EY736244

Overview
NameEY736244
Unique NameEY736244
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length510
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY736244 vs. ExPASy Swiss-Prot
Match: CH60_HYDS0 (60 kDa chaperonin OS=Hydrogenobaculum sp. (strain Y04AAS1) GN=groL PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.792e-33
Identity = 71/104 (68.27%), Postives = 85/104 (81.73%), Query Frame = 2 
Query:  197 AAKDIRFGVEARALMLKGVEELADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGTTCATVLTRAIFTEGCK 508
            AAK + +G EARA +  GV++LA+AVKVT+GPKGR V+IE+ WG P VTKDGVTVAK IE KD+ +NIGA LVK+VA+ T DVAGDGTT ATVL +AIFTEG K
Sbjct:    2 AAKHVIYGEEARAKLKAGVDKLANAVKVTLGPKGREVIIEKKWGVPVVTKDGVTVAKEIELKDQFENIGAQLVKEVASKTADVAGDGTTTATVLAQAIFTEGLK 105
[Close]
BLAST of EY736244 vs. ExPASy Swiss-Prot
Match: CH60_GEOSM (60 kDa chaperonin OS=Geobacter sp. (strain M21) GN=groL PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.792e-33
Identity = 72/104 (69.23%), Postives = 87/104 (83.65%), Query Frame = 2 
Query:  197 AAKDIRFGVEARALMLKGVEELADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGTTCATVLTRAIFTEGCK 508
            AAK I+F  EAR  +LKGV  LADAVKVT+GPKGRNVVIE+S+GAP +TKDGVTVAK IE +DK +N+GA LVK+VA+ T+DVAGDGTT ATVL +AI+ +G K
Sbjct:    2 AAKLIKFDQEARNCILKGVNTLADAVKVTLGPKGRNVVIEKSYGAPLITKDGVTVAKEIELEDKFENMGAQLVKEVASKTSDVAGDGTTTATVLAQAIYRQGAK 105
[Close]
BLAST of EY736244 vs. ExPASy Swiss-Prot
Match: CH60_ESCF3 (60 kDa chaperonin OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=groL PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.792e-33
Identity = 68/104 (65.38%), Postives = 87/104 (83.65%), Query Frame = 2 
Query:  197 AAKDIRFGVEARALMLKGVEELADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGTTCATVLTRAIFTEGCK 508
            AAKD++FG +AR  ML+GV  LADAVKVT+GPKGRNVV+++S+GAP +TKDGV+VA+ IE +DK +N+GA +VK+VA+  ND AGDGTT ATVL +AI TEG K
Sbjct:    2 AAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDTAGDGTTTATVLAQAIITEGLK 105
[Close]
BLAST of EY736244 vs. ExPASy Swiss-Prot
Match: CH60_ENTS8 (60 kDa chaperonin OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=groL PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.792e-33
Identity = 68/104 (65.38%), Postives = 87/104 (83.65%), Query Frame = 2 
Query:  197 AAKDIRFGVEARALMLKGVEELADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGTTCATVLTRAIFTEGCK 508
            AAKD++FG +AR  ML+GV  LADAVKVT+GPKGRNVV+++S+GAP +TKDGV+VA+ IE +DK +N+GA +VK+VA+  ND AGDGTT ATVL +AI TEG K
Sbjct:    2 AAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLK 105
[Close]
BLAST of EY736244 vs. ExPASy Swiss-Prot
Match: CH60_ENTAS (60 kDa chaperonin (Fragment) OS=Enterobacter asburiae GN=groL PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.792e-33
Identity = 68/104 (65.38%), Postives = 87/104 (83.65%), Query Frame = 2 
Query:  197 AAKDIRFGVEARALMLKGVEELADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGTTCATVLTRAIFTEGCK 508
            AAKD++FG +AR  ML+GV  LADAVKVT+GPKGRNVV+++S+GAP +TKDGV+VA+ IE +DK +N+GA +VK+VA+  ND AGDGTT ATVL +AI TEG K
Sbjct:    2 AAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLK 105
[Close]
BLAST of EY736244 vs. ExPASy Swiss-Prot
Match: CH60_ENTAM (60 kDa chaperonin (Fragment) OS=Enterobacter amnigenus GN=groL PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.792e-33
Identity = 68/104 (65.38%), Postives = 87/104 (83.65%), Query Frame = 2 
Query:  197 AAKDIRFGVEARALMLKGVEELADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGTTCATVLTRAIFTEGCK 508
            AAKD++FG +AR  ML+GV  LADAVKVT+GPKGRNVV+++S+GAP +TKDGV+VA+ IE +DK +N+GA +VK+VA+  ND AGDGTT ATVL +AI TEG K
Sbjct:    2 AAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLK 105
[Close]
BLAST of EY736244 vs. ExPASy Swiss-Prot
Match: CH60_ENTAG (60 kDa chaperonin (Fragment) OS=Enterobacter agglomerans GN=groL PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.792e-33
Identity = 68/104 (65.38%), Postives = 87/104 (83.65%), Query Frame = 2 
Query:  197 AAKDIRFGVEARALMLKGVEELADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGTTCATVLTRAIFTEGCK 508
            AAKD++FG +AR  ML+GV  LADAVKVT+GPKGRNVV+++S+GAP +TKDGV+VA+ IE +DK +N+GA +VK+VA+  ND AGDGTT ATVL +AI TEG K
Sbjct:    2 AAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLK 105
[Close]
BLAST of EY736244 vs. ExPASy Swiss-Prot
Match: CH60_ENT38 (60 kDa chaperonin OS=Enterobacter sp. (strain 638) GN=groL PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.792e-33
Identity = 68/104 (65.38%), Postives = 87/104 (83.65%), Query Frame = 2 
Query:  197 AAKDIRFGVEARALMLKGVEELADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGTTCATVLTRAIFTEGCK 508
            AAKD++FG +AR  ML+GV  LADAVKVT+GPKGRNVV+++S+GAP +TKDGV+VA+ IE +DK +N+GA +VK+VA+  ND AGDGTT ATVL +AI TEG K
Sbjct:    2 AAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPAITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLK 105
[Close]
BLAST of EY736244 vs. ExPASy Swiss-Prot
Match: CH60_ECOUT (60 kDa chaperonin OS=Escherichia coli (strain UTI89 / UPEC) GN=groL PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.792e-33
Identity = 68/104 (65.38%), Postives = 87/104 (83.65%), Query Frame = 2 
Query:  197 AAKDIRFGVEARALMLKGVEELADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGTTCATVLTRAIFTEGCK 508
            AAKD++FG +AR  ML+GV  LADAVKVT+GPKGRNVV+++S+GAP +TKDGV+VA+ IE +DK +N+GA +VK+VA+  ND AGDGTT ATVL +AI TEG K
Sbjct:    2 AAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLK 105
[Close]
BLAST of EY736244 vs. ExPASy Swiss-Prot
Match: CH60_ECOSM (60 kDa chaperonin OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=groL PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.792e-33
Identity = 68/104 (65.38%), Postives = 87/104 (83.65%), Query Frame = 2 
Query:  197 AAKDIRFGVEARALMLKGVEELADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGTTCATVLTRAIFTEGCK 508
            AAKD++FG +AR  ML+GV  LADAVKVT+GPKGRNVV+++S+GAP +TKDGV+VA+ IE +DK +N+GA +VK+VA+  ND AGDGTT ATVL +AI TEG K
Sbjct:    2 AAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLK 105
The following BLAST results are available for this feature:
BLAST of EY736244 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_HYDS01.792e-3368.2760 kDa chaperonin OS=Hydrogenobaculum sp. (strain ... [more]
CH60_GEOSM1.792e-3369.2360 kDa chaperonin OS=Geobacter sp. (strain M21) GN... [more]
CH60_ESCF31.792e-3365.3860 kDa chaperonin OS=Escherichia fergusonii (strai... [more]
CH60_ENTS81.792e-3365.3860 kDa chaperonin OS=Enterobacter sakazakii (strai... [more]
CH60_ENTAS1.792e-3365.3860 kDa chaperonin (Fragment) OS=Enterobacter asbur... [more]
CH60_ENTAM1.792e-3365.3860 kDa chaperonin (Fragment) OS=Enterobacter amnig... [more]
CH60_ENTAG1.792e-3365.3860 kDa chaperonin (Fragment) OS=Enterobacter agglo... [more]
CH60_ENT381.792e-3365.3860 kDa chaperonin OS=Enterobacter sp. (strain 638)... [more]
CH60_ECOUT1.792e-3365.3860 kDa chaperonin OS=Escherichia coli (strain UTI8... [more]
CH60_ECOSM1.792e-3365.3860 kDa chaperonin OS=Escherichia coli (strain SMS-... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-013-F12-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736244 ID=EY736244; Name=EY736244; organism=Citrus sinensis; type=EST; length=510bp
CACGCGTCCGCGGACGCGTGGGGTCGCCTCTCCTTCTATCTCTGCCACTA
GACTGTTACTCTCGGCTTCCTCTTCTCTGCAATTTTACGAAACTGCCACT
ATGTATCGTTTCGCTTCAAGCCTCGCTTCCAAAGCAAGGATCGCTAGGAA
CAGTACCCAGCAGATTGGAAATAGATTGAGTTGGTCCAGAAACTATGCTG
CCAAAGACATTAGATTTGGGGTTGAAGCTCGAGCTTTGATGCTGAAGGGT
GTTGAAGAGCTCGCCGATGCGGTCAAAGTCACCATGGGACCTAAGGGGCG
TAATGTGGTCATTGAACAAAGCTGGGGTGCTCCCAAGGTGACAAAAGATG
GTGTTACTGTTGCAAAGAGCATTGAATTCAAAGATAAAGTCAAGAACATT
GGTGCTAGCCTTGTGAAGCAAGTTGCTAATGCCACCAATGATGTTGCTGG
TGATGGAACTACCTGTGCAACAGTTCTTACCCGAGCAATATTTACAGAAG
GCTGCAAGTC
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