFTEGCK 508
            AAK+++FG  AR  ML+GV+ LADAVKVT+GPKGRNVVI++S+GAP++TKDGVTVAK IE +DK +N+GA +V++VA+ TND+AGDGTT ATVL +AI  EG K
Sbjct:    2 AAKEVKFGRSAREKMLRGVDILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVTVAKEIELEDKFENMGAQMVREVASKTNDIAGDGTTTATVLAQAIVREGAK 105          
BLAST of EY736244 vs. ExPASy Swiss-Prot
Match: CH604_RHIME (60 kDa chaperonin 4 OS=Rhizobium meliloti GN=groL4 PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 4.715e-34
Identity = 69/104 (66.35%), Postives = 89/104 (85.58%), Query Frame = 2
Query:  197 AAKDIRFGVEARALMLKGVEELADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGTTCATVLTRAIFTEGCK 508
            AAK+++FG  AR  ML+GV+ LADAVKVT+GPKGRNVVI++S+GAP++TKDGVTVAK IE +DK +N+GA +V++VA+ TND+AGDGTT ATVL +AI  EG K
Sbjct:    2 AAKEVKFGRSAREKMLRGVDILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVTVAKEIELEDKFENMGAQMVREVASKTNDIAGDGTTTATVLAQAIVREGAK 105          
BLAST of EY736244 vs. ExPASy Swiss-Prot
Match: CH602_ERYLH (60 kDa chaperonin 2 OS=Erythrobacter litoralis (strain HTCC2594) GN=groL2 PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 6.157e-34
Identity = 70/104 (67.31%), Postives = 90/104 (86.54%), Query Frame = 2
Query:  197 AAKDIRFGVEARALMLKGVEELADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGTTCATVLTRAIFTEGCK 508
            AAKD++FG +AR  +LKGV+ LA+AVKVT+GPKGRNVVIE+S+GAP++TKDGVTVAK IE KDK +N+GA ++++VA+ TND+AGDGTT ATVL +AI  EG K
Sbjct:    2 AAKDVKFGRDAREGILKGVDTLANAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKEIELKDKYENMGAQMLREVASKTNDLAGDGTTTATVLGQAIVREGMK 105          
BLAST of EY736244 vs. ExPASy Swiss-Prot
Match: CH601_GLUDA (60 kDa chaperonin 1 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=groL1 PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 6.157e-34
Identity = 69/104 (66.35%), Postives = 89/104 (85.58%), Query Frame = 2
Query:  197 AAKDIRFGVEARALMLKGVEELADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGTTCATVLTRAIFTEGCK 508
            AAKD++FG +AR  ML+GV+ LADAVKVT+GPKGRNVV+++S+GAP++TKDGV+VAK IE  DK +N+GA +V++VA+ TNDVAGDGTT ATVL +AI  EG K
Sbjct:    2 AAKDVKFGGDARQRMLRGVDILADAVKVTLGPKGRNVVLDKSFGAPRITKDGVSVAKEIELADKFENMGAQMVREVASKTNDVAGDGTTTATVLAQAIVREGAK 105          
BLAST of EY736244 vs. ExPASy Swiss-Prot
Match: CH603_NITWN (60 kDa chaperonin 3 OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=groL3 PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 8.042e-34
Identity = 69/104 (66.35%), Postives = 89/104 (85.58%), Query Frame = 2
Query:  197 AAKDIRFGVEARALMLKGVEELADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGTTCATVLTRAIFTEGCK 508
            AAKD++F  +AR  ML+GV+ LADAVKVT+GPKGRNVVIE+S+GAP++TKDGVTVAK IE +D+ +N+GA +V++VA+ TND+AGDGTT ATVL +AI  EG K
Sbjct:    2 AAKDVKFSGDARQRMLRGVDILADAVKVTLGPKGRNVVIERSFGAPRITKDGVTVAKEIELEDRFENMGAQMVREVASKTNDLAGDGTTTATVLAQAIVREGAK 105          
BLAST of EY736244 vs. ExPASy Swiss-Prot
Match: CH60_SILPO (60 kDa chaperonin OS=Silicibacter pomeroyi GN=groL PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.050e-33
Identity = 70/104 (67.31%), Postives = 87/104 (83.65%), Query Frame = 2
Query:  197 AAKDIRFGVEARALMLKGVEELADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGTTCATVLTRAIFTEGCK 508
            AAKD++F  EAR  MLKGV  LADAVKVT+GPKGRNVV+++S+GAP++TKDGV+VAK IE +DK +N+GA +VK+VA+ TND AGDGTT ATVL +AI  EG K
Sbjct:    2 AAKDVKFNTEARNKMLKGVNILADAVKVTLGPKGRNVVLDKSFGAPRITKDGVSVAKEIELEDKFENMGAQMVKEVASRTNDEAGDGTTTATVLAQAIVREGMK 105          
BLAST of EY736244 vs. ExPASy Swiss-Prot
Match: CH60_PARL1 (60 kDa chaperonin OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=groL PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.050e-33
Identity = 70/103 (67.96%), Postives = 87/103 (84.47%), Query Frame = 2
Query:  200 AKDIRFGVEARALMLKGVEELADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGTTCATVLTRAIFTEGCK 508
            AK+++FG  AR  ML+GV+ LADAVKVT+GPKGRNVVIE+S+G+P+ TKDGVTVAK IE +DK +N+GA +VK+VA+ TND AGDGTT ATVLT+AI  EG K
Sbjct:    2 AKEVKFGRTAREKMLRGVDILADAVKVTLGPKGRNVVIEKSFGSPRTTKDGVTVAKEIELEDKFENMGAQMVKEVASKTNDTAGDGTTTATVLTQAIVREGAK 104          
BLAST of EY736244 vs. ExPASy Swiss-Prot
Match: CH60_JANSC (60 kDa chaperonin OS=Jannaschia sp. (strain CCS1) GN=groL PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.050e-33
Identity = 70/103 (67.96%), Postives = 86/103 (83.50%), Query Frame = 2
Query:  200 AKDIRFGVEARALMLKGVEELADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGTTCATVLTRAIFTEGCK 508
            AKD+RF  +AR  MLKGV  LADAVKVT+GPKGRNVVI++S+GAP++TKDGV+VAK IE +DK +N+GA +VK+VA+ TND AGDGTT ATVL +AI  EG K
Sbjct:    2 AKDVRFDTDARNRMLKGVNTLADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELEDKFENMGAQMVKEVASRTNDEAGDGTTTATVLAQAIIKEGLK 104          
BLAST of EY736244 vs. ExPASy Swiss-Prot
Match: CH60_GLUOX (60 kDa chaperonin OS=Gluconobacter oxydans GN=groL PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.050e-33
Identity = 67/104 (64.42%), Postives = 89/104 (85.58%), Query Frame = 2
Query:  197 AAKDIRFGVEARALMLKGVEELADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGTTCATVLTRAIFTEGCK 508
            AAKD++FG +AR  ML+GV+ LA+AVKVT+GPKGRNVV+++S+GAP++TKDGV+VAK IE  DK +N+GA +V++VA+ TND+AGDGTT ATVL +AI  EG K
Sbjct:    2 AAKDVKFGADARERMLRGVDILANAVKVTLGPKGRNVVLDKSFGAPRITKDGVSVAKEIELADKFENMGAQMVREVASKTNDIAGDGTTTATVLAQAIIREGAK 105          
BLAST of EY736244 vs. ExPASy Swiss-Prot
Match: CH60_DESPS (60 kDa chaperonin OS=Desulfotalea psychrophila GN=groL PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.050e-33
Identity = 70/104 (67.31%), Postives = 89/104 (85.58%), Query Frame = 2
Query:  197 AAKDIRFGVEARALMLKGVEELADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGTTCATVLTRAIFTEGCK 508
            A KDI++GV+AR  +L GV  LA+AVKVT+GPKGRNV+IE+S+GAP +TKDGV+VAK IE KDK +N+GA +VK+VA+ T+DVAGDGTT ATVL +AI+TEG K
Sbjct:    2 AGKDIKYGVKARESVLIGVNTLANAVKVTLGPKGRNVLIEKSFGAPTITKDGVSVAKEIELKDKFENMGAQMVKEVASKTSDVAGDGTTTATVLAQAIYTEGVK 105          
The following BLAST results are available for this feature:
BLAST of EY736244 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH605_SINMW4.715e-3466.3560 kDa chaperonin 5 OS=Sinorhizobium medicae (stra... [more]
CH604_RHIME4.715e-3466.3560 kDa chaperonin 4 OS=Rhizobium meliloti GN=groL4... [more]
CH602_ERYLH6.157e-3467.3160 kDa chaperonin 2 OS=Erythrobacter litoralis (st... [more]
CH601_GLUDA6.157e-3466.3560 kDa chaperonin 1 OS=Gluconacetobacter diazotrop... [more]
CH603_NITWN8.042e-3466.3560 kDa chaperonin 3 OS=Nitrobacter winogradskyi (s... [more]
CH60_SILPO1.050e-3367.3160 kDa chaperonin OS=Silicibacter pomeroyi GN=groL... [more]
CH60_PARL11.050e-3367.9660 kDa chaperonin OS=Parvibaculum lavamentivorans ... [more]
CH60_JANSC1.050e-3367.9660 kDa chaperonin OS=Jannaschia sp. (strain CCS1) ... [more]
CH60_GLUOX1.050e-3364.4260 kDa chaperonin OS=Gluconobacter oxydans GN=groL... [more]
CH60_DESPS1.050e-3367.3160 kDa chaperonin OS=Desulfotalea psychrophila GN=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-013-F12-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736244 ID=EY736244; Name=EY736244; organism=Citrus sinensis; type=EST; length=510bp
CACGCGTCCGCGGACGCGTGGGGTCGCCTCTCCTTCTATCTCTGCCACTA
GACTGTTACTCTCGGCTTCCTCTTCTCTGCAATTTTACGAAACTGCCACT
ATGTATCGTTTCGCTTCAAGCCTCGCTTCCAAAGCAAGGATCGCTAGGAA
CAGTACCCAGCAGATTGGAAATAGATTGAGTTGGTCCAGAAACTATGCTG
CCAAAGACATTAGATTTGGGGTTGAAGCTCGAGCTTTGATGCTGAAGGGT
GTTGAAGAGCTCGCCGATGCGGTCAAAGTCACCATGGGACCTAAGGGGCG
TAATGTGGTCATTGAACAAAGCTGGGGTGCTCCCAAGGTGACAAAAGATG
GTGTTACTGTTGCAAAGAGCATTGAATTCAAAGATAAAGTCAAGAACATT
GGTGCTAGCCTTGTGAAGCAAGTTGCTAATGCCACCAATGATGTTGCTGG
TGATGGAACTACCTGTGCAACAGTTCTTACCCGAGCAATATTTACAGAAG
GCTGCAAGTC
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