EY736244

Overview
NameEY736244
Unique NameEY736244
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length510
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736244 vs. ExPASy Swiss-Prot
Match: CH60_RICRO (60 kDa chaperonin OS=Rickettsia rickettsii (strain Iowa) GN=groL PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 2.860e-31
Identity = 68/104 (65.38%), Postives = 83/104 (79.81%), Query Frame = 2
Query:  197 AAKDIRFGVEARALMLKGVEELADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGTTCATVLTRAIFTEGCK 508
            A K I+ G +AR  ML+G++ LADAVKVT+GPKGRNV+IEQS+G+PK+TKDGVTVAKSIE KDK++N GA L+K  A    +VAGDGTT ATVL RA+  EG K
Sbjct:    2 ATKLIKHGSKAREQMLEGIDILADAVKVTLGPKGRNVLIEQSFGSPKITKDGVTVAKSIELKDKIRNAGAQLLKSAATKAAEVAGDGTTTATVLARALAREGNK 105          
BLAST of EY736244 vs. ExPASy Swiss-Prot
Match: CH60_RICRI (60 kDa chaperonin (Fragment) OS=Rickettsia rickettsii GN=groL PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 2.860e-31
Identity = 68/104 (65.38%), Postives = 83/104 (79.81%), Query Frame = 2
Query:  197 AAKDIRFGVEARALMLKGVEELADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGTTCATVLTRAIFTEGCK 508
            A K I+ G +AR  ML+G++ LADAVKVT+GPKGRNV+IEQS+G+PK+TKDGVTVAKSIE KDK++N GA L+K  A    +VAGDGTT ATVL RA+  EG K
Sbjct:    2 ATKLIKHGSKAREQMLEGIDILADAVKVTLGPKGRNVLIEQSFGSPKITKDGVTVAKSIELKDKIRNAGAQLLKSAATKAAEVAGDGTTTATVLARALAREGNK 105          
BLAST of EY736244 vs. ExPASy Swiss-Prot
Match: CH60_RICPU (60 kDa chaperonin OS=Rickettsia peacockii (strain Rustic) GN=groL PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 2.860e-31
Identity = 68/104 (65.38%), Postives = 83/104 (79.81%), Query Frame = 2
Query:  197 AAKDIRFGVEARALMLKGVEELADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGTTCATVLTRAIFTEGCK 508
            A K I+ G +AR  ML+G++ LADAVKVT+GPKGRNV+IEQS+G+PK+TKDGVTVAKSIE KDK++N GA L+K  A    +VAGDGTT ATVL RA+  EG K
Sbjct:    2 ATKLIKHGSKAREQMLEGIDILADAVKVTLGPKGRNVLIEQSFGSPKITKDGVTVAKSIELKDKIRNAGAQLLKSAATKAAEVAGDGTTTATVLARALAREGNK 105          
BLAST of EY736244 vs. ExPASy Swiss-Prot
Match: CH60_RICCN (60 kDa chaperonin OS=Rickettsia conorii GN=groL PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 2.860e-31
Identity = 68/104 (65.38%), Postives = 83/104 (79.81%), Query Frame = 2
Query:  197 AAKDIRFGVEARALMLKGVEELADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGTTCATVLTRAIFTEGCK 508
            A K I+ G +AR  ML+G++ LADAVKVT+GPKGRNV+IEQS+G+PK+TKDGVTVAKSIE KDK++N GA L+K  A    +VAGDGTT ATVL RA+  EG K
Sbjct:    2 ATKLIKHGSKAREQMLEGIDILADAVKVTLGPKGRNVLIEQSFGSPKITKDGVTVAKSIELKDKIRNAGAQLLKSAATKAAEVAGDGTTTATVLARALAREGNK 105          
BLAST of EY736244 vs. ExPASy Swiss-Prot
Match: CH60_RICAE (60 kDa chaperonin OS=Rickettsia africae (strain ESF-5) GN=groL PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 2.860e-31
Identity = 68/104 (65.38%), Postives = 83/104 (79.81%), Query Frame = 2
Query:  197 AAKDIRFGVEARALMLKGVEELADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGTTCATVLTRAIFTEGCK 508
            A K I+ G +AR  ML+G++ LADAVKVT+GPKGRNV+IEQS+G+PK+TKDGVTVAKSIE KDK++N GA L+K  A    +VAGDGTT ATVL RA+  EG K
Sbjct:    2 ATKLIKHGSKAREQMLEGIDILADAVKVTLGPKGRNVLIEQSFGSPKITKDGVTVAKSIELKDKIRNAGAQLLKSAATKAAEVAGDGTTTATVLARALAREGNK 105          
BLAST of EY736244 vs. ExPASy Swiss-Prot
Match: CH60_PSEA6 (60 kDa chaperonin OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=groL PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 2.860e-31
Identity = 66/104 (63.46%), Postives = 85/104 (81.73%), Query Frame = 2
Query:  197 AAKDIRFGVEARALMLKGVEELADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGTTCATVLTRAIFTEGCK 508
            AAK++RF  +AR  ML GV  LA+AVKVT+GPKGRNVV+++S+GAP +TKDGV+VAK IE +DK +N+GA +VK+VA+  ND AGDGTT ATVL ++I TEG K
Sbjct:    2 AAKEVRFSDDARVKMLAGVNILANAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAKEIELEDKFENMGAQMVKEVASKANDEAGDGTTTATVLAQSIVTEGLK 105          
BLAST of EY736244 vs. ExPASy Swiss-Prot
Match: CH60_LACDB (60 kDa chaperonin OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC BAA-365) GN=groL PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 2.860e-31
Identity = 65/103 (63.11%), Postives = 82/103 (79.61%), Query Frame = 2
Query:  200 AKDIRFGVEARALMLKGVEELADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGTTCATVLTRAIFTEGCK 508
            AKDI+F  +AR  +L GV +LA+ VK T+GPKGRNVV+EQS+GAP +T DGVT+AK+IE +D  +NIGA LV + A+ TND+AGDGTT ATVLT+AI  EG K
Sbjct:    2 AKDIKFSEDARRSLLNGVNKLANTVKTTLGPKGRNVVLEQSYGAPTITNDGVTIAKAIELEDHYENIGAKLVAEAASKTNDIAGDGTTTATVLTQAIVQEGMK 104          
BLAST of EY736244 vs. ExPASy Swiss-Prot
Match: CH60_LACDA (60 kDa chaperonin OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081) GN=groL PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 2.860e-31
Identity = 65/103 (63.11%), Postives = 82/103 (79.61%), Query Frame = 2
Query:  200 AKDIRFGVEARALMLKGVEELADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGTTCATVLTRAIFTEGCK 508
            AKDI+F  +AR  +L GV +LA+ VK T+GPKGRNVV+EQS+GAP +T DGVT+AK+IE +D  +NIGA LV + A+ TND+AGDGTT ATVLT+AI  EG K
Sbjct:    2 AKDIKFSEDARRSLLNGVNKLANTVKTTLGPKGRNVVLEQSYGAPTITNDGVTIAKAIELEDHYENIGAKLVAEAASKTNDIAGDGTTTATVLTQAIVQEGMK 104          
BLAST of EY736244 vs. ExPASy Swiss-Prot
Match: CH60_GEOTN (60 kDa chaperonin OS=Geobacillus thermodenitrificans (strain NG80-2) GN=groL PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 2.860e-31
Identity = 64/103 (62.14%), Postives = 84/103 (81.55%), Query Frame = 2
Query:  200 AKDIRFGVEARALMLKGVEELADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGTTCATVLTRAIFTEGCK 508
            AK+I+F  EAR  ML+GV++LADAVKVT+GPKGRNVV+E+ +G+P +T DGVT+AK IE +D  +N+GA LV +VA+ TND+AGDGTT ATVL +A+  EG K
Sbjct:    2 AKEIKFSEEARRAMLRGVDKLADAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDPFENMGAKLVAEVASKTNDIAGDGTTTATVLAQAMIREGLK 104          
BLAST of EY736244 vs. ExPASy Swiss-Prot
Match: CH60_DESDG (60 kDa chaperonin OS=Desulfovibrio desulfuricans (strain G20) GN=groL PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 2.860e-31
Identity = 64/104 (61.54%), Postives = 88/104 (84.62%), Query Frame = 2
Query:  197 AAKDIRFGVEARALMLKGVEELADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGTTCATVLTRAIFTEGCK 508
            A+K+I F  +AR  + +GV++LA+AVKVT+GPKGRNVVIE+S+GAP +TKDGV+VAK IE +DK +N+GA +VK+VA+ T+D+AGDGTT AT+L +AI+ EG K
Sbjct:    2 ASKEIVFDTKARERLARGVDKLANAVKVTLGPKGRNVVIEKSFGAPVITKDGVSVAKEIELEDKFENMGAQMVKEVASKTSDIAGDGTTTATILAQAIYKEGVK 105          
The following BLAST results are available for this feature:
BLAST of EY736244 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_RICRO2.860e-3165.3860 kDa chaperonin OS=Rickettsia rickettsii (strain... [more]
CH60_RICRI2.860e-3165.3860 kDa chaperonin (Fragment) OS=Rickettsia rickett... [more]
CH60_RICPU2.860e-3165.3860 kDa chaperonin OS=Rickettsia peacockii (strain ... [more]
CH60_RICCN2.860e-3165.3860 kDa chaperonin OS=Rickettsia conorii GN=groL PE... [more]
CH60_RICAE2.860e-3165.3860 kDa chaperonin OS=Rickettsia africae (strain ES... [more]
CH60_PSEA62.860e-3163.4660 kDa chaperonin OS=Pseudoalteromonas atlantica (... [more]
CH60_LACDB2.860e-3163.1160 kDa chaperonin OS=Lactobacillus delbrueckii sub... [more]
CH60_LACDA2.860e-3163.1160 kDa chaperonin OS=Lactobacillus delbrueckii sub... [more]
CH60_GEOTN2.860e-3162.1460 kDa chaperonin OS=Geobacillus thermodenitrifica... [more]
CH60_DESDG2.860e-3161.5460 kDa chaperonin OS=Desulfovibrio desulfuricans (... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-013-F12-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736244 ID=EY736244; Name=EY736244; organism=Citrus sinensis; type=EST; length=510bp
CACGCGTCCGCGGACGCGTGGGGTCGCCTCTCCTTCTATCTCTGCCACTA
GACTGTTACTCTCGGCTTCCTCTTCTCTGCAATTTTACGAAACTGCCACT
ATGTATCGTTTCGCTTCAAGCCTCGCTTCCAAAGCAAGGATCGCTAGGAA
CAGTACCCAGCAGATTGGAAATAGATTGAGTTGGTCCAGAAACTATGCTG
CCAAAGACATTAGATTTGGGGTTGAAGCTCGAGCTTTGATGCTGAAGGGT
GTTGAAGAGCTCGCCGATGCGGTCAAAGTCACCATGGGACCTAAGGGGCG
TAATGTGGTCATTGAACAAAGCTGGGGTGCTCCCAAGGTGACAAAAGATG
GTGTTACTGTTGCAAAGAGCATTGAATTCAAAGATAAAGTCAAGAACATT
GGTGCTAGCCTTGTGAAGCAAGTTGCTAATGCCACCAATGATGTTGCTGG
TGATGGAACTACCTGTGCAACAGTTCTTACCCGAGCAATATTTACAGAAG
GCTGCAAGTC
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