EY736244

Overview
NameEY736244
Unique NameEY736244
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length510
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY736244 vs. ExPASy Swiss-Prot
Match: CH60_ACEP3 (60 kDa chaperonin OS=Acetobacter pasteurianus (strain NBRC 3283 / LMG 1513 / CCTM 1153) GN=groL PE=3 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 1.792e-33
Identity = 67/104 (64.42%), Postives = 89/104 (85.58%), Query Frame = 2 
Query:  197 AAKDIRFGVEARALMLKGVEELADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGTTCATVLTRAIFTEGCK 508
            AAKD++FG +AR  ML+GV+ LADAVKVT+GPKGRNVV+++S+GAP++TKDGV+VAK IE  DK +N+GA ++++VA+ TND+AGDGTT ATVL +AI  EG K
Sbjct:    2 AAKDVKFGADARQRMLRGVDILADAVKVTLGPKGRNVVLDKSFGAPRITKDGVSVAKEIELADKFENMGAQMLREVASKTNDIAGDGTTTATVLAQAIVREGHK 105
[Close]
BLAST of EY736244 vs. ExPASy Swiss-Prot
Match: CH602_POLNA (60 kDa chaperonin 2 OS=Polaromonas naphthalenivorans (strain CJ2) GN=groL2 PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.792e-33
Identity = 71/104 (68.27%), Postives = 89/104 (85.58%), Query Frame = 2 
Query:  197 AAKDIRFGVEARALMLKGVEELADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGTTCATVLTRAIFTEGCK 508
            AAKD+ FG EARA M++GV  LA+AVKVT+GPKGRNVV+E+S+GAP VTKDGV+VAK IE KDK++N+GA +VK+VA+ T+D+AGDGTT ATVL +AI  EG K
Sbjct:    2 AAKDVIFGGEARARMVEGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEIELKDKLQNMGAQMVKEVASKTSDIAGDGTTTATVLAQAIVHEGMK 105
[Close]
BLAST of EY736244 vs. ExPASy Swiss-Prot
Match: CH601_RHIEC (60 kDa chaperonin 1 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=groL1 PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.792e-33
Identity = 68/104 (65.38%), Postives = 89/104 (85.58%), Query Frame = 2 
Query:  197 AAKDIRFGVEARALMLKGVEELADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGTTCATVLTRAIFTEGCK 508
            AAK+I+FG  AR  ML+GV+ LADAVKVT+GPKGRNV+I++S+GAP++TKDGV+VAK IE +DK +N+GA +V++VA+ TND+AGDGTT ATVL +AI  EG K
Sbjct:    2 AAKEIKFGRTAREKMLRGVDILADAVKVTLGPKGRNVIIDKSFGAPRITKDGVSVAKEIELEDKFENMGAQMVREVASKTNDIAGDGTTTATVLAQAIVREGAK 105
[Close]
BLAST of EY736244 vs. ExPASy Swiss-Prot
Match: CH601_ECOK1 (60 kDa chaperonin 1 OS=Escherichia coli O1:K1 / APEC GN=groL1 PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.792e-33
Identity = 68/104 (65.38%), Postives = 87/104 (83.65%), Query Frame = 2 
Query:  197 AAKDIRFGVEARALMLKGVEELADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGTTCATVLTRAIFTEGCK 508
            AAKD++FG +AR  ML+GV  LADAVKVT+GPKGRNVV+++S+GAP +TKDGV+VA+ IE +DK +N+GA +VK+VA+  ND AGDGTT ATVL +AI TEG K
Sbjct:    2 AAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLK 105
[Close]
BLAST of EY736244 vs. ExPASy Swiss-Prot
Match: CH60_PELCD (60 kDa chaperonin OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=groL PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 2.340e-33
Identity = 68/104 (65.38%), Postives = 90/104 (86.54%), Query Frame = 2 
Query:  197 AAKDIRFGVEARALMLKGVEELADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGTTCATVLTRAIFTEGCK 508
            +AK+I+FG +AR+L+L GV +LADAVKVT+GPKGRNVVI++S+GAP +TKDGV+VAK IE ++K +N+GA LVK+VA+ T+DVAGDGTT ATVL + I+ EG K
Sbjct:    2 SAKEIKFGQDARSLILSGVNQLADAVKVTLGPKGRNVVIDRSFGAPLITKDGVSVAKEIELEEKFENMGAQLVKEVASKTSDVAGDGTTTATVLAQGIYREGVK 105
[Close]
BLAST of EY736244 vs. ExPASy Swiss-Prot
Match: CH60_BUCTC (60 kDa chaperonin OS=Buchnera aphidicola subsp. Tetraneura caerulescens GN=groL PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 2.340e-33
Identity = 68/104 (65.38%), Postives = 87/104 (83.65%), Query Frame = 2 
Query:  197 AAKDIRFGVEARALMLKGVEELADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGTTCATVLTRAIFTEGCK 508
            AAKD++FG EAR  ML+GV  LADAVKVT+GPKGRNVV+++S+GAP +TKDGV+VA+ IE +DK +N+GA +VK+VA+  NDVAGDGTT AT+L +AI  EG K
Sbjct:    2 AAKDVKFGNEARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPSITKDGVSVAREIELEDKFENMGAQMVKEVASKANDVAGDGTTTATLLAQAIVNEGLK 105
[Close]
BLAST of EY736244 vs. ExPASy Swiss-Prot
Match: CH60_ALTMD (60 kDa chaperonin OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=groL PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 2.340e-33
Identity = 69/104 (66.35%), Postives = 88/104 (84.62%), Query Frame = 2 
Query:  197 AAKDIRFGVEARALMLKGVEELADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGTTCATVLTRAIFTEGCK 508
            AAK++RFG +AR+ MLKGV  LA+AVKVT+GPKGRNVV+++S+GAP +TKDGV+VAK IE +DK +N+GA +VK+VA+  ND AGDGTT ATVL +AI TEG K
Sbjct:    2 AAKEVRFGDDARSKMLKGVNTLANAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAKEIELEDKFENMGAQMVKEVASKANDEAGDGTTTATVLAQAIVTEGLK 105
[Close]
BLAST of EY736244 vs. ExPASy Swiss-Prot
Match: CH602_AZOC5 (60 kDa chaperonin 2 OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=groL2 PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 2.340e-33
Identity = 69/104 (66.35%), Postives = 89/104 (85.58%), Query Frame = 2 
Query:  197 AAKDIRFGVEARALMLKGVEELADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGTTCATVLTRAIFTEGCK 508
            AAKD++F  +AR  ML+GV+ LA+AVKVT+GPKGRNVVIE+S+GAP++TKDGV+VAK IE +DK +N+GA LV++VA+ TND+AGDGTT ATVL +AI  EG K
Sbjct:    2 AAKDVKFAGDAREKMLRGVDILANAVKVTLGPKGRNVVIEKSFGAPRITKDGVSVAKEIELEDKFENLGAQLVREVASKTNDLAGDGTTTATVLAQAIVKEGSK 105
[Close]
BLAST of EY736244 vs. ExPASy Swiss-Prot
Match: CH601_VIBVY (60 kDa chaperonin 1 OS=Vibrio vulnificus (strain YJ016) GN=groL1 PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 2.340e-33
Identity = 69/104 (66.35%), Postives = 87/104 (83.65%), Query Frame = 2 
Query:  197 AAKDIRFGVEARALMLKGVEELADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGTTCATVLTRAIFTEGCK 508
            AAKD++FG +AR  ML+GV  LADAVKVT+GPKGRNVV+++S+GAP +TKDGV+VA+ IE +DK +N+GA +VKQVA+  NDVAGDGTT ATVL +AI  EG K
Sbjct:    2 AAKDVKFGNDARVKMLEGVNILADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFQNMGAQMVKQVASQANDVAGDGTTTATVLAQAIVNEGLK 105
[Close]
BLAST of EY736244 vs. ExPASy Swiss-Prot
Match: CH601_VIBVU (60 kDa chaperonin 1 OS=Vibrio vulnificus GN=groL1 PE=3 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 2.340e-33
Identity = 69/104 (66.35%), Postives = 87/104 (83.65%), Query Frame = 2 
Query:  197 AAKDIRFGVEARALMLKGVEELADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGTTCATVLTRAIFTEGCK 508
            AAKD++FG +AR  ML+GV  LADAVKVT+GPKGRNVV+++S+GAP +TKDGV+VA+ IE +DK +N+GA +VKQVA+  NDVAGDGTT ATVL +AI  EG K
Sbjct:    2 AAKDVKFGNDARVKMLEGVNILADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFQNMGAQMVKQVASQANDVAGDGTTTATVLAQAIVNEGLK 105
The following BLAST results are available for this feature:
BLAST of EY736244 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_ACEP31.792e-3364.4260 kDa chaperonin OS=Acetobacter pasteurianus (str... [more]
CH602_POLNA1.792e-3368.2760 kDa chaperonin 2 OS=Polaromonas naphthalenivora... [more]
CH601_RHIEC1.792e-3365.3860 kDa chaperonin 1 OS=Rhizobium etli (strain CFN ... [more]
CH601_ECOK11.792e-3365.3860 kDa chaperonin 1 OS=Escherichia coli O1:K1 / AP... [more]
CH60_PELCD2.340e-3365.3860 kDa chaperonin OS=Pelobacter carbinolicus (stra... [more]
CH60_BUCTC2.340e-3365.3860 kDa chaperonin OS=Buchnera aphidicola subsp. Te... [more]
CH60_ALTMD2.340e-3366.3560 kDa chaperonin OS=Alteromonas macleodii (strain... [more]
CH602_AZOC52.340e-3366.3560 kDa chaperonin 2 OS=Azorhizobium caulinodans (s... [more]
CH601_VIBVY2.340e-3366.3560 kDa chaperonin 1 OS=Vibrio vulnificus (strain Y... [more]
CH601_VIBVU2.340e-3366.3560 kDa chaperonin 1 OS=Vibrio vulnificus GN=groL1 ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-705-013-F12-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736244 ID=EY736244; Name=EY736244; organism=Citrus sinensis; type=EST; length=510bp
CACGCGTCCGCGGACGCGTGGGGTCGCCTCTCCTTCTATCTCTGCCACTA
GACTGTTACTCTCGGCTTCCTCTTCTCTGCAATTTTACGAAACTGCCACT
ATGTATCGTTTCGCTTCAAGCCTCGCTTCCAAAGCAAGGATCGCTAGGAA
CAGTACCCAGCAGATTGGAAATAGATTGAGTTGGTCCAGAAACTATGCTG
CCAAAGACATTAGATTTGGGGTTGAAGCTCGAGCTTTGATGCTGAAGGGT
GTTGAAGAGCTCGCCGATGCGGTCAAAGTCACCATGGGACCTAAGGGGCG
TAATGTGGTCATTGAACAAAGCTGGGGTGCTCCCAAGGTGACAAAAGATG
GTGTTACTGTTGCAAAGAGCATTGAATTCAAAGATAAAGTCAAGAACATT
GGTGCTAGCCTTGTGAAGCAAGTTGCTAATGCCACCAATGATGTTGCTGG
TGATGGAACTACCTGTGCAACAGTTCTTACCCGAGCAATATTTACAGAAG
GCTGCAAGTC
back to top