EY736213

Overview
NameEY736213
Unique NameEY736213
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736213 vs. ExPASy Swiss-Prot
Match: DNAJ2_STRAW (Chaperone protein dnaJ 2 OS=Streptomyces avermitilis GN=dnaJ2 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.197e-15
Identity = 40/79 (50.63%), Postives = 57/79 (72.15%), Query Frame = 2
Query:  155 TRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDP---EKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAG 382
            T YY +LGV ++AS +++KKA+++ A + HPD   DP   E+FKE+  AYEVLSDP+K+++YD  G D L +  GGGAG
Sbjct:    3 TDYYAVLGVRRDASQDEIKKAFRRLARELHPDVNPDPKTQERFKEINAAYEVLSDPQKKQVYD-LGGDPLSQSGGGGAG 80          
BLAST of EY736213 vs. ExPASy Swiss-Prot
Match: DNAJ2_STRAL (Chaperone protein dnaJ 2 OS=Streptomyces albus G GN=dnaJ2 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.197e-15
Identity = 40/79 (50.63%), Postives = 57/79 (72.15%), Query Frame = 2
Query:  155 TRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDP---EKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAG 382
            T YY +LGV ++AS +++KKA+++ A + HPD   DP   E+FKE+  AYEVLSDP+K+++YD  G D L +  GGGAG
Sbjct:    3 TDYYAVLGVRRDASQDEIKKAFRRLARELHPDVNPDPKTQERFKEINAAYEVLSDPQKKQVYD-LGGDPLSQNGGGGAG 80          
BLAST of EY736213 vs. ExPASy Swiss-Prot
Match: DNAJ_THEEB (Chaperone protein dnaJ OS=Thermosynechococcus elongatus (strain BP-1) GN=dnaJ PE=3 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 8.093e-15
Identity = 43/84 (51.19%), Postives = 57/84 (67.86%), Query Frame = 2
Query:  161 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDP---EKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHDPFDI 403
            +YEILGVS++A AE+LK+AY++ A K HPD   +P   EKFKE+ +AYEVLSDP+ R  YD++GE  +    G GA     F I
Sbjct:    5 FYEILGVSRSADAEELKRAYRRLARKYHPDVNKEPGAEEKFKEINRAYEVLSDPQARANYDRFGEAGVS---GVGAAGFSDFGI 85          
BLAST of EY736213 vs. ExPASy Swiss-Prot
Match: DNAJ_PROVI (Chaperone protein dnaJ OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.093e-15
Identity = 41/82 (50.00%), Postives = 56/82 (68.29%), Query Frame = 2
Query:  161 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGEDAL--KEGMGGGAGAH 388
            YYEILGV ++A  +++KKAY+K A+K HPDK  D     + FKE+ +AYEVLS+ +KR  YDQ+G   +      GGGAGA+
Sbjct:    5 YYEILGVGRSADKDEIKKAYRKLALKYHPDKNPDNKDAEDHFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSSAASGGGAGAY 86          
BLAST of EY736213 vs. ExPASy Swiss-Prot
Match: DNAJ_NATPD (Chaperone protein dnaJ OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.093e-15
Identity = 53/152 (34.87%), Postives = 77/152 (50.66%), Query Frame = 2
Query:  161 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDP---EKFKELAQAYEVLSDPEKREIYDQYGEDALKE-----------------GMGGG--AGAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSR 550
            +Y +LGVS++A  +++K+AY+K A + HPD   DP   EKFK++ +A EVL D EKR +YDQ G +  +E                 GMGGG   G +D F+                         D+   LKV LED Y G +K+L+++R
Sbjct:    5 FYSVLGVSRDADEDEIKQAYRKKASEYHPDVSDDPNAEEKFKQVKKAKEVLLDDEKRRMYDQMGHERFQEAEKRGATDTDRGRGGMGGMGGGGMGGMNDIFE------QFFGGGGRSQSRSGPRQGSDLKTRLKVDLEDAYHGVTKQLTVTR 150          
BLAST of EY736213 vs. ExPASy Swiss-Prot
Match: DNAJ_METSS (Chaperone protein dnaJ OS=Methylovorus sp. (strain SS1 / DSM 11726) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.093e-15
Identity = 39/76 (51.32%), Postives = 52/76 (68.42%), Query Frame = 2
Query:  161 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGG 376
            YYE+LGV+++AS E++KK+Y+K A+K HPD+  D     E FKE  +AYEVLSD +KR  YDQYG   +    G G
Sbjct:    6 YYEVLGVNRDASDEEIKKSYRKLAMKYHPDRNPDNPKAEESFKEAKEAYEVLSDEQKRAAYDQYGHAGVDPSAGPG 81          
BLAST of EY736213 vs. ExPASy Swiss-Prot
Match: DNAJ_LEPCP (Chaperone protein dnaJ OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.093e-15
Identity = 40/77 (51.95%), Postives = 53/77 (68.83%), Query Frame = 2
Query:  161 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKG-GD-----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGG 373
            YYE+LGV K AS +++KKAY+K A+K+HPD+  GD      EKFKE  +AYE+LSD +KR  YDQ+G   +    GG
Sbjct:    6 YYEVLGVGKTASEDEIKKAYRKLAMKHHPDRNQGDGAKASEEKFKEAKEAYEMLSDAQKRAAYDQFGHAGVDPNAGG 82          
BLAST of EY736213 vs. ExPASy Swiss-Prot
Match: DNAJ_LACDB (Chaperone protein dnaJ OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC BAA-365) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.093e-15
Identity = 40/82 (48.78%), Postives = 57/82 (69.51%), Query Frame = 2
Query:  152 NTRYYEILGVSKNASAEDLKKAYKKAAIKNHPD---KGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAH 388
            N  YY++LGVS++AS  ++ KAY+K A K HPD   + G  EK+KE+ +AYEVL DP+KR+ YDQ+G+  +  G GG  G +
Sbjct:    4 NRDYYDVLGVSRDASDAEISKAYRKLAKKYHPDLNHEAGAEEKYKEVNEAYEVLHDPQKRQQYDQFGQAGM-NGQGGFGGQY 84          
BLAST of EY736213 vs. ExPASy Swiss-Prot
Match: DNAJ_LACDA (Chaperone protein dnaJ OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.093e-15
Identity = 40/82 (48.78%), Postives = 57/82 (69.51%), Query Frame = 2
Query:  152 NTRYYEILGVSKNASAEDLKKAYKKAAIKNHPD---KGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAH 388
            N  YY++LGVS++AS  ++ KAY+K A K HPD   + G  EK+KE+ +AYEVL DP+KR+ YDQ+G+  +  G GG  G +
Sbjct:    4 NRDYYDVLGVSRDASDAEISKAYRKLAKKYHPDLNHEAGAEEKYKEVNEAYEVLHDPQKRQQYDQFGQAGM-NGQGGFGGQY 84          
BLAST of EY736213 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLL2 (Chaperone protein dnaJ OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.093e-15
Identity = 39/78 (50.00%), Postives = 54/78 (69.23%), Query Frame = 2
Query:  161 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAG 382
            YYE+LGVS++AS +++KKAY+K A++ HPDK  D     E FKE+ +AYEVLS+ +KR  YDQ+G   +      GAG
Sbjct:    5 YYEVLGVSRSASKDEIKKAYRKLALQYHPDKNPDNKDAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSSAASGAG 82          
The following BLAST results are available for this feature:
BLAST of EY736213 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ2_STRAW6.197e-1550.63Chaperone protein dnaJ 2 OS=Streptomyces avermitil... [more]
DNAJ2_STRAL6.197e-1550.63Chaperone protein dnaJ 2 OS=Streptomyces albus G G... [more]
DNAJ_THEEB8.093e-1551.19Chaperone protein dnaJ OS=Thermosynechococcus elon... [more]
DNAJ_PROVI8.093e-1550.00Chaperone protein dnaJ OS=Prosthecochloris vibriof... [more]
DNAJ_NATPD8.093e-1534.87Chaperone protein dnaJ OS=Natronomonas pharaonis (... [more]
DNAJ_METSS8.093e-1551.32Chaperone protein dnaJ OS=Methylovorus sp. (strain... [more]
DNAJ_LEPCP8.093e-1551.95Chaperone protein dnaJ OS=Leptothrix cholodnii (st... [more]
DNAJ_LACDB8.093e-1548.78Chaperone protein dnaJ OS=Lactobacillus delbruecki... [more]
DNAJ_LACDA8.093e-1548.78Chaperone protein dnaJ OS=Lactobacillus delbruecki... [more]
DNAJ_CHLL28.093e-1550.00Chaperone protein dnaJ OS=Chlorobium limicola (str... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-705-013-C11-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736213 ID=EY736213; Name=EY736213; organism=Citrus sinensis; type=EST; length=873bp
CACGCGTCCGCCAGGTTTATTCCTTGGCTTTTGGGGGCTCTCCTGTAGCG
TCTCCGCGAGAGAAATAATGTTCTGGGTCTGTTTCGTTTCTGTGGATTCC
TGTTAAGAAACTCAAAACAAGATGTTTGGAAGAGCACCGAAGAAGAGCAA
TAATACGAGGTACTATGAGATCCTGGGGGTGTCCAAGAACGCTTCCGCTG
AGGACTTGAAGAAGGCTTATAAAAAAGCTGCCATCAAGAATCATCCCGAC
AAGGGCGGCGATCCTGAGAAGTTTAAAGAGTTGGCTCAGGCTTACGAGGT
TCTGAGTGATCCTGAGAAGCGTGAGATATATGATCAGTACGGTGAGGATG
CACTCAAGGAAGGAATGGGTGGTGGCGCTGGCGCCCATGACCCGTTTGAT
ATCTTTTCGTCTTTCTTTGGCGGCAGCCCATTCGGAGGTGGTANCAGCAG
GGGACGGANACAGAGGCGGGGCGAGGACGTGGTTCATCCTTTGAAGGTGT
CCTTGGAGGATCTTTATCTGGGTACCTCGAAGAAGCTCTCACTTTCGCGG
AATGTGATATGCTCGAAGTGCAGTGGCAAAGGGTCNAAATCTGGCGCTTC
GATGAAGTGTTCTGGTTGCCACGGTACGGTATGAAGGTCTCCATAAGGCA
CCTAGGACCCTCTATGATTCAGCAGATCCACCATCCTTGCAATGAATGGC
AGGGTGACGGGTGAGAACGTCAACGATGAAGATCGCTGGCCTCACGGCAG
GGCGAAGAACGCTGTCCGGGGGGAGCAGCGGGGGGAAGGTGAGGGGGGAG
AGGGGCTCCGCCATGGGCGAGAGGATGGCTTCCCTGCGGAGGCAAGGGAC
GCGGGGGGTCGCTCGCGGGAGAG
back to top